More than 300 homologs were found in PanDaTox collection
for query gene Pcar_1613 on replicon NC_007498
Organism: Pelobacter carbinolicus DSM 2380



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007498  Pcar_1613  carbamoyl phosphate synthase small subunit  100 
 
 
376 aa  783    Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0266912  n/a   
 
 
-
 
NC_012918  GM21_2310  carbamoyl phosphate synthase small subunit  67.83 
 
 
374 aa  531  1e-150  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_1898  carbamoyl phosphate synthase small subunit  67.56 
 
 
374 aa  529  1e-149  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1858  carbamoyl phosphate synthase small subunit  65.68 
 
 
373 aa  523  1e-147  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2083  carbamoyl phosphate synthase small subunit  66.22 
 
 
373 aa  518  1e-146  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1771  carbamoyl phosphate synthase small subunit  66.49 
 
 
374 aa  520  1e-146  Geobacter metallireducens GS-15  Bacteria  normal  0.0224697  normal  0.089739 
 
 
-
 
NC_008609  Ppro_2527  carbamoyl phosphate synthase small subunit  66.93 
 
 
373 aa  518  1e-146  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1273  carbamoyl phosphate synthase small subunit  66.49 
 
 
374 aa  516  1.0000000000000001e-145  Geobacter sulfurreducens PCA  Bacteria  normal  0.0567002  n/a   
 
 
-
 
NC_014148  Plim_2032  carbamoyl-phosphate synthase, small subunit  62.77 
 
 
383 aa  488  1e-137  Planctomyces limnophilus DSM 3776  Bacteria  unclonable  0.000000277554  n/a   
 
 
-
 
NC_009523  RoseRS_4055  carbamoyl-phosphate synthase, small subunit  61.66 
 
 
386 aa  469  1.0000000000000001e-131  Roseiflexus sp. RS-1  Bacteria  normal  0.103191  normal 
 
 
-
 
NC_009767  Rcas_3359  carbamoyl-phosphate synthase, small subunit  61.6 
 
 
386 aa  468  1.0000000000000001e-131  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.663891  normal 
 
 
-
 
NC_008009  Acid345_2194  carbamoyl-phosphate synthase small subunit  59.57 
 
 
373 aa  462  1e-129  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_3019  carbamoyl-phosphate synthase small subunit  57.3 
 
 
377 aa  452  1.0000000000000001e-126  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_2240  carbamoyl phosphate synthase small subunit  57.8 
 
 
373 aa  451  1e-125  Anaeromyxobacter sp. K  Bacteria  normal  0.513182  n/a   
 
 
-
 
NC_011891  A2cp1_2328  carbamoyl phosphate synthase small subunit  57.8 
 
 
373 aa  450  1e-125  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1620  carbamoyl phosphate synthase small subunit  57.53 
 
 
373 aa  447  1.0000000000000001e-124  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.394714  n/a   
 
 
-
 
NC_009675  Anae109_2191  carbamoyl phosphate synthase small subunit  57.41 
 
 
372 aa  446  1.0000000000000001e-124  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.352304 
 
 
-
 
NC_009943  Dole_0120  carbamoyl-phosphate synthase, small subunit  58.31 
 
 
380 aa  436  1e-121  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0009  carbamoyl phosphate synthase small subunit  57.56 
 
 
391 aa  438  1e-121  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.35972  normal 
 
 
-
 
NC_007644  Moth_0881  carbamoyl-phosphate synthase small subunit  55.91 
 
 
361 aa  431  1e-120  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_2310  carbamoyl phosphate synthase small subunit  55.73 
 
 
384 aa  432  1e-120  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.162276 
 
 
-
 
NC_011831  Cagg_2643  carbamoyl-phosphate synthase, small subunit  57.49 
 
 
374 aa  431  1e-119  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_1942  carbamoyl phosphate synthase small subunit  57.45 
 
 
389 aa  431  1e-119  Cyanothece sp. PCC 7425  Bacteria  normal  0.230816  normal  0.202912 
 
 
-
 
NC_011726  PCC8801_0381  carbamoyl phosphate synthase small subunit  56.38 
 
 
380 aa  427  1e-118  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009253  Dred_1683  carbamoyl-phosphate synthase, small subunit  56.49 
 
 
359 aa  426  1e-118  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000104913  n/a   
 
 
-
 
NC_013161  Cyan8802_0390  carbamoyl phosphate synthase small subunit  56.38 
 
 
380 aa  427  1e-118  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_0372  carbamoyl-phosphate synthase, small subunit  55.11 
 
