| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2823 |
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| Symbol | |
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| ID | 6161630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3110343 |
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| End bp | 3111527 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641665601 |
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| Product | carbamoyl-phosphate synthase, small subunit |
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| Protein accession | YP_001791853 |
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| Protein GI | 171059504 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGCCCG TCCTGCCTCC CGCCATCCTC GCACTCGCAG ACGGTACGGT CTTTCAAGGT
GTCTCGATCG GCGCTGCCGG TCACACCGTG GGTGAGGTTG TGTTCAACAC AGCGCTCACC
GGCTATCAAG AGATCCTGAC CGACCCGAGC TACTGCCGGC AGATCGTCAC CCTGACGTAT
CCGCACATCG GCAACTACGG CGTCAATGAA CAGGATGTCG AGGCCCGCAA AGTACACGCT
GCGGGCCTGA TCATCAAAGA CCTCCCGATC CGTTCGTCCA ACTTTCGCCA GTCGCTGACG
CTGTCGCAAT ACTTGGTGCG TGAAGGCACC GTTGCGATCG CCGACCTCGA CACCCGCCGC
CTCACCCGCA TCCTGCGCAC CCACGGTGCC CAGAACGGCT GCATCGTGGC GTTTGCAGCT
GACACCGTCG TGACACAAGC CATGCGCGAC GAGGCCGTCG CGCTGGCCCG CAAGGCCCCC
AGCATGGCCG GCCTCGACTT GGCTCAGGTC GTCACCACCG ACGTCTCGTA TCCCTGGACC
GAAACCGAGT GGCAGCTCCT CGGCGCCGAC GGCACGCCAG GGTTCGGCGA CCAGACCGCA
CCGCGTTTCC ATGTCGTGGC CTACGACTTC GGCGTCAAGC GCAACATCCT GCGCATGCTG
GCCGAGCGCG GCTGCAAGGT CACCGTGGTG CCTGCCAGGA CGCCGGCCGC CGAAGCGCTC
GCGCTCAAGC CCGACGGCAT CTTCCTGAGC AACGGCCCGG GTGACCCGCA GCCCTGCGAC
TACGCCATCG AGGCGGCTGC CGAACTGATC GAGACCGGCA TCCCGACCTT CGGCATCTGC
CTGGGCCACC AGATCATGGC GCTGGCCTCG GGCGCCAAGA CCTTCAAGAT GAAGTTCGGC
CACCACGGCG CCAACCATCC GGTCAAGGAT CTCGACACCG GCCGCGTCTC CATCACCAGC
CAGAACCACG GTTTTGCGGT CGATGCCGAG TCGCTGCCGG CCAACCTGCG CACCACGCAC
GTGAGCCTGT TCGACGGCAC GCTGCAAGGC CTGGCGCGCA CCGACAAGCC GGCGTTCTGC
TTCCAGGGCC ACCCGGAAGC CTCGCCCGGT CCCCATGACA TTGCCTACCT GTTCGACCGC
TTCACCAAGC TGATGAGCGA CCAAGCGGAG AAGAAGAATG CCTAA
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| Protein sequence | MLPVLPPAIL ALADGTVFQG VSIGAAGHTV GEVVFNTALT GYQEILTDPS YCRQIVTLTY
PHIGNYGVNE QDVEARKVHA AGLIIKDLPI RSSNFRQSLT LSQYLVREGT VAIADLDTRR
LTRILRTHGA QNGCIVAFAA DTVVTQAMRD EAVALARKAP SMAGLDLAQV VTTDVSYPWT
ETEWQLLGAD GTPGFGDQTA PRFHVVAYDF GVKRNILRML AERGCKVTVV PARTPAAEAL
ALKPDGIFLS NGPGDPQPCD YAIEAAAELI ETGIPTFGIC LGHQIMALAS GAKTFKMKFG
HHGANHPVKD LDTGRVSITS QNHGFAVDAE SLPANLRTTH VSLFDGTLQG LARTDKPAFC
FQGHPEASPG PHDIAYLFDR FTKLMSDQAE KKNA
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