More than 300 homologs were found in PanDaTox collection
for query gene Ddes_1097 on replicon NC_011883
Organism: Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011883  Ddes_1097  carbamoyl phosphate synthase small subunit  100 
 
 
376 aa  782    Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.643284  n/a   
 
 
-
 
NC_008751  Dvul_0268  carbamoyl phosphate synthase small subunit  68.27 
 
 
375 aa  530  1e-149  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.583908 
 
 
-
 
NC_007519  Dde_3646  carbamoyl phosphate synthase small subunit  67.47 
 
 
375 aa  523  1e-147  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2370  carbamoyl phosphate synthase small subunit  65.33 
 
 
376 aa  515  1.0000000000000001e-145  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.82733 
 
 
-
 
NC_013173  Dbac_0133  carbamoyl-phosphate synthase, small subunit  61.23 
 
 
378 aa  468  1.0000000000000001e-131  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_1071  carbamoyl-phosphate synthase, small subunit  57.14 
 
 
369 aa  431  1e-119  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0749952  normal  0.228018 
 
 
-
 
NC_009943  Dole_0120  carbamoyl-phosphate synthase, small subunit  54.67 
 
 
380 aa  405  1.0000000000000001e-112  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0009  carbamoyl phosphate synthase small subunit  52.16 
 
 
391 aa  370  1e-101  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.35972  normal 
 
 
-
 
NC_009253  Dred_1683  carbamoyl-phosphate synthase, small subunit  50.95 
 
 
359 aa  365  1e-100  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000104913  n/a   
 
 
-
 
NC_010814  Glov_2083  carbamoyl phosphate synthase small subunit  51.83 
 
 
373 aa  365  1e-100  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1273  carbamoyl phosphate synthase small subunit  50.94 
 
 
374 aa  360  2e-98  Geobacter sulfurreducens PCA  Bacteria  normal  0.0567002  n/a   
 
 
-
 
NC_009483  Gura_1858  carbamoyl phosphate synthase small subunit  50.13 
 
 
373 aa  360  3e-98  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1771  carbamoyl phosphate synthase small subunit  50.4 
 
 
374 aa  359  4e-98  Geobacter metallireducens GS-15  Bacteria  normal  0.0224697  normal  0.089739 
 
 
-
 
NC_007498  Pcar_1613  carbamoyl phosphate synthase small subunit  49.06 
 
 
376 aa  358  8e-98  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0266912  n/a   
 
 
-
 
NC_013385  Adeg_0372  carbamoyl-phosphate synthase, small subunit  48.94 
 
 
359 aa  357  9.999999999999999e-98  Ammonifex degensii KC4  Bacteria  normal  0.386907  n/a   
 
 
-
 
NC_008609  Ppro_2527  carbamoyl phosphate synthase small subunit  50.94 
 
 
373 aa  355  5e-97  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_2032  carbamoyl-phosphate synthase, small subunit  49.73 
 
 
383 aa  355  7.999999999999999e-97  Planctomyces limnophilus DSM 3776  Bacteria  unclonable  0.000000277554  n/a   
 
 
-
 
NC_010655  Amuc_1250  carbamoyl-phosphate synthase, small subunit  50.92 
 
 
372 aa  350  2e-95  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_1898  carbamoyl phosphate synthase small subunit  48.03 
 
 
374 aa  349  4e-95  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2310  carbamoyl phosphate synthase small subunit  48.52 
 
 
374 aa  349  6e-95  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010424  Daud_1303  carbamoyl-phosphate synthase, small subunit  49.47 
 
 
359 aa  348  8e-95  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0780078  n/a   
 
 
-
 
NC_007413  Ava_4410  carbamoyl phosphate synthase small subunit  49.32 
 
 
388 aa  346  4e-94  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.924948 
 
 
-
 
NC_008009  Acid345_2194  carbamoyl-phosphate synthase small subunit  48.28 
 
 
373 aa  345  5e-94  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_0881  carbamoyl-phosphate synthase small subunit  48.14 
 
 
361 aa  344  1e-93  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2643  carbamoyl-phosphate synthase, small subunit  50 
 
 
374 aa  343  2e-93  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_2282  carbamoyl-phosphate synthase small subunit  49.59 
 
