More than 300 homologs were found in PanDaTox collection
for query gene Dgeo_2060 on replicon NC_008025
Organism: Deinococcus geothermalis DSM 11300



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008025  Dgeo_2060  carbamoyl phosphate synthase small subunit  100 
 
 
394 aa  810    Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.745912 
 
 
-
 
NC_013946  Mrub_2703  carbamoyl-phosphate synthase small subunit  68.8 
 
 
388 aa  556  1e-157  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.614253 
 
 
-
 
NC_014212  Mesil_2356  carbamoyl-phosphate synthase, small subunit  68.8 
 
 
388 aa  553  1e-156  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_1613  carbamoyl phosphate synthase small subunit  52.31 
 
 
376 aa  389  1e-107  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0266912  n/a   
 
 
-
 
NC_014148  Plim_2032  carbamoyl-phosphate synthase, small subunit  51.68 
 
 
383 aa  384  1e-105  Planctomyces limnophilus DSM 3776  Bacteria  unclonable  0.000000277554  n/a   
 
 
-
 
NC_008554  Sfum_0009  carbamoyl phosphate synthase small subunit  49.36 
 
 
391 aa  384  1e-105  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.35972  normal 
 
 
-
 
NC_008009  Acid345_2194  carbamoyl-phosphate synthase small subunit  50 
 
 
373 aa  373  1e-102  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_2240  carbamoyl phosphate synthase small subunit  49.74 
 
 
373 aa  368  1e-101  Anaeromyxobacter sp. K  Bacteria  normal  0.513182  n/a   
 
 
-
 
NC_009523  RoseRS_4055  carbamoyl-phosphate synthase, small subunit  51.04 
 
 
386 aa  370  1e-101  Roseiflexus sp. RS-1  Bacteria  normal  0.103191  normal 
 
 
-
 
NC_011891  A2cp1_2328  carbamoyl phosphate synthase small subunit  49.74 
 
 
373 aa  368  1e-100  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2643  carbamoyl-phosphate synthase, small subunit  49.87 
 
 
374 aa  365  1e-100  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_1620  carbamoyl phosphate synthase small subunit  49.48 
 
 
373 aa  365  1e-100  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.394714  n/a   
 
 
-
 
NC_009675  Anae109_2191  carbamoyl phosphate synthase small subunit  49.61 
 
 
372 aa  367  1e-100  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.352304 
 
 
-
 
NC_009253  Dred_1683  carbamoyl-phosphate synthase, small subunit  51.35 
 
 
359 aa  367  1e-100  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000104913  n/a   
 
 
-
 
NC_009943  Dole_0120  carbamoyl-phosphate synthase, small subunit  49.74 
 
 
380 aa  365  1e-100  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3359  carbamoyl-phosphate synthase, small subunit  49.87 
 
 
386 aa  364  2e-99  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.663891  normal 
 
 
-
 
NC_013385  Adeg_0372  carbamoyl-phosphate synthase, small subunit  50.27 
 
 
359 aa  363  4e-99  Ammonifex degensii KC4  Bacteria  normal  0.386907  n/a   
 
 
-
 
NC_011146  Gbem_1898  carbamoyl phosphate synthase small subunit  48.3 
 
 
374 aa  358  9.999999999999999e-98  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010655  Amuc_1250  carbamoyl-phosphate synthase, small subunit  49.34 
 
 
372 aa  358  9.999999999999999e-98  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_2310  carbamoyl phosphate synthase small subunit  48.04 
 
 
374 aa  357  9.999999999999999e-98  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008576  Mmc1_3019  carbamoyl-phosphate synthase small subunit  48.03 
 
 
377 aa  357  1.9999999999999998e-97  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_2353  carbamoyl-phosphate synthase, small subunit  48.91 
 
 
358 aa  356  3.9999999999999996e-97  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.00528586  normal 
 
 
-
 
NC_007644  Moth_0881  carbamoyl-phosphate synthase small subunit  51.07 
 
 
361 aa  355  5.999999999999999e-97  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_1858  carbamoyl phosphate synthase small subunit  48.3 
 
 
373 aa  354  2e-96  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009379  Pnuc_1019  carbamoyl-phosphate synthase, small subunit  48.07 
 
 
397 aa  352  5e-96  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1273  carbamoyl phosphate synthase small subunit  48.68 
 
 
374 aa  351  1e-95  Geobacter sulfurreducens PCA  Bacteria  normal  0.0567002  n/a   
 
 
-
 
NC_007512  Plut_0156  carbamoyl phosphate synthase small subunit  49.32 
 
 
369 aa  349  4e-95  Chlorobium luteolum DSM 273  Bacteria  normal  0.983052  normal  0.416855 
 
