| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1968 |
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| Symbol | carA |
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| ID | 5137723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2110528 |
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| End bp | 2111667 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640533425 |
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| Product | carbamoyl phosphate synthase small subunit |
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| Protein accession | YP_001217892 |
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| Protein GI | 147675544 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.837999 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGTAAAT CAGCACTGTT AGTCCTAGAA GATGGGACAG TGTTCCGCGG AGTGTCCATC
GGGGCAGATG GTATTTCCGT CGGTGAAGTC GTTTTCAATA CCTCGATGAC GGGGTACCAA
GAAATCCTCA CTGATCCTTC TTATTCCCAG CAAATCGTTA CTCTTACTTA TCCTCACATT
GGCAATACCG GAACCAACTC CGAAGACGAA GAATCCACCG CGATTCATGC TCAAGGCCTT
GTGATTCGCG ATCTCCCTCT TATCGCTTCT AACTTCCGCA GTGAACAATC CCTCTCTGAT
TATCTCAAGT CACAAAACAT TGTCGGTATT GCTGACATTG ATACCCGTAA ACTGACTCGT
ATCTTGCGTG AGAAAGGCGC ACAGAACGGC TGCATCATGG CGGGCGATAA TCTGGATGAA
GCATTAGCAC TGGCGAAAGC GAAAGAGTTT CCGGGCCTGA AAGGCATGGA TCTCGCGAAA
GTGGTTTCCA CCAAAGAAGC GTATGCGTGG AAACAAGGCT CATGGACGCT AGAAGGCGGC
CTACCTGAAG CGAAAGCGGA CAGCGAGCTG CCTTACCATG TTGTGGCTTA CGATTTTGGT
GCGAAGCGTA ACATCCTACG TATGTTGGTG GATCGTGGCT GCCGCTTAAC TGTGGTACCG
GCGCAGACCT CTGCAGAAGA CGTGCTCGCC CTTAATCCAG ACGGTGTGTT TCTATCCAAT
GGCCCAGGCG ACCCAGAGCC ATGTACTTAT GCGATTGAAG CCACACGCGT TTTCCTTGAG
AAAAACATTC CTGTTTTTGG GATCTGTCTA GGTCACCAAA TTCTGGCACT CGCCTCCGGC
GCGAAAACAG TAAAAATGAA GTTCGGTCAC CATGGTGCAA ACCATCCAGT GAAAGATTTG
GATCGCGGTG TGGTGATGAT CACCTCGCAA AACCACGGTT TTGCAGCCGA TGAAGCGACT
CTGCCTGACA ACCTGCGTGC AACCCACAAA TCGCTGTTTG ATGGTTCACT GCAAGGGATT
CATCGTACCG ACAAGCCAGC GTTTAGCTTC CAAGGCCACC CAGAAGCAAG CCCAGGTCCA
CACGATGCAG CACCGCTGTT TGACCACTTT ATTGAACTGA TTAAACAATT CCGCGCTTAA
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| Protein sequence | MSKSALLVLE DGTVFRGVSI GADGISVGEV VFNTSMTGYQ EILTDPSYSQ QIVTLTYPHI
GNTGTNSEDE ESTAIHAQGL VIRDLPLIAS NFRSEQSLSD YLKSQNIVGI ADIDTRKLTR
ILREKGAQNG CIMAGDNLDE ALALAKAKEF PGLKGMDLAK VVSTKEAYAW KQGSWTLEGG
LPEAKADSEL PYHVVAYDFG AKRNILRMLV DRGCRLTVVP AQTSAEDVLA LNPDGVFLSN
GPGDPEPCTY AIEATRVFLE KNIPVFGICL GHQILALASG AKTVKMKFGH HGANHPVKDL
DRGVVMITSQ NHGFAADEAT LPDNLRATHK SLFDGSLQGI HRTDKPAFSF QGHPEASPGP
HDAAPLFDHF IELIKQFRA
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