 
359 aa  426  1e-118  Ammonifex degensii KC4  Bacteria  normal  0.386907  n/a   
 
 
-
 
NC_011729  PCC7424_3196  carbamoyl phosphate synthase small subunit  56.42 
 
 
379 aa  425  1e-118  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0368063 
 
 
-
 
NC_010002  Daci_4932  carbamoyl-phosphate synthase, small subunit  56.66 
 
 
388 aa  423  1e-117  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.259128 
 
 
-
 
NC_007614  Nmul_A0478  carbamoyl-phosphate synthase, small subunit  55.61 
 
 
383 aa  422  1e-117  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_2459  carbamoyl phosphate synthase small subunit  54.91 
 
 
369 aa  422  1e-117  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.420642  n/a   
 
 
-
 
NC_007298  Daro_0938  carbamoyl-phosphate synthase small subunit  56.64 
 
 
385 aa  420  1e-116  Dechloromonas aromatica RCB  Bacteria  normal  0.742428  normal 
 
 
-
 
NC_007604  Synpcc7942_2122  carbamoyl phosphate synthase small subunit  56.53 
 
 
391 aa  418  1e-116  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.618886 
 
 
-
 
NC_013223  Dret_1071  carbamoyl-phosphate synthase, small subunit  56.84 
 
 
369 aa  419  1e-116  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0749952  normal  0.228018 
 
 
-
 
NC_010831  Cphamn1_2349  carbamoyl phosphate synthase small subunit  55.91 
 
 
366 aa  415  9.999999999999999e-116  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_007512  Plut_0156  carbamoyl phosphate synthase small subunit  55.44 
 
 
369 aa  418  9.999999999999999e-116  Chlorobium luteolum DSM 273  Bacteria  normal  0.983052  normal  0.416855 
 
 
-
 
NC_007912  Sde_2729  carbamoyl-phosphate synthase small subunit  56.18 
 
 
387 aa  415  9.999999999999999e-116  Saccharophagus degradans 2-40  Bacteria  normal  0.422158  normal 
 
 
-
 
NC_011060  Ppha_0218  carbamoyl phosphate synthase small subunit  56.03 
 
 
367 aa  415  9.999999999999999e-116  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_1774  carbamoyl phosphate synthase small subunit  53.77 
 
 
393 aa  415  9.999999999999999e-116  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.0283036 
 
 
-
 
NC_008740  Maqu_3359  carbamoyl-phosphate synthase, small subunit  55.83 
 
 
381 aa  418  9.999999999999999e-116  Marinobacter aquaeolei VT8  Bacteria  normal  0.365692  n/a   
 
 
-
 
NC_010803  Clim_2299  carbamoyl phosphate synthase small subunit  53.85 
 
 
369 aa  416  9.999999999999999e-116  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.0000401664  n/a   
 
 
-
 
NC_008752  Aave_2610  carbamoyl-phosphate synthase, small subunit  55.26 
 
 
392 aa  412  1e-114  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.752092 
 
 
-
 
NC_011662  Tmz1t_1731  carbamoyl phosphate synthase small subunit  55.73 
 
 
380 aa  410  1e-113  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_3646  carbamoyl phosphate synthase small subunit  55.73 
 
 
375 aa  409  1e-113  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_2615  carbamoyl phosphate synthase small subunit  53.97 
 
 
389 aa  408  1e-113  Variovorax paradoxus S110  Bacteria  normal  0.218889  n/a   
 
 
-
 
NC_009438  Sputcn32_2940  carbamoyl phosphate synthase small subunit  56.12 
 
 
386 aa  409  1e-113  Shewanella putrefaciens CN-32  Bacteria  normal  0.185194  n/a   
 
 
-
 
NC_008228  Patl_2215  carbamoyl-phosphate synthase, small subunit  55.7 
 
 
381 aa  411  1e-113  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.000311671  n/a   
 
 
-
 
NC_009092  Shew_2839  carbamoyl phosphate synthase small subunit  55.73 
 
 
390 aa  408  1e-113  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00340084  normal  0.0286195 
 
 
-
 
NC_009379  Pnuc_1019  carbamoyl-phosphate synthase, small subunit  53.65 
 
 
397 aa  408  1e-113  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2504  carbamoyl phosphate synthase small subunit  55.2 
 
 
381 aa  409  1e-113  Shewanella amazonensis SB2B  Bacteria  normal  0.323519  normal 
 
 
-
 
NC_011901  Tgr7_0975  carbamoyl-phosphate synthase, small subunit  54.89 
 
 
379 aa  407  1.0000000000000001e-112  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3526  carbamoyl phosphate synthase small subunit  56.65 
 