 
-
 
NC_007517  Gmet_1771  carbamoyl phosphate synthase small subunit  47.63 
 
 
374 aa  349  5e-95  Geobacter metallireducens GS-15  Bacteria  normal  0.0224697  normal  0.089739 
 
 
-
 
NC_011884  Cyan7425_1942  carbamoyl phosphate synthase small subunit  48.83 
 
 
389 aa  349  5e-95  Cyanothece sp. PCC 7425  Bacteria  normal  0.230816  normal  0.202912 
 
 
-
 
NC_010730  SYO3AOP1_1361  carbamoyl phosphate synthase small subunit  47.29 
 
 
376 aa  348  7e-95  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_1307  carbamoyl-phosphate synthase, small subunit  49.73 
 
 
368 aa  348  1e-94  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_2459  carbamoyl phosphate synthase small subunit  48.13 
 
 
369 aa  348  1e-94  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.420642  n/a   
 
 
-
 
NC_008609  Ppro_2527  carbamoyl phosphate synthase small subunit  46.75 
 
 
373 aa  347  2e-94  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010531  Pnec_0848  carbamoyl-phosphate synthase, small subunit  47.34 
 
 
398 aa  346  5e-94  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal  0.287672 
 
 
-
 
NC_010831  Cphamn1_2349  carbamoyl phosphate synthase small subunit  49.33 
 
 
366 aa  345  6e-94  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I2783  carbamoyl phosphate synthase small subunit  49.48 
 
 
381 aa  345  1e-93  Burkholderia thailandensis E264  Bacteria  normal  0.259596  n/a   
 
 
-
 
NC_010424  Daud_1303  carbamoyl-phosphate synthase, small subunit  49.06 
 
 
359 aa  343  2e-93  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0780078  n/a   
 
 
-
 
NC_009972  Haur_4242  carbamoyl-phosphate synthase, small subunit  47.34 
 
 
376 aa  344  2e-93  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0938  carbamoyl-phosphate synthase small subunit  49.34 
 
 
385 aa  343  2.9999999999999997e-93  Dechloromonas aromatica RCB  Bacteria  normal  0.742428  normal 
 
 
-
 
NC_007514  Cag_0107  carbamoyl phosphate synthase small subunit  48.14 
 
 
367 aa  343  4e-93  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0268  carbamoyl phosphate synthase small subunit  49.34 
 
 
375 aa  343  4e-93  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.583908 
 
 
-
 
NC_010571  Oter_1915  carbamoyl-phosphate synthase, small subunit  46.85 
 
 
390 aa  342  5e-93  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_006348  BMA0770  carbamoyl phosphate synthase small subunit  49.48 
 
 
381 aa  342  5e-93  Burkholderia mallei ATCC 23344  Bacteria  normal  0.76287  n/a   
 
 
-
 
NC_009076  BURPS1106A_1505  carbamoyl phosphate synthase small subunit  49.48 
 
 
381 aa  342  5e-93  Burkholderia pseudomallei 1106a  Bacteria  normal  0.188244  n/a   
 
 
-
 
NC_009080  BMA10247_0564  carbamoyl phosphate synthase small subunit  49.48 
 
 
381 aa  342  5e-93  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A0587  carbamoyl phosphate synthase small subunit  49.48 
 
 
381 aa  342  5e-93  Burkholderia mallei NCTC 10229  Bacteria  normal  0.368687  n/a   
 
 
-
 
NC_012034  Athe_1540  carbamoyl-phosphate synthase, small subunit  45.82 
 
 
356 aa  342  5e-93  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1281  carbamoyl phosphate synthase small subunit  49.48 
 
 
381 aa  342  5e-93  Burkholderia mallei SAVP1  Bacteria  normal  0.697849  n/a   
 
 
-
 
NC_009074  BURPS668_1475  carbamoyl phosphate synthase small subunit  49.48 
 
 
381 aa  342  5.999999999999999e-93  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_1608  carbamoyl phosphate synthase small subunit  49.48 
 
 
381 aa  342  8e-93  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_2122  carbamoyl phosphate synthase small subunit  48.96 
 
 
391 aa  342  8e-93  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.618886 
 
 
-
 
NC_010814  Glov_2083  carbamoyl phosphate synthase small subunit  47.01 
 
 
373 aa  342  8e-93  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2370  carbamoyl phosphate synthase small subunit  48.16 
 
 
376 aa  341  1e-92  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.82733 
 
 
-
 
NC_008825  Mpe_A1261  carbamoyl-phosphate synthase small subunit  50.13 
 
 
383 aa  341  1e-92  Methylibium petroleiphilum PM1  Bacteria  normal  decreased coverage  0.00672288 
 
 
-
 
NC_008820  P9303_15771  carbamoyl phosphate synthase small subunit  48.45 
 
 
379 aa  341  1e-92  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_011060  Ppha_0218  carbamoyl phosphate synthase small subunit  47.33 
 