 
385 aa  342  4e-93  'Nostoc azollae' 0708  Bacteria  normal  0.332421  n/a   
 
 
-
 
NC_009972  Haur_4242  carbamoyl-phosphate synthase, small subunit  47.77 
 
 
376 aa  342  7e-93  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_1942  carbamoyl phosphate synthase small subunit  49.86 
 
 
389 aa  341  1e-92  Cyanothece sp. PCC 7425  Bacteria  normal  0.230816  normal  0.202912 
 
 
-
 
NC_009486  Tpet_0362  carbamoyl phosphate synthase small subunit  44.44 
 
 
392 aa  341  1e-92  Thermotoga petrophila RKU-1  Bacteria  normal  0.0108123  n/a   
 
 
-
 
NC_007512  Plut_0156  carbamoyl phosphate synthase small subunit  48.53 
 
 
369 aa  340  2e-92  Chlorobium luteolum DSM 273  Bacteria  normal  0.983052  normal  0.416855 
 
 
-
 
NC_008312  Tery_2310  carbamoyl phosphate synthase small subunit  48 
 
 
384 aa  340  2e-92  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.162276 
 
 
-
 
NC_010483  TRQ2_0379  carbamoyl phosphate synthase small subunit  44.44 
 
 
392 aa  339  4e-92  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1540  carbamoyl-phosphate synthase, small subunit  45.68 
 
 
356 aa  337  2.9999999999999997e-91  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_2459  carbamoyl phosphate synthase small subunit  46.03 
 
 
369 aa  333  2e-90  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.420642  n/a   
 
 
-
 
NC_010803  Clim_2299  carbamoyl phosphate synthase small subunit  48 
 
 
369 aa  333  3e-90  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.0000401664  n/a   
 
 
-
 
NC_007604  Synpcc7942_2122  carbamoyl phosphate synthase small subunit  47.84 
 
 
391 aa  333  4e-90  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.618886 
 
 
-
 
NC_007760  Adeh_1620  carbamoyl phosphate synthase small subunit  47.73 
 
 
373 aa  332  5e-90  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.394714  n/a   
 
 
-
 
NC_011145  AnaeK_2240  carbamoyl phosphate synthase small subunit  47.35 
 
 
373 aa  332  5e-90  Anaeromyxobacter sp. K  Bacteria  normal  0.513182  n/a   
 
 
-
 
NC_010831  Cphamn1_2349  carbamoyl phosphate synthase small subunit  47.62 
 
 
366 aa  332  8e-90  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_4055  carbamoyl-phosphate synthase, small subunit  48.93 
 
 
386 aa  331  2e-89  Roseiflexus sp. RS-1  Bacteria  normal  0.103191  normal 
 
 
-
 
NC_009675  Anae109_2191  carbamoyl phosphate synthase small subunit  46.17 
 
 
372 aa  330  2e-89  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.352304 
 
 
-
 
NC_011891  A2cp1_2328  carbamoyl phosphate synthase small subunit  47.35 
 
 
373 aa  330  3e-89  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011059  Paes_2113  carbamoyl phosphate synthase small subunit  46.3 
 
 
371 aa  330  3e-89  Prosthecochloris aestuarii DSM 271  Bacteria  unclonable  0.000000000982338  normal  0.988223 
 
 
-
 
NC_009767  Rcas_3359  carbamoyl-phosphate synthase, small subunit  48.53 
 
 
386 aa  327  1.0000000000000001e-88  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.663891  normal 
 
 
-
 
NC_013161  Cyan8802_0390  carbamoyl phosphate synthase small subunit  46.51 
 
 
380 aa  325  1e-87  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_0381  carbamoyl phosphate synthase small subunit  46.51 
 
 
380 aa  325  1e-87  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008261  CPF_2898  carbamoyl phosphate synthase small subunit  44.29 
 
 
349 aa  324  2e-87  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3019  carbamoyl-phosphate synthase small subunit  46.4 
 
 
377 aa  324  2e-87  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_011898  Ccel_2913  carbamoyl-phosphate synthase, small subunit  46.63 
 
 
351 aa  323  3e-87  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_2353  carbamoyl-phosphate synthase, small subunit  45.65 
 
