More than 300 homologs were found in PanDaTox collection
for query gene Dbac_0133 on replicon NC_013173
Organism: Desulfomicrobium baculatum DSM 4028



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013173  Dbac_0133  carbamoyl-phosphate synthase, small subunit  100 
 
 
378 aa  785    Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_3646  carbamoyl phosphate synthase small subunit  66.49 
 
 
375 aa  518  1e-146  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0268  carbamoyl phosphate synthase small subunit  66.76 
 
 
375 aa  521  1e-146  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.583908 
 
 
-
 
NC_011769  DvMF_2370  carbamoyl phosphate synthase small subunit  66.58 
 
 
376 aa  511  1e-144  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.82733 
 
 
-
 
NC_013223  Dret_1071  carbamoyl-phosphate synthase, small subunit  59.95 
 
 
369 aa  473  1e-132  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0749952  normal  0.228018 
 
 
-
 
NC_011883  Ddes_1097  carbamoyl phosphate synthase small subunit  61.23 
 
 
376 aa  460  9.999999999999999e-129  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.643284  n/a   
 
 
-
 
NC_009943  Dole_0120  carbamoyl-phosphate synthase, small subunit  56.73 
 
 
380 aa  429  1e-119  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1858  carbamoyl phosphate synthase small subunit  53.11 
 
 
373 aa  402  1e-111  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2310  carbamoyl phosphate synthase small subunit  54.35 
 
 
374 aa  400  9.999999999999999e-111  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_1898  carbamoyl phosphate synthase small subunit  54.19 
 
 
374 aa  400  9.999999999999999e-111  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1613  carbamoyl phosphate synthase small subunit  54.81 
 
 
376 aa  399  9.999999999999999e-111  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0266912  n/a   
 
 
-
 
NC_007517  Gmet_1771  carbamoyl phosphate synthase small subunit  52.88 
 
 
374 aa  399  9.999999999999999e-111  Geobacter metallireducens GS-15  Bacteria  normal  0.0224697  normal  0.089739 
 
 
-
 
NC_002939  GSU1273  carbamoyl phosphate synthase small subunit  53.74 
 
 
374 aa  395  1e-109  Geobacter sulfurreducens PCA  Bacteria  normal  0.0567002  n/a   
 
 
-
 
NC_010814  Glov_2083  carbamoyl phosphate synthase small subunit  54.35 
 
 
373 aa  392  1e-108  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2527  carbamoyl phosphate synthase small subunit  55.05 
 
 
373 aa  392  1e-108  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0009  carbamoyl phosphate synthase small subunit  52.55 
 
 
391 aa  390  1e-107  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.35972  normal 
 
 
-
 
NC_014148  Plim_2032  carbamoyl-phosphate synthase, small subunit  51.34 
 
 
383 aa  381  1e-105  Planctomyces limnophilus DSM 3776  Bacteria  unclonable  0.000000277554  n/a   
 
 
-
 
NC_009767  Rcas_3359  carbamoyl-phosphate synthase, small subunit  50.52 
 
 
386 aa  381  1e-104  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.663891  normal 
 
 
-
 
NC_013385  Adeg_0372  carbamoyl-phosphate synthase, small subunit  50.27 
 
 
359 aa  379  1e-104  Ammonifex degensii KC4  Bacteria  normal  0.386907  n/a   
 
 
-
 
NC_009523  RoseRS_4055  carbamoyl-phosphate synthase, small subunit  51.47 
 
 
386 aa  380  1e-104  Roseiflexus sp. RS-1  Bacteria  normal  0.103191  normal 
 
 
-
 
NC_007604  Synpcc7942_2122  carbamoyl phosphate synthase small subunit  51.33 
 
 
391 aa  376  1e-103  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.618886 
 
 
-
 
NC_010483  TRQ2_0379  carbamoyl phosphate synthase small subunit  47.65 
 
 
392 aa  375  1e-103  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_2310  carbamoyl phosphate synthase small subunit  51.05 
 
 
384 aa  377  1e-103  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.162276 
 
 
-
 
NC_009486  Tpet_0362  carbamoyl phosphate synthase small subunit  47.65 
 
 
392 aa  375  1e-103  Thermotoga petrophila RKU-1  Bacteria  normal  0.0108123  n/a   
 
