| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2387 |
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| Symbol | carA |
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| ID | 5714043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2520801 |
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| End bp | 2521970 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641268312 |
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| Product | carbamoyl phosphate synthase small subunit |
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| Protein accession | YP_001533724 |
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| Protein GI | 159044930 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0953377 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.858607 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCCG CCCCCGACAC CCCGACCGCC TGCCTCGTGC TCGCCGATGG CACGGTCTTC
TACGGGCGCG GGTTCGGCGC GGTCGGCACG ACCTCGGCGG AGCTGTGCTT CAACACCGCC
ATGACCGGCT ACCAGGAAAT CATGACCGAC CCCTCCTATG CGGGTCAGGT CGTGACCTTC
ACCTTTCCCC ATATCGGCAA CACGGGCGTG ACCGCCGAGG ATGACGAGGC CGCCGACCCC
GTCGCCGCAG GCATGGTGGT CAAATGGGAC CCGAGCGAAC CCTCGAACTG GCGCGCGCAA
GGCAAGCTGA CCGAGTGGCT GACCCGCACG GGCCGGATCG GGATCGGCGG CGTGGACACG
CGGCGCCTGA CCCGGCAGAT CCGCCAGCAG GGCGCGCCCC ATGTGGCCCT GGCCCACGAC
CCGGAAGGGA ATTTCGACCT TGAAGCCCTC GTGGCCCAGG CCCGCGCCTT TGCCGGGCTG
GAGGGGGTCG ATCTCGCCCG GGAGGTCACC TGCGCGCAAT CCTACCGCTG GGACGAGCAA
CGCTGGGCCT GGCCCGAGGG CTACACCCGC CGAACCACAC CGGGCCACAA GGTCGTGGCC
CTGGATTACG GCGCGAAACG CAACATCCTG CGCTGCCTGG CCTCGGCGGG CTGCGACGTG
ACGGTGATGC CCGCCACCAG CACCGCCGAA GACGTGCTGG CCCAGAACCC CGACGGCGTG
TTCCTGTCCA ACGGTCCCGG CGATCCGGCG GCCACCGGGA AATACGCGGT CCCGATGATC
AAGGGCGTGC TGGAGGCCTC GGACGTGCCG GTCTTCGGCA TCTGTCTCGG CCACCAGATG
CTGGCCCTGG CGCTCGGCGC ACAGACCGTG AAGATGAACC ACGGCCATCA CGGCGCCAAC
CACCCAGTAA AGGATCTGGA AACCGGCAAG GTCGAGATCA CCTCGATGAA CCACGGCTTC
ACCGTGGACA GCCAGACCCT GCCCCACGGC GTGGTCGAAA CCCACAGGTC GCTCTTCGAC
GGGTCGAACT GCGGCATCCG CATGACCGAC CGCCCGGTTT TCTCGGTGCA GTACCACCCC
GAGGCCAGCC CCGGCCCGCA AGACAGCTAC TATCTGTTCG AGCGGTTCGC TGCGGCCATG
GCTGCGCGCC GTGCAGTTAC GGCGGGCTAA
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| Protein sequence | MPAAPDTPTA CLVLADGTVF YGRGFGAVGT TSAELCFNTA MTGYQEIMTD PSYAGQVVTF
TFPHIGNTGV TAEDDEAADP VAAGMVVKWD PSEPSNWRAQ GKLTEWLTRT GRIGIGGVDT
RRLTRQIRQQ GAPHVALAHD PEGNFDLEAL VAQARAFAGL EGVDLAREVT CAQSYRWDEQ
RWAWPEGYTR RTTPGHKVVA LDYGAKRNIL RCLASAGCDV TVMPATSTAE DVLAQNPDGV
FLSNGPGDPA ATGKYAVPMI KGVLEASDVP VFGICLGHQM LALALGAQTV KMNHGHHGAN
HPVKDLETGK VEITSMNHGF TVDSQTLPHG VVETHRSLFD GSNCGIRMTD RPVFSVQYHP
EASPGPQDSY YLFERFAAAM AARRAVTAG
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