Gene PMN2A_0259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0259 
Symbol 
ID3605631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp802428 
End bp803582 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content35% 
IMG OID637687117 
Productcarbamoyl phosphate synthase small subunit 
Protein accessionYP_291454 
Protein GI72382099 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0505] Carbamoylphosphate synthase small subunit 
TIGRFAM ID[TIGR01368] carbamoyl-phosphate synthase, small subunit 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTTTG ATACTGATAG CTCTGCAATT TTGTTATTAG AGGATGGGAC ATATTTTGAA 
GGATTATCTT TTGGTGCGGT TGGAACTATT TCTGGTGAAG TCGTATTTAA TACAGGTATG
ACAGGTTATC AGGAGGTCAT TACTGATCCA AGTTATTATG GTCAACTTAT TACGTTTACC
TATCCAGAGA TTGGAAATAC TGGAGTAAAT TATGAGGATA ATGAATCATC GCATCCCTCA
GTTAAAGGTG TGATAGCTCG TCAAATATCC AAAACTCCCA GTAACTGGAG ACATGAAATT
TCGTTTGAAA ATTGGTTAAA CGATGAAAAA GTTGTTGGAA TTCATGGAAT AGATACAAGA
TCACTTGTTA GGCATATAAG AGAGTCAGGT TCTTTGAATG GAATTATTTC ATCAGAGTCA
AAATATTCAA TCGCTGAATT ATTTTCACTT TTAAAAAAAT CTCCTTCAAT GAGTGGTCTT
AATCTTGTCG ATAAAGTAAC AACAAAAAGA GCTTTTAATG CTAATTCAAG TTGTCCTGTT
GCATTTGATA TGAGAATTAA AAATACTCAA ACAATTCCAT ACAAAGTTGT TGCTATAGAT
TTTGGGATAA AGCAATCGAT ATTGGATCGA CTAGTTGCCC ATGGTTGTGA AGTAACTGTC
TTGCCTGCAA GTGCTGAAAT GACCGATGTA TTAGCTTTAT CCCCTGAAGG TGTTTTTCTT
TCCAATGGTC CTGGTGATCC TTCCACCGTC CATAGTGGTA TTAATCTTGC TAAAGATTTA
ATTGAATATA AAAAACTACC TGTTTTTGGA ATCTGCTTAG GCCATCAAAT CCTTGGATTG
GCTTTAGGTG GTAAAACTTT TAAACTTTCT TATGGACATA GAGGACTAAA TCATCCATGT
GGATTGAACG GAAAAGTTGA AATTACTAGT CAAAACCATG GATTTGCTTT GAATTCAGAA
TCTTTAAATT CCGAGAAAAT AAAAATCACC AGATTAAATT TAAACGACCA AACAGTTGCT
GCTATTTCTG TTATTGATAG GCCTTTCTTT GGTGTTCAAT ATCACCCCGA AGCGAGCCCT
GGTCCTCATG ATGCTGATCA TCATTTTAAT CATTTCGTAA CCTTAATAGA AGAACGACGA
AGAATCGTGG ATTAA
 
Protein sequence
MFFDTDSSAI LLLEDGTYFE GLSFGAVGTI SGEVVFNTGM TGYQEVITDP SYYGQLITFT 
YPEIGNTGVN YEDNESSHPS VKGVIARQIS KTPSNWRHEI SFENWLNDEK VVGIHGIDTR
SLVRHIRESG SLNGIISSES KYSIAELFSL LKKSPSMSGL NLVDKVTTKR AFNANSSCPV
AFDMRIKNTQ TIPYKVVAID FGIKQSILDR LVAHGCEVTV LPASAEMTDV LALSPEGVFL
SNGPGDPSTV HSGINLAKDL IEYKKLPVFG ICLGHQILGL ALGGKTFKLS YGHRGLNHPC
GLNGKVEITS QNHGFALNSE SLNSEKIKIT RLNLNDQTVA AISVIDRPFF GVQYHPEASP
GPHDADHHFN HFVTLIEERR RIVD