 
367 aa  342  1e-92  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_2823  carbamoyl-phosphate synthase, small subunit  49.35 
 
 
394 aa  341  2e-92  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_011898  Ccel_2913  carbamoyl-phosphate synthase, small subunit  47.27 
 
 
351 aa  340  4e-92  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_0809  carbamoyl phosphate synthase small subunit  48.32 
 
 
380 aa  338  8e-92  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_1290  carbamoyl phosphate synthase small subunit  48.32 
 
 
380 aa  338  8e-92  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0948613  n/a   
 
 
-
 
NC_007510  Bcep18194_A4432  carbamoyl phosphate synthase small subunit  48.32 
 
 
380 aa  338  9e-92  Burkholderia sp. 383  Bacteria  hitchhiker  0.00120805  normal 
 
 
-
 
NC_014150  Bmur_2483  carbamoyl-phosphate synthase, small subunit  46.13 
 
 
359 aa  338  9e-92  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.0000863462  n/a   
 
 
-
 
NC_010508  Bcenmc03_1261  carbamoyl phosphate synthase small subunit  48.69 
 
 
380 aa  338  9.999999999999999e-92  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0131767  normal  0.191599 
 
 
-
 
NC_007413  Ava_4410  carbamoyl phosphate synthase small subunit  46.19 
 
 
388 aa  338  9.999999999999999e-92  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.924948 
 
 
-
 
NC_011126  HY04AAS1_0951  carbamoyl-phosphate synthase, small subunit  49.18 
 
 
352 aa  338  9.999999999999999e-92  Hydrogenobaculum sp. Y04AAS1  Bacteria  hitchhiker  0.00000000113034  n/a   
 
 
-
 
NC_012856  Rpic12D_1728  carbamoyl phosphate synthase small subunit  49.74 
 
 
378 aa  337  1.9999999999999998e-91  Ralstonia pickettii 12D  Bacteria  normal  0.590257  normal  0.961099 
 
 
-
 
NC_011729  PCC7424_3196  carbamoyl phosphate synthase small subunit  48.03 
 
 
379 aa  337  1.9999999999999998e-91  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0368063 
 
 
-
 
NC_007516  Syncc9605_1152  carbamoyl phosphate synthase small subunit  48.43 
 
 
386 aa  337  1.9999999999999998e-91  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_1776  carbamoyl-phosphate synthase, small subunit  48.19 
 
 
379 aa  337  1.9999999999999998e-91  Halorhodospira halophila SL1  Bacteria  normal  0.0616181  n/a   
 
 
-
 
NC_007948  Bpro_2679  carbamoyl phosphate synthase small subunit  48.83 
 
 
401 aa  337  1.9999999999999998e-91  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_010803  Clim_2299  carbamoyl phosphate synthase small subunit  47.86 
 
 
369 aa  337  1.9999999999999998e-91  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.0000401664  n/a   
 
 
-
 
NC_013223  Dret_1071  carbamoyl-phosphate synthase, small subunit  46.46 
 
 
369 aa  336  2.9999999999999997e-91  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0749952  normal  0.228018 
 
 
-
 
NC_010682  Rpic_2036  carbamoyl phosphate synthase small subunit  49.48 
 
 
378 aa  337  2.9999999999999997e-91  Ralstonia pickettii 12J  Bacteria  normal  0.534876  normal 
 
 
-
 
NC_013501  Rmar_2002  carbamoyl-phosphate synthase, small subunit  48.1 
 
 
379 aa  337  2.9999999999999997e-91  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_0878  carbamoyl-phosphate synthase, small subunit  48.32 
 
 
378 aa  336  3.9999999999999995e-91  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_2310  carbamoyl phosphate synthase small subunit  47.68 
 
 
384 aa  336  5e-91  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.162276 
 
 
-
 
NC_008781  Pnap_1774  carbamoyl phosphate synthase small subunit  47.61 
 
 
393 aa  335  5.999999999999999e-91  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.0283036 
 
 
-
 
NC_009783  VIBHAR_00912  carbamoyl phosphate synthase small subunit  48.56 
 
 
416 aa  335  7e-91  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011726  PCC8801_0381  carbamoyl phosphate synthase small subunit  48.29 
 
 
380 aa  335  1e-90  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011059  Paes_2113  carbamoyl phosphate synthase small subunit  46.17 
 
 
371 aa  335  1e-90  Prosthecochloris aestuarii DSM 271  Bacteria  unclonable  0.000000000982338  normal  0.988223 
 
 
-
 
NC_013161  Cyan8802_0390  carbamoyl phosphate synthase small subunit  48.29 
 
 
380 aa  335  1e-90  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_0873  carbamoyl phosphate synthase small subunit  48.83 
 
 
384 aa  335  1e-90  Burkholderia phymatum STM815  Bacteria  normal  