| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1250 |
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| Symbol | |
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| ID | 6274736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 1500452 |
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| End bp | 1501570 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642613307 |
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| Product | carbamoyl-phosphate synthase, small subunit |
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| Protein accession | YP_001877856 |
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| Protein GI | 187735744 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGCCA TTCTCGCACT GGAAGACGGA AGCGTCTTCA TCGGTTCGCA CTTCGGGGCC
ACGGGCACGG AAGTGGGGGA AGCCTGCTTC AACACGTCCA TGACCGGCTA TCAGGAAGTA
TTGACGGATC CGTCCTACAG CGGCCAGATC GTCACCATGA CTTATCCTCT GATCGGCAAT
TACGGCGTCA ACCCGGAAGA CGGGGAATCA GGCAAAGCGC AGGTCAGCGG CTTTGTGGTG
GCGGAACTGG CGAAAGTCCA CTCCAACTGG CGTGCCACGG AATCCCTGGG CCCGTGGCTG
GAAAAACAGG GCGTCATCGG CATTGAAGGG GTGGATACCC GCAAAATCGC CAAGCATCTG
CGCTCCGCCG GAGCCATGCG CGCCTGCCTC ACCACGGAGC TGACTCCGGA GGAAGCCGTG
GAAGCAGCCA GAAACGCCCC CTCCATGGAA GGCTGCAATA TCGTGGACAA AATCGGTTCC
CACCCCATGA CACCGGAGGA AGTGGACGCG CTGGTTACGG GAAAAACTCT GCCCCCTGCG
GAATACGACA TCGTCGCCTT TGACTTCGGC ATTAAATACA ACATCCTGCG CCAGTTGAGG
GAAAACGGCT TCCGCGTAAC CGTAGTTCCC GCCCACACGA CGGCGGAGGA AGTGCTTGCC
ATGAACCCGG ACGGCGTCTT TCTTTCCAAT GGTCCGGGAG ATCCCGCCAC GCTGACGGAC
ATTCACCGGG AAGTAGCTGC ATTGATTGGG AAAGTGCCCA TGTTCGGCAT CTGCCTGGGC
CACCAGATTA TTTCCCACGC GCTGGGAGCG AAAACCTTCA AGCTGAAGTT CGGGCACCGT
GGAGCGAACC ATCCGGTCAA AGATTTGAAA ACGGGTAAAA TCAGCATTAC GTCCCAGAAC
CACGGTTTTG CCGTGGATCC GGACACCGTG CCGGACGACG TGGAAATAAC GCTGATCAAT
CTGAATGACA ATACCGTGGA AGGCATCGCC CACAGGACGC TTCCCGTATT CAGCGTGCAA
TACCACCCGG AAGCGGCGCC CGGCCCCAGA GACCCCCAGT ATCTGTTCCG AGATTTCAGG
AAAATGATTG CGGCCAGCAA GCGGCAACAT GCCCGCTGA
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| Protein sequence | MRAILALEDG SVFIGSHFGA TGTEVGEACF NTSMTGYQEV LTDPSYSGQI VTMTYPLIGN
YGVNPEDGES GKAQVSGFVV AELAKVHSNW RATESLGPWL EKQGVIGIEG VDTRKIAKHL
RSAGAMRACL TTELTPEEAV EAARNAPSME GCNIVDKIGS HPMTPEEVDA LVTGKTLPPA
EYDIVAFDFG IKYNILRQLR ENGFRVTVVP AHTTAEEVLA MNPDGVFLSN GPGDPATLTD
IHREVAALIG KVPMFGICLG HQIISHALGA KTFKLKFGHR GANHPVKDLK TGKISITSQN
HGFAVDPDTV PDDVEITLIN LNDNTVEGIA HRTLPVFSVQ YHPEAAPGPR DPQYLFRDFR
KMIAASKRQH AR
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