| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1071 |
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| Symbol | |
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| ID | 8418896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1262173 |
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| End bp | 1263282 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645037643 |
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| Product | carbamoyl-phosphate synthase, small subunit |
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| Protein accession | YP_003197937 |
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| Protein GI | 258405195 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0749952 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.228018 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCGA TTTTAGCTTT GGAAGACGGC ACCGTCTTTC ACGGAACAAG TTTTACCGGC
GACGGAGAGG CCACGGGGGA AGTCATCTTC AATACCGGCA TGACCGGCTA TCAGGAGATC
CTGACCGACC CCTCCTATCA CCGCCAGATG GTCTGCATGA CCTACCCGCA CATCGGGAAC
TACGGGATCA ATCCGGAGGA CATCGAATCC GACCGGATCC GGGTTGCAGC CTTCATAGTC
AAGGAATGCT GCAAAGAACC CTCAAACTGG CGGGCCACCG AAACTCTGCC CAATTATCTT
TCCCGGCAGG GAGTCATGGG CATCGAAGGG ATCGACACCC GGGCCCTGAC CCGCCATATC
CGTCTCAATG GCGCCATGCG CGGCGTTATG ACCACCACGG ATGATCCAGC CACCGCCGTG
GACAAGGCCC GGGCCATCCC GACCATGCAG GGGTTGAATC TGGCCGGCGA CGTCAGTTGC
CGGAGCCCGT TTTTCTGGAC TGCCGACGGC CCGGTTGCAA CCGACTGGGA CTCCCTCCGT
TGGCCCACTT CAGGTCCCAA GGTCGCCGTC TATGACTTTG GAGTAAAGTA CAACATCCTC
AGAGAACTGA GCTGCCAGGG GATACAGCCC CTTGTGGTCC CTGCGGACAC CCCCGCGGCC
CGAATCAGAG AACTCGGCGT TGACGGGGTT TTCCTCTCCA ACGGCCCCGG CGATCCTGAG
CCGGTGGAGC AGGCCATCGA GGCTATCCGG GACCTGGCTC AGGACACCCC CATCGGTGGC
ATCTGTCTGG GGCACCAGCT CCTGGCCCTG GCCCTGGGTG GACGCACCTA CAAACTCAAA
TTCGGCCACC ACGGCTGCAA TCATCCGGTA CAGGACAGCA CCACCGGGGT GATTGAAATC
TCCTCCCAAA ACCACGGTTT TTGCGCCGAT GTCTCCATGC TTGAAGACAT CACCGCCACC
CACGTCAATC TCAACGACCA GACCTTGGAA GGTTTCAGGC ATCGGCACAA ACCGCTGATG
GCTGTGCAAT ACCACCCTGA AGCCGCTCCG GGGCCCAACG ACGCCAAACC CTTCTTCCGG
CGATTCGCGC AGATGCTCAC GGTGCAATAA
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| Protein sequence | MRAILALEDG TVFHGTSFTG DGEATGEVIF NTGMTGYQEI LTDPSYHRQM VCMTYPHIGN
YGINPEDIES DRIRVAAFIV KECCKEPSNW RATETLPNYL SRQGVMGIEG IDTRALTRHI
RLNGAMRGVM TTTDDPATAV DKARAIPTMQ GLNLAGDVSC RSPFFWTADG PVATDWDSLR
WPTSGPKVAV YDFGVKYNIL RELSCQGIQP LVVPADTPAA RIRELGVDGV FLSNGPGDPE
PVEQAIEAIR DLAQDTPIGG ICLGHQLLAL ALGGRTYKLK FGHHGCNHPV QDSTTGVIEI
SSQNHGFCAD VSMLEDITAT HVNLNDQTLE GFRHRHKPLM AVQYHPEAAP GPNDAKPFFR
RFAQMLTVQ
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