Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_1456 |
Symbol | |
ID | 7385098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 1523726 |
End bp | 1524898 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643654773 |
Product | carbamoyl-phosphate synthase, small subunit |
Protein accession | YP_002552918 |
Protein GI | 222110654 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTTTTGT CTCTCAAGGG AACCTTCCCG CCCGCCATCC TGGCGCTCGC AGACGGCACG GTCTTTATCG GTAACTCGAT CGGTGCCGCC GGCACCACGG TCGGCGAAGT GGTCTTCAAT ACCGCCATCA CCGGCTACCA GGAAATTCTC ACGGACCCCA GCTACTGCCA GCAGATCGTC ACCCTGACGT ATCCGCACAT CGGCAACTAC GGCGTCAACG CAGAGGATAT CGAGGCTGAA AAAGTCCACG CCGCAGGCCT CATCATCAAG GACCTGCCGC TGCTGGCCAG CAACTTCCGC ATGACCGAGA CGCTGCCCGA GTACCTCGTG CGTGCCAAGA CGGTGGCCAT CGCCAACATC GACACCCGCA AACTGACCCG CCTGCTGCGC ACCCAGGGCG CGCAAAATGG CGCCATCGTC GGCTTGGCGG CTGGCGAGGC CGTGACCCAG GCGCGCATCG ACGAAGCCGT GGCCGCGGCG AAGGCGGCGC CCAACATGAA CGGGCTGGAT CTGGCCAAGG TCGTGACCAC GCGTGCCGCG TACGCCTGGG ACCAGACTGA GTGGAAGCTG GGCGAAGGCT ACGGCACGCA GACGGCCCCG CGCTTTCACG TCGTGGCCTA TGACTATGGC GTGAAGCTGA ACATCCTGCG CATGCTGGCC GAACGCGGCT GCAGGCTCAC CGTGGTGCCC GCGCAGACCC CGGCGGCAGA GGTGCTGGCC ATGAATCCCG ATGGCGTGTT CCTGTCCAAC GGCCCGGGCG ACCCGGCGGC CTGCGACTAC GCGATCACGG CAGTCAAGCA GATCATCGAC AGCGGCGTAC CTACCTTCGG CATCTGCCTG GGCCACCAGA TCATGGCGCT GGCCAGTGGC GCCAGGACTT TCAAGATGGA CAACAGCCAC CATGGCGCAA ACCACCCTGT GAAGGACTTG GACAGCGGCC GGGTAAGCAT CACCAGCCAG AACCACGGTT TCGCGGTGGA CATGGCATCG CTGCCGGCCA CCTTGCGCGC CACGCACATC AGCCTGTTCG ACGGCACGCT GCAGGGCCTG GAACACAAGG ACAAGCCGGC CTTCTGTTTC CAGGGGCACC CCGAGGCGTC ACCCGGTCCG CACGACATTG CCTACCTGTT CGACCGCTTC ACCACTCTGA TGCAGGCCGC CAAGGCCCAG TAA
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Protein sequence | MLLSLKGTFP PAILALADGT VFIGNSIGAA GTTVGEVVFN TAITGYQEIL TDPSYCQQIV TLTYPHIGNY GVNAEDIEAE KVHAAGLIIK DLPLLASNFR MTETLPEYLV RAKTVAIANI DTRKLTRLLR TQGAQNGAIV GLAAGEAVTQ ARIDEAVAAA KAAPNMNGLD LAKVVTTRAA YAWDQTEWKL GEGYGTQTAP RFHVVAYDYG VKLNILRMLA ERGCRLTVVP AQTPAAEVLA MNPDGVFLSN GPGDPAACDY AITAVKQIID SGVPTFGICL GHQIMALASG ARTFKMDNSH HGANHPVKDL DSGRVSITSQ NHGFAVDMAS LPATLRATHI SLFDGTLQGL EHKDKPAFCF QGHPEASPGP HDIAYLFDRF TTLMQAAKAQ
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