| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4142 |
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| Symbol | |
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| ID | 3911950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 4716515 |
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| End bp | 4717708 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637886046 |
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| Product | carbamoyl phosphate synthase small subunit |
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| Protein accession | YP_487745 |
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| Protein GI | 86751249 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.164526 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAATT CAGCATCCAA TCCCGCCTGG CCGGACCACA AACCGACCGC GCTGCTCGTG
CTCGCCGATG GCACCGTGTT CGAGGGCTTC GGCCTCGGCG CGGAGGGCCA CGCCGTCGGC
GAGGTCTGCT TCAACACCGC GATGACCGGC TATGAGGAGA TCCTCACCGA CCCGTCCTAT
GCCGGCCAGC TCATCACCTT CACCTTCCCG CATATCGGCA ATGTCGGCAC CAACGACGAG
GATATCGAGA CGGTGAACAT GGCGGCGACG CCGGGCGCGC GCGGCGTGAT CCTGCGCGAC
GCCATCACCG ACCCGTCGAA CTATCGCTCG TCGCGGCATC TCGACGGCTG GCTGAAAGCG
CGCGGCATCA TCGGCCTGTC GGGCATCGAC ACCCGCGCCC TGACCGCGCT GATCCGCGAC
AAGGGCATGC CGAATGCGGT GATCGCCCAT GCGCCGGACG GCAAGTTCGA CTTGCACGCG
CTGAAGGAAG AAGCCCGCGA ATGGCCCGGC CTCGAAGGCA TGGACCTGGT GCCGATGGTG
ACCTCGGCGC AGCGCTTCAG CTGGGACGAG ACGCCGTGGG CCTGGGGCGA AGGCTTCGGC
CGGCAGGACA ATCCGGAATT CCACGTCGTG GCGATCGACT ACGGCGTCAA GCGCAACATC
CTGCGGCTGC TCGCCGGCGA AGGCTGCAAG GTCACGGTGG TGCCGGCGAC CACCTCGGCC
GACGACATCC TGGCGCTGAA GCCGGACGGC GTGTTCCTGT CGAACGGCCC GGGCGACCCG
GCGGCAACCG GCAAATACGC GGTGCCGGTG ATCCAGCAGG TGATCAGTTC CGGCGTGCCG
ACCTTCGGCA TTTGTCTCGG CCACCAGATG CTCGGCCTCG CGCTCGGCGG CAAGACCGTG
AAGATGCATC AGGGCCACCA CGGCGCCAAT CATCCGGTCA AGGATCTCAC CACCGGCAAG
GTCGAGATCA CCTCGATGAA CCACGGCTTC GCGGTCGACA AGACCACGCT GCCGGCCAAT
GTGCAGCAGA CCCACGTGTC GCTGTTCGAC GACAGCAATT GCGGCATCGC GCTGTCCGAC
CGGCCGGTGT TCTCGGTGCA GTACCACCCG GAAGCCTCGC CGGGCCCGCG CGACTCGCAT
TATCTGTTCC GCCGGTTCTC GGACCTGATG CGGGCGAAGA AGAGCGCGGC GTAA
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| Protein sequence | MTNSASNPAW PDHKPTALLV LADGTVFEGF GLGAEGHAVG EVCFNTAMTG YEEILTDPSY
AGQLITFTFP HIGNVGTNDE DIETVNMAAT PGARGVILRD AITDPSNYRS SRHLDGWLKA
RGIIGLSGID TRALTALIRD KGMPNAVIAH APDGKFDLHA LKEEAREWPG LEGMDLVPMV
TSAQRFSWDE TPWAWGEGFG RQDNPEFHVV AIDYGVKRNI LRLLAGEGCK VTVVPATTSA
DDILALKPDG VFLSNGPGDP AATGKYAVPV IQQVISSGVP TFGICLGHQM LGLALGGKTV
KMHQGHHGAN HPVKDLTTGK VEITSMNHGF AVDKTTLPAN VQQTHVSLFD DSNCGIALSD
RPVFSVQYHP EASPGPRDSH YLFRRFSDLM RAKKSAA
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