 
358 aa  323  4e-87  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.00528586  normal 
 
 
-
 
NC_011060  Ppha_0218  carbamoyl phosphate synthase small subunit  47.2 
 
 
367 aa  322  7e-87  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_2577  carbamoyl phosphate synthase small subunit  44.02 
 
 
349 aa  322  8e-87  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_3196  carbamoyl phosphate synthase small subunit  46.01 
 
 
379 aa  321  9.999999999999999e-87  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0368063 
 
 
-
 
NC_007514  Cag_0107  carbamoyl phosphate synthase small subunit  45.91 
 
 
367 aa  321  1.9999999999999998e-86  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1916  carbamoyl phosphate synthase small subunit  45.72 
 
 
364 aa  320  3e-86  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008025  Dgeo_2060  carbamoyl phosphate synthase small subunit  45.38 
 
 
394 aa  318  9e-86  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.745912 
 
 
-
 
NC_008148  Rxyl_1478  carbamoyl-phosphate synthase small subunit  46.75 
 
 
369 aa  318  1e-85  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.515532  n/a   
 
 
-
 
NC_011899  Hore_02880  carbamoyl-phosphate synthase, small subunit  45.19 
 
 
364 aa  317  2e-85  Halothermothrix orenii H 168  Bacteria  normal  0.422195  n/a   
 
 
-
 
NC_010730  SYO3AOP1_1361  carbamoyl phosphate synthase small subunit  45.72 
 
 
376 aa  315  6e-85  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_007516  Syncc9605_1152  carbamoyl phosphate synthase small subunit  45.21 
 
 
386 aa  315  9e-85  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_2002  carbamoyl-phosphate synthase, small subunit  45.82 
 
 
379 aa  315  9.999999999999999e-85  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_2536  carbamoyl phosphate synthase small subunit  45.43 
 
 
373 aa  314  1.9999999999999998e-84  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.0261621  n/a   
 
 
-
 
NC_011725  BCB4264_A3985  carbamoyl phosphate synthase small subunit  44.09 
 
 
365 aa  313  1.9999999999999998e-84  Bacillus cereus B4264  Bacteria  normal  0.289727  n/a   
 
 
-
 
NC_014212  Mesil_2356  carbamoyl-phosphate synthase, small subunit  44.95 
 
 
388 aa  314  1.9999999999999998e-84  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009455  DehaBAV1_1011  carbamoyl phosphate synthase small subunit  44.65 
 
 
364 aa  312  6.999999999999999e-84  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_0615  carbamoyl-phosphate synthase, small subunit  45.33 
 
 
360 aa  311  7.999999999999999e-84  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_3932  carbamoyl phosphate synthase small subunit  43.82 
 
 
365 aa  311  9e-84  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A3936  carbamoyl phosphate synthase small subunit  43.82 
 
 
365 aa  311  9e-84  Bacillus cereus AH187  Bacteria  normal  0.0146429  n/a   
 
 
-
 
NC_006274  BCZK3646  carbamoyl phosphate synthase small subunit  43.55 
 
 
365 aa  311  1e-83  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS3738  carbamoyl phosphate synthase small subunit  43.55 
 
 
365 aa  311  2e-83  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_3629  carbamoyl phosphate synthase small subunit  43.55 
 
 
365 aa  311  2e-83  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4026  carbamoyl phosphate synthase small subunit  43.55 
 
 
365 aa  311  2e-83  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0667428  n/a   
 
 
-
 
NC_011772  BCG9842_B1256  carbamoyl phosphate synthase small subunit  43.82 
 
 
365 aa  310  2e-83  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_3901  carbamoyl phosphate synthase small subunit  43.55 
 
 
365 aa  311  2e-83  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000355158 
 
 
-
 
NC_010184  BcerKBAB4_3714  carbamoyl phosphate synthase small subunit  44.09 
 
 
365 aa  310  2.9999999999999997e-83  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.971369  n/a   
 
 
-
 
NC_009012  Cthe_0950  carbamoyl-phosphate synthase small subunit  45.38 
 
 
357 aa  310  2.9999999999999997e-83  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_008820  P9303_15771  carbamoyl phosphate synthase small subunit  44.33 
 
