Gene Dhaf_3203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3203 
Symbol 
ID7260219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp3431860 
End bp3432966 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content51% 
IMG OID643563126 
Productcarbamoyl-phosphate synthase, small subunit 
Protein accessionYP_002459659 
Protein GI219669224 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0505] Carbamoylphosphate synthase small subunit 
TIGRFAM ID[TIGR01368] carbamoyl-phosphate synthase, small subunit 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAGGCTG CATTAGTATT AGAAAACGGA AAAATATTCA GAGGAGAGTC CTTTGGCGCC 
GGCGGTGAAA TTCAGGGAGA GGTGGTCTTC AATACAGGGA TGACCGGCTA TCAGGAAGTC 
CTCACCGATC CTTCCTATAA GGGACAGATG GTATGCATGA CCTATCCGCT GATCGGTAAC 
TACGGCATCA ATTCCTTAGA TAATCAGTCC CCACAGATCC AGGTCCAGGG ATTTATCGTC 
AAAGAAGCAG CCCGTAACCC CCATCATTGG CAACTGGAAA AGAATATCTC CAGAGCCTTG 
GCTCAGGCAG GGGTTGTCGG AATCAAGGGT ATTGATACCC GGGCCTTAAC CCGCATTATC 
CGGGAGCATG GCGTGTTGCG GGGAATGATT ACCACAGAAC TTGGGGAGCT GGACCAAAAA 
GCACTGGAGC TGAAGAACTG GGAGATTCCT CAGGATGCAG TGGCACAGGT GAGCACCAGG 
GAGACCTACA AGCTGCCGCC CCTGGGCAAA ACGGATTCCC GGAAACCTTT CCATGTGGTG 
GTGATGGACT TTGGCATTAA AAGCAGTATT CTCAGGGCCA TGCAGGAAGA AGGCTATGCC 
CTGACTGTGG TTCCTTACTC TGCTTCTGCT CAGGAGATTA TTGCTCTGAA ACCGGATGGT 
GTTTTCCTCT CCAATGGCCC TGGGGACCCT AAGGATGTGG CGGTTGGAAT TAAGACCATT 
GGCGGATTCG TGAACAAGCT TCCTGTCTTT GGGATTTGCC TGGGGCATCA GCTCCTGACC 
TTAGCTTTAG GCGGGGACAC CTATAAGCTT AAATACGGGC ATCGGGGAGG TAATCAGCCC 
GTTCAGGATT TACGCACGAA AAAAGTCCAT ATCACTTCGC AAAATCATGG CTATGCTGTG 
GCTGAGGGGA GTTTGGCCGA TACCCTTCTG GAAGTCACCC ATCTCAATCT GAATGATCAG 
ACCGTAGAAG GTGTCCGGCA TAAGGAGCTC CCGGTATTTT CCGTGCAGTA TCACCCGGAG 
GCCGGACCGG GCCCTAACGA CTCACTCTAT CTTTTTAAAG AGTTTTCCAC CTTGATGACG 
GAATGGAGGA TACATCATGC CACTTAA
 
Protein sequence
MQAALVLENG KIFRGESFGA GGEIQGEVVF NTGMTGYQEV LTDPSYKGQM VCMTYPLIGN 
YGINSLDNQS PQIQVQGFIV KEAARNPHHW QLEKNISRAL AQAGVVGIKG IDTRALTRII 
REHGVLRGMI TTELGELDQK ALELKNWEIP QDAVAQVSTR ETYKLPPLGK TDSRKPFHVV 
VMDFGIKSSI LRAMQEEGYA LTVVPYSASA QEIIALKPDG VFLSNGPGDP KDVAVGIKTI 
GGFVNKLPVF GICLGHQLLT LALGGDTYKL KYGHRGGNQP VQDLRTKKVH ITSQNHGYAV 
AEGSLADTLL EVTHLNLNDQ TVEGVRHKEL PVFSVQYHPE AGPGPNDSLY LFKEFSTLMT 
EWRIHHAT