 
-
 
NC_010803  Clim_2299  carbamoyl phosphate synthase small subunit  50.92 
 
 
369 aa  372  1e-102  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.0000401664  n/a   
 
 
-
 
NC_009253  Dred_1683  carbamoyl-phosphate synthase, small subunit  49.32 
 
 
359 aa  369  1e-101  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000104913  n/a   
 
 
-
 
NC_011884  Cyan7425_1942  carbamoyl phosphate synthase small subunit  50.54 
 
 
389 aa  370  1e-101  Cyanothece sp. PCC 7425  Bacteria  normal  0.230816  normal  0.202912 
 
 
-
 
NC_011726  PCC8801_0381  carbamoyl phosphate synthase small subunit  50.54 
 
 
380 aa  368  1e-100  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_0390  carbamoyl phosphate synthase small subunit  50.54 
 
 
380 aa  368  1e-100  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_4242  carbamoyl-phosphate synthase, small subunit  50 
 
 
376 aa  365  1e-100  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_2191  carbamoyl phosphate synthase small subunit  49.6 
 
 
372 aa  365  1e-100  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.352304 
 
 
-
 
NC_008009  Acid345_2194  carbamoyl-phosphate synthase small subunit  49.33 
 
 
373 aa  365  1e-99  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_007512  Plut_0156  carbamoyl phosphate synthase small subunit  49.34 
 
 
369 aa  363  2e-99  Chlorobium luteolum DSM 273  Bacteria  normal  0.983052  normal  0.416855 
 
 
-
 
NC_008639  Cpha266_2459  carbamoyl phosphate synthase small subunit  49.08 
 
 
369 aa  364  2e-99  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.420642  n/a   
 
 
-
 
NC_011059  Paes_2113  carbamoyl phosphate synthase small subunit  49.34 
 
 
371 aa  362  5.0000000000000005e-99  Prosthecochloris aestuarii DSM 271  Bacteria  unclonable  0.000000000982338  normal  0.988223 
 
 
-
 
NC_007413  Ava_4410  carbamoyl phosphate synthase small subunit  49.61 
 
 
388 aa  362  6e-99  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.924948 
 
 
-
 
NC_011831  Cagg_2643  carbamoyl-phosphate synthase, small subunit  49.6 
 
 
374 aa  362  7.0000000000000005e-99  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_010655  Amuc_1250  carbamoyl-phosphate synthase, small subunit  49.74 
 
 
372 aa  361  1e-98  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_3196  carbamoyl phosphate synthase small subunit  49.47 
 
 
379 aa  357  9.999999999999999e-98  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0368063 
 
 
-
 
NC_010424  Daud_1303  carbamoyl-phosphate synthase, small subunit  47.73 
 
 
359 aa  357  1.9999999999999998e-97  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0780078  n/a   
 
 
-
 
NC_014248  Aazo_2282  carbamoyl-phosphate synthase small subunit  48.17 
 
 
385 aa  354  2e-96  'Nostoc azollae' 0708  Bacteria  normal  0.332421  n/a   
 
 
-
 
NC_010730  SYO3AOP1_1361  carbamoyl phosphate synthase small subunit  48.03 
 
 
376 aa  354  2e-96  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_0881  carbamoyl-phosphate synthase small subunit  46.97 
 
 
361 aa  353  2e-96  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_011060  Ppha_0218  carbamoyl phosphate synthase small subunit  49.21 
 
 
367 aa  354  2e-96  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2240  carbamoyl phosphate synthase small subunit  48.53 
 
 
373 aa  352  8.999999999999999e-96  Anaeromyxobacter sp. K  Bacteria  normal  0.513182  n/a   
 
 
-
 
NC_011891  A2cp1_2328  carbamoyl phosphate synthase small subunit  47.88 
 
 
373 aa  351  8.999999999999999e-96  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1620  carbamoyl phosphate synthase small subunit  47.88 
 
 
373 aa  351  1e-95  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.394714  n/a   
 
