Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_2913 |
Symbol | |
ID | 7311528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 3469203 |
End bp | 3470258 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643609813 |
Product | carbamoyl-phosphate synthase, small subunit |
Protein accession | YP_002507187 |
Protein GI | 220930278 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCAG TTCTATTACT TGAAGACGGT ACATATTTCT CAGGTGAAGG CTTTGGAAAA AGCGGAGAAA CCGCCGGAGA AATTGTTTTT AATACTAGTA TGACTGGGTA TCAGGAAATA ATTACTGATC CCTCCTATAA CGGACAGATT GTAACAATGA CTTACCCCCT TATTGGGAAC TATGGATTCA ATTCTTTCGA TAATGAATCC TACAAGCCAC ATGTTCAGGG CTTTATAGTT AAGGAGCTCT GCTCTACACC AAGCAATTGG AGAAATGATA TGGATCCGGA TCAATATTTT GCCAAACACA ATATTGTAGG AATTAAAAGT ATTGATACCA GAGCATTGAC CCAGCATATA CGTAGACATG GGAGTATGTA CGGAATAATA TCCACTGAAT GTGGGAATCT GGATATCCTC AGCAAAAACC TTAAAAACTA TAAAACTGTT CCAAGAAATC TGGTAATGGA GGTTACATCA AAAACTCCGA CTCATATTCC GGGTTCTGGC AAAAAGGTAG CTCTTTTGGA TCTCGGTGTC AAAAGCAACA TAATACGTTC TCTGGAAAGT AGGAACTGTG ATATACACAT TCTCCCTGCT TTCAGCACCT TTGATGAGAT CATGGATTTG AATCCCGATG GTATATTTTT ATCAAACGGA CCCGGAAATC CAATGGATTT GACAGTTGCC AAAAAAACAG TTCAAAAACT TCTGGGAATC AAACCAATCA TGGGAATTTG TCTTGGACAT CAGTTATTAG GACTTTCATT GGGCTGCAAT GTAAAAAAGC TCAAATTCGG TCATCATGGC GGCAATCACC CAGTTAAGGA TTATATTACG GGAAGATGCT ATATTACTTC TCAAAATCAC AATTATGTAA TAGACAGCAC CTCTAGCGAT GATATAGTAA TAACACACAA AAATGTAAAT GATGATACAA TCGAAGGCTT CAGGCATAAA ACACTTCCTG TAATAAGTGT ACAATACCAT CCTGAAGCTG CACCGGGTCC CCAGGATTCC GCATATATTT TTGATGACTT TATAAAAATG ATGTAG
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Protein sequence | MKAVLLLEDG TYFSGEGFGK SGETAGEIVF NTSMTGYQEI ITDPSYNGQI VTMTYPLIGN YGFNSFDNES YKPHVQGFIV KELCSTPSNW RNDMDPDQYF AKHNIVGIKS IDTRALTQHI RRHGSMYGII STECGNLDIL SKNLKNYKTV PRNLVMEVTS KTPTHIPGSG KKVALLDLGV KSNIIRSLES RNCDIHILPA FSTFDEIMDL NPDGIFLSNG PGNPMDLTVA KKTVQKLLGI KPIMGICLGH QLLGLSLGCN VKKLKFGHHG GNHPVKDYIT GRCYITSQNH NYVIDSTSSD DIVITHKNVN DDTIEGFRHK TLPVISVQYH PEAAPGPQDS AYIFDDFIKM M
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