 
386 aa  405  1.0000000000000001e-112  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_1141  carbamoyl phosphate synthase small subunit  56.12 
 
 
386 aa  405  1.0000000000000001e-112  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010506  Swoo_3578  carbamoyl phosphate synthase small subunit  55.47 
 
 
381 aa  405  1.0000000000000001e-112  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0674639  normal  0.11278 
 
 
-
 
NC_012856  Rpic12D_1728  carbamoyl phosphate synthase small subunit  54.57 
 
 
378 aa  405  1.0000000000000001e-112  Ralstonia pickettii 12D  Bacteria  normal  0.590257  normal  0.961099 
 
 
-
 
NC_013204  Elen_1671  carbamoyl-phosphate synthase, small subunit  50.37 
 
 
504 aa  407  1.0000000000000001e-112  Eggerthella lenta DSM 2243  Bacteria  decreased coverage  0.00077424  hitchhiker  0.00974752 
 
 
-
 
NC_007413  Ava_4410  carbamoyl phosphate synthase small subunit  54.35 
 
 
388 aa  405  1.0000000000000001e-112  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.924948 
 
 
-
 
NC_009012  Cthe_0950  carbamoyl-phosphate synthase small subunit  53.23 
 
 
357 aa  405  1.0000000000000001e-112  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A4432  carbamoyl phosphate synthase small subunit  53.49 
 
 
380 aa  406  1.0000000000000001e-112  Burkholderia sp. 383  Bacteria  hitchhiker  0.00120805  normal 
 
 
-
 
NC_010682  Rpic_2036  carbamoyl phosphate synthase small subunit  54.57 
 
 
378 aa  405  1.0000000000000001e-112  Ralstonia pickettii 12J  Bacteria  normal  0.534876  normal 
 
 
-
 
NC_007643  Rru_A2885  carbamoyl-phosphate synthase small subunit  54.79 
 
 
389 aa  405  1.0000000000000001e-112  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_2353  carbamoyl-phosphate synthase, small subunit  54.64 
 
 
358 aa  405  1.0000000000000001e-112  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.00528586  normal 
 
 
-
 
NC_009831  Ssed_3404  carbamoyl phosphate synthase small subunit  55.61 
 
 
385 aa  405  1.0000000000000001e-112  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.0000786314 
 
 
-
 
NC_007948  Bpro_2679  carbamoyl phosphate synthase small subunit  54.07 
 
 
401 aa  405  1.0000000000000001e-112  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_011059  Paes_2113  carbamoyl phosphate synthase small subunit  52.38 
 
 
371 aa  405  1.0000000000000001e-112  Prosthecochloris aestuarii DSM 271  Bacteria  unclonable  0.000000000982338  normal  0.988223 
 
 
-
 
NC_013165  Shel_13220  carbamoyl-phosphate synthase small subunit  51.24 
 
 
467 aa  406  1.0000000000000001e-112  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.363669  normal  0.801105 
 
 
-
 
NC_007963  Csal_3086  carbamoyl-phosphate synthase small subunit  54.64 
 
 
381 aa  407  1.0000000000000001e-112  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.0580438  n/a   
 
 
-
 
NC_007973  Rmet_2195  carbamoyl phosphate synthase small subunit  54.45 
 
 
382 aa  405  1.0000000000000001e-112  Cupriavidus metallidurans CH34  Bacteria  normal  0.0764461  normal  0.137113 
 
 
-
 
NC_008322  Shewmr7_1003  carbamoyl phosphate synthase small subunit  56.38 
 
 
386 aa  405  1.0000000000000001e-112  Shewanella sp. MR-7  Bacteria  normal  0.0354323  normal 
 
 
-
 
NC_008836  BMA10229_A0587  carbamoyl phosphate synthase small subunit  53.1 
 
 
381 aa  402  1e-111  Burkholderia mallei NCTC 10229  Bacteria  normal  0.368687  n/a   
 
 
-
 
NC_011138  MADE_02244  carbamoyl-phosphate synthase small subunit  54.42 
 
 
440 aa  404  1e-111  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.0231375  n/a   
 
 
-
 
NC_010508  Bcenmc03_1261  carbamoyl phosphate synthase small subunit  52.69 
 
 
380 aa  402  1e-111  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0131767  normal  0.191599 
 
 
-
 
NC_006348  BMA0770  carbamoyl phosphate synthase small subunit  53.1 
 
 
381 aa  402  1e-111  Burkholderia mallei ATCC 23344  Bacteria  normal  0.76287  n/a   
 
 
-
 
NC_008825  Mpe_A1261  carbamoyl-phosphate synthase small subunit  54.86 
 
 
383 aa  404  1e-111  Methylibium petroleiphilum PM1  Bacteria  normal  decreased coverage  0.00672288 
 