 
-
 
NC_013889  TK90_0698  carbamoyl-phosphate synthase, small subunit  48.95 
 
 
377 aa  351  1e-95  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.110228 
 
 
-
 
NC_007516  Syncc9605_1152  carbamoyl phosphate synthase small subunit  47.44 
 
 
386 aa  348  8e-95  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_010831  Cphamn1_2349  carbamoyl phosphate synthase small subunit  48.81 
 
 
366 aa  348  1e-94  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_1540  carbamoyl-phosphate synthase, small subunit  47.07 
 
 
356 aa  346  4e-94  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_008820  P9303_15771  carbamoyl phosphate synthase small subunit  47.44 
 
 
379 aa  346  4e-94  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_008576  Mmc1_3019  carbamoyl-phosphate synthase small subunit  48.28 
 
 
377 aa  346  4e-94  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_2353  carbamoyl-phosphate synthase, small subunit  47.84 
 
 
358 aa  345  8.999999999999999e-94  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.00528586  normal 
 
 
-
 
NC_007514  Cag_0107  carbamoyl phosphate synthase small subunit  48.94 
 
 
367 aa  344  2e-93  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_007513  Syncc9902_1307  carbamoyl phosphate synthase small subunit  47.17 
 
 
398 aa  340  2e-92  Synechococcus sp. CC9902  Bacteria  normal  0.786161  n/a   
 
 
-
 
NC_011898  Ccel_2913  carbamoyl-phosphate synthase, small subunit  47.07 
 
 
351 aa  340  2.9999999999999998e-92  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_3203  carbamoyl-phosphate synthase, small subunit  47.87 
 
 
368 aa  340  2.9999999999999998e-92  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_1774  carbamoyl phosphate synthase small subunit  46.21 
 
 
393 aa  339  5e-92  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.0283036 
 
 
-
 
NC_009976  P9211_06931  carbamoyl phosphate synthase small subunit  46.9 
 
 
380 aa  338  9.999999999999999e-92  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  0.0298336  normal  0.187512 
 
 
-
 
NC_008819  NATL1_09281  carbamoyl phosphate synthase small subunit  47.62 
 
 
384 aa  337  1.9999999999999998e-91  Prochlorococcus marinus str. NATL1A  Bacteria  normal  0.87193  normal  0.0301636 
 
 
-
 
NC_007335  PMN2A_0259  carbamoyl phosphate synthase small subunit  47.62 
 
 
384 aa  337  2.9999999999999997e-91  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_2679  carbamoyl phosphate synthase small subunit  45.79 
 
 
401 aa  334  1e-90  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_008816  A9601_09091  carbamoyl phosphate synthase small subunit  45.6 
 
 
379 aa  333  2e-90  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.347132  n/a   
 
 
-
 
NC_010002  Daci_4932  carbamoyl-phosphate synthase, small subunit  47.12 
 
 
388 aa  333  3e-90  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.259128 
 
 
-
 
NC_011901  Tgr7_0975  carbamoyl-phosphate synthase, small subunit  45.65 
 
 
379 aa  333  4e-90  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0938  carbamoyl-phosphate synthase small subunit  46.13 
 
 
385 aa  332  8e-90  Dechloromonas aromatica RCB  Bacteria  normal  0.742428  normal 
 
 
-
 
NC_011126  HY04AAS1_0951  carbamoyl-phosphate synthase, small subunit  45.97 
 
 
352 aa  331  1e-89  Hydrogenobaculum sp. Y04AAS1  Bacteria  hitchhiker  0.00000000113034  n/a   
 
 
-
 
NC_008700  Sama_2504  carbamoyl phosphate synthase small subunit  47.18 
 
 
381 aa  331  2e-89  Shewanella amazonensis SB2B  Bacteria  normal  0.323519  normal 
 
 
-
 
NC_009091  P9301_09071  carbamoyl phosphate synthase small subunit  44.53 
 
 
379 aa  330  3e-89  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_0790  carbamoyl-phosphate synthase, small subunit  46.63 
 
 
380 aa  329  5.0000000000000004e-89  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_011761  AFE_0640  carbamoyl-phosphate synthase, small subunit  46.63 
 
 
380 aa  329  5.0000000000000004e-89  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_0950  carbamoyl-phosphate synthase small subunit  46.58 
 
 
357 aa  329  6e-89  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_02880  carbamoyl-phosphate synthase, small subunit  47.21 
 