 
379 aa  309  5.9999999999999995e-83  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_011830  Dhaf_3203  carbamoyl-phosphate synthase, small subunit  44.39 
 
 
368 aa  309  5.9999999999999995e-83  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0975  carbamoyl-phosphate synthase, small subunit  46.22 
 
 
379 aa  308  8e-83  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_1915  carbamoyl-phosphate synthase, small subunit  43.68 
 
 
390 aa  308  1.0000000000000001e-82  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_2703  carbamoyl-phosphate synthase small subunit  46.81 
 
 
388 aa  307  2.0000000000000002e-82  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.614253 
 
 
-
 
NC_009635  Maeo_0466  carbamoyl phosphate synthase small subunit  43.97 
 
 
357 aa  307  2.0000000000000002e-82  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_010531  Pnec_0848  carbamoyl-phosphate synthase, small subunit  44.65 
 
 
398 aa  306  4.0000000000000004e-82  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal  0.287672 
 
 
-
 
NC_008709  Ping_0896  carbamoyl-phosphate synthase, small subunit  43.34 
 
 
378 aa  306  4.0000000000000004e-82  Psychromonas ingrahamii 37  Bacteria  normal  0.348294  normal  0.560722 
 
 
-
 
NC_011761  AFE_0640  carbamoyl-phosphate synthase, small subunit  44.65 
 
 
380 aa  306  5.0000000000000004e-82  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_0790  carbamoyl-phosphate synthase, small subunit  44.65 
 
 
380 aa  306  5.0000000000000004e-82  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_2823  carbamoyl-phosphate synthase, small subunit  44.27 
 
 
394 aa  305  1.0000000000000001e-81  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007298  Daro_0938  carbamoyl-phosphate synthase small subunit  44.72 
 
 
385 aa  303  2.0000000000000002e-81  Dechloromonas aromatica RCB  Bacteria  normal  0.742428  normal 
 
 
-
 
NC_010320  Teth514_0661  carbamoyl phosphate synthase small subunit  43.82 
 
 
356 aa  304  2.0000000000000002e-81  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_1709  carbamoyl phosphate synthase small subunit  41.94 
 
 
357 aa  304  2.0000000000000002e-81  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET1201  carbamoyl phosphate synthase small subunit  44.62 
 
 
364 aa  303  3.0000000000000004e-81  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_009379  Pnuc_1019  carbamoyl-phosphate synthase, small subunit  45.93 
 
 
397 aa  303  3.0000000000000004e-81  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_984  carbamoyl-phosphate synthase, small subunit  45.16 
 
 
364 aa  303  3.0000000000000004e-81  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_007513  Syncc9902_1307  carbamoyl phosphate synthase small subunit  44.21 
 
 
398 aa  303  4.0000000000000003e-81  Synechococcus sp. CC9902  Bacteria  normal  0.786161  n/a   
 
 
-
 
NC_013174  Jden_1322  carbamoyl-phosphate synthase, small subunit  43.51 
 
 
414 aa  302  6.000000000000001e-81  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.125881 
 
 
-
 
NC_011126  HY04AAS1_0951  carbamoyl-phosphate synthase, small subunit  43.36 
 
 
352 aa  302  8.000000000000001e-81  Hydrogenobaculum sp. Y04AAS1  Bacteria  hitchhiker  0.00000000113034  n/a   
 
 
-
 
NC_009513  Lreu_0086  carbamoyl phosphate synthase small subunit  42.74 
 
 
362 aa  301  1e-80  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.000481793  n/a   
 
 
-
 
NC_009380  Strop_1855  carbamoyl-phosphate synthase, small subunit  44.27 
 
 
386 aa  301  1e-80  Salinispora tropica CNB-440  Bacteria  normal  0.459247  normal 
 
 
-
 
NC_009953  Sare_1848  carbamoyl-phosphate synthase, small subunit  43.9 
 
 
386 aa  300  2e-80  Salinispora arenicola CNS-205  Bacteria  normal  0.293096  normal 
 
 
-
 
NC_009976  P9211_06931  carbamoyl phosphate synthase small subunit  43.2 
 
 
380 aa  300  2e-80  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  0.0298336  normal  0.187512 
 
 
-
 
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