| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2122 |
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| Symbol | |
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| ID | 3774341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 2202560 |
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| End bp | 2203735 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637800567 |
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| Product | carbamoyl phosphate synthase small subunit |
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| Protein accession | YP_401139 |
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| Protein GI | 81300931 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.618886 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTCGGA TCTCGGGCTT TTGCTGCGCT ATGTCCCTTG CTGAACGCCA AGCTGCTCTG
CTCGTCTTGG CTGACGGATC CGTATTCCAT GGTTACGCCT GCGGGGCGGC GGGAACGGTC
ATCGGTGAAG TTGTCTTCAA CACCGGCATG ACCGGCTATC AAGAAGTGCT GACAGACCCG
AGCTACTGTG GGCAGATTGT CAGCTTTACC TATCCCGAGC TGGGCAACAC CGGGGTCAAC
CCCGAAGACG AAGAGTCTGC CCGGCCTCAA GTCAGCGGCT TGATTGCTCG TAATGTTGCT
CGCCGCCACA GCAACTGGCG GGCCGATCGC TCCCTGCCTG ACTATTTGCA ACAGCACAAC
ATTGTTGGCA TCTACGGCAT CGACACCCGC GCCCTCACGC AACATTTGCG ATCGACGGGG
GCGATGAATG GCGGCATCTC CACAACTATT TTGGATCCTG AAGAACTCTG GGCAGAAGTC
AAAGCCGCCC CATCCATGGA AGGGTTGAAT TTGGTCGATC AAGTCACGAC CGATCGCCCC
TACGAGTGGC AAACTCCCAC CAGTCAAACC TGGGAATTTA TTGAAGGGCC AACCACAGAG
TCCCTGACAG TTGTCGCCAT CGACTTCGGC GTGAAGCGCA ATATCCTGCG CCGCTTGGCC
AGCTATGGTT GCCGTGTGAT CGTGGTTCCG GCCGATACGC CGATCGAAGA AATCCTGCGG
CACGAGCCAG ATGGTGTCTT TCTCTCCAAT GGCCCTGGCG ATCCAGCCAC GGTCAAAAAT
GGGATCAGCA CCGCCCAAGC ACTCCTGCAA ACTGGACTGC CGTTGTTTGG GATTTGCCTC
GGGCACCAGA TTCTGGGGTT AGCCTTGGGG GCTCAAACCT TCAAGCTCAA GTTTGGCCAC
CGGGGGCTCA ACCACCCCTG TGGCTTGTCC CAGCAGGTCG AGATCACCAG CCAAAACCAC
GGCTTTGCGA TCGCGGCGGA CTCCTTAGGG CCGGATGTGG AAGTCACCCA CCTCAACCTC
AACGATCGCA CGGTAGCGGG GTTACGACAC CGCCATCTGC CCGTCTTCTC GGTCCAGTAT
CACCCCGAAG CCAGCCCAGG GCCCCATGAT TCTGACTATC TGTTTGAGCA GTTTGTGGCT
TTAATGCGCG ATCGCCAACC CACTCCAGTG GCTTAG
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| Protein sequence | MVRISGFCCA MSLAERQAAL LVLADGSVFH GYACGAAGTV IGEVVFNTGM TGYQEVLTDP
SYCGQIVSFT YPELGNTGVN PEDEESARPQ VSGLIARNVA RRHSNWRADR SLPDYLQQHN
IVGIYGIDTR ALTQHLRSTG AMNGGISTTI LDPEELWAEV KAAPSMEGLN LVDQVTTDRP
YEWQTPTSQT WEFIEGPTTE SLTVVAIDFG VKRNILRRLA SYGCRVIVVP ADTPIEEILR
HEPDGVFLSN GPGDPATVKN GISTAQALLQ TGLPLFGICL GHQILGLALG AQTFKLKFGH
RGLNHPCGLS QQVEITSQNH GFAIAADSLG PDVEVTHLNL NDRTVAGLRH RHLPVFSVQY
HPEASPGPHD SDYLFEQFVA LMRDRQPTPV A
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