 
364 aa  328  1.0000000000000001e-88  Halothermothrix orenii H 168  Bacteria  normal  0.422195  n/a   
 
 
-
 
NC_009436  Ent638_0591  carbamoyl phosphate synthase small subunit  47.06 
 
 
382 aa  328  1.0000000000000001e-88  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_011898  Ccel_0615  carbamoyl-phosphate synthase, small subunit  46.93 
 
 
360 aa  327  2.0000000000000001e-88  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_2898  carbamoyl phosphate synthase small subunit  45.95 
 
 
349 aa  327  2.0000000000000001e-88  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_3648  carbamoyl phosphate synthase small subunit  46.95 
 
 
382 aa  326  4.0000000000000003e-88  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.48497  n/a   
 
 
-
 
NC_008740  Maqu_3359  carbamoyl-phosphate synthase, small subunit  46.13 
 
 
381 aa  326  4.0000000000000003e-88  Marinobacter aquaeolei VT8  Bacteria  normal  0.365692  n/a   
 
 
-
 
NC_011992  Dtpsy_1456  carbamoyl-phosphate synthase, small subunit  44.44 
 
 
390 aa  325  6e-88  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_2392  carbamoyl-phosphate synthase small subunit  44.44 
 
 
390 aa  325  6e-88  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_02244  carbamoyl-phosphate synthase small subunit  46.68 
 
 
440 aa  325  7e-88  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.0231375  n/a   
 
 
-
 
NC_010571  Oter_1915  carbamoyl-phosphate synthase, small subunit  44.71 
 
 
390 aa  325  8.000000000000001e-88  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_009379  Pnuc_1019  carbamoyl-phosphate synthase, small subunit  45.41 
 
 
397 aa  325  9e-88  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_2577  carbamoyl phosphate synthase small subunit  45.68 
 
 
349 aa  324  1e-87  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_010531  Pnec_0848  carbamoyl-phosphate synthase, small subunit  45.31 
 
 
398 aa  324  2e-87  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal  0.287672 
 
 
-
 
NC_007577  PMT9312_0848  carbamoyl phosphate synthase small subunit  44.53 
 
 
379 aa  323  3e-87  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_2002  carbamoyl-phosphate synthase, small subunit  44.74 
 
 
379 aa  323  3e-87  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_2823  carbamoyl-phosphate synthase, small subunit  45.53 
 
 
394 aa  322  8e-87  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009831  Ssed_3404  carbamoyl phosphate synthase small subunit  45.04 
 
 
385 aa  321  9.999999999999999e-87  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.0000786314 
 
 
-
 
NC_010622  Bphy_0873  carbamoyl phosphate synthase small subunit  43.08 
 
 
384 aa  321  9.999999999999999e-87  Burkholderia phymatum STM815  Bacteria  normal  0.644445  normal  0.264285 
 
 
-
 
NC_007908  Rfer_2004  carbamoyl phosphate synthase small subunit  46.46 
 
 
393 aa  320  1.9999999999999998e-86  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_0896  carbamoyl-phosphate synthase, small subunit  45.33 
 
 
378 aa  320  1.9999999999999998e-86  Psychromonas ingrahamii 37  Bacteria  normal  0.348294  normal  0.560722 
 
 
-
 
NC_008817  P9515_10341  carbamoyl phosphate synthase small subunit  43.73 
 
 
379 aa  320  3e-86  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_1011  carbamoyl phosphate synthase small subunit  43.55 
 
 
364 aa  320  3e-86  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_62930  carbamoyl phosphate synthase small subunit  47.17 
 
 
378 aa  320  3e-86  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_1916  carbamoyl phosphate synthase small subunit  46.79 
 
 
364 aa  319  3.9999999999999996e-86  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010681  Bphyt_2868  carbamoyl phosphate synthase small subunit  44.12 
 
 
384 aa  319  5e-86  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.00228162  normal 
 
 
-
 
NC_010465  YPK_3583  carbamoyl phosphate synthase small subunit  46.54 
 
 
391 aa  319  6e-86  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_984  carbamoyl-phosphate synthase, small subunit  44.27 
 
 
364 aa  318  7e-86  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
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