 
-
 
NC_009901  Spea_3075  carbamoyl phosphate synthase small subunit  55.32 
 
 
381 aa  404  1e-111  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0335125  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1281  carbamoyl phosphate synthase small subunit  53.1 
 
 
381 aa  402  1e-111  Burkholderia mallei SAVP1  Bacteria  normal  0.697849  n/a   
 
 
-
 
NC_014248  Aazo_2282  carbamoyl-phosphate synthase small subunit  53.03 
 
 
385 aa  404  1e-111  'Nostoc azollae' 0708  Bacteria  normal  0.332421  n/a   
 
 
-
 
NC_009080  BMA10247_0564  carbamoyl phosphate synthase small subunit  53.1 
 
 
381 aa  402  1e-111  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_4242  carbamoyl-phosphate synthase, small subunit  52.94 
 
 
376 aa  402  1e-111  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007516  Syncc9605_1152  carbamoyl phosphate synthase small subunit  53.85 
 
 
386 aa  401  1e-111  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_009074  BURPS668_1475  carbamoyl phosphate synthase small subunit  53.1 
 
 
381 aa  402  1e-111  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_3305  carbamoyl phosphate synthase small subunit  56.38 
 
 
386 aa  404  1e-111  Shewanella baltica OS155  Bacteria  normal  0.314757  n/a   
 
 
-
 
NC_010655  Amuc_1250  carbamoyl-phosphate synthase, small subunit  52.52 
 
 
372 aa  404  1e-111  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_0809  carbamoyl phosphate synthase small subunit  52.69 
 
 
380 aa  402  1e-111  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0965  carbamoyl phosphate synthase small subunit  56.12 
 
 
386 aa  403  1e-111  Shewanella sp. MR-4  Bacteria  normal  0.0738044  normal 
 
 
-
 
NC_008345  Sfri_0975  carbamoyl phosphate synthase small subunit  55.61 
 
 
381 aa  401  1e-111  Shewanella frigidimarina NCIMB 400  Bacteria  hitchhiker  0.00141878  n/a   
 
 
-
 
NC_008463  PA14_62930  carbamoyl phosphate synthase small subunit  55.35 
 
 
378 aa  402  1e-111  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008542  Bcen2424_1290  carbamoyl phosphate synthase small subunit  52.69 
 
 
380 aa  402  1e-111  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0948613  n/a   
 
 
-
 
NC_008577  Shewana3_0967  carbamoyl phosphate synthase small subunit  56.38 
 
 
386 aa  404  1e-111  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00370508  normal 
 
 
-
 
NC_011663  Sbal223_1051  carbamoyl phosphate synthase small subunit  56.42 
 
 
387 aa  401  1e-111  Shewanella baltica OS223  Bacteria  normal  0.098868  hitchhiker  0.0000017806 
 
 
-
 
NC_008709  Ping_0896  carbamoyl-phosphate synthase, small subunit  53.87 
 
 
378 aa  401  1e-111  Psychromonas ingrahamii 37  Bacteria  normal  0.348294  normal  0.560722 
 
 
-
 
NC_007347  Reut_A2177  carbamoyl phosphate synthase small subunit  53.76 
 
 
378 aa  400  9.999999999999999e-111  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1127  carbamoyl-phosphate synthase small subunit  55.59 
 
 
379 aa  400  9.999999999999999e-111  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.390679  normal 
 
 
-
 
NC_007434  BURPS1710b_1608  carbamoyl phosphate synthase small subunit  52.83 
 
 
381 aa  400  9.999999999999999e-111  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_0107  carbamoyl phosphate synthase small subunit  53.19 
 
 
367 aa  398  9.999999999999999e-111  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I2783  carbamoyl phosphate synthase small subunit  53.1 
 
 
381 aa  400  9.999999999999999e-111  Burkholderia thailandensis E264  Bacteria  normal  0.259596  n/a   
 
 
-
 
NC_011083  SeHA_C0070  carbamoyl phosphate synthase small subunit  54.52 
 
 
391 aa  399  9.999999999999999e-111  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_2392  carbamoyl-phosphate synthase small subunit  53.95 
 
 
390 aa  400  9.999999999999999e-111  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_0591  carbamoyl phosphate synthase small subunit  54.79 
 
 
382 aa  400  9.999999999999999e-111  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3401  carbamoyl phosphate synthase small subunit  56.42 
 
 
391 aa  401  9.999999999999999e-111  Shewanella baltica OS185  Bacteria  hitchhiker  0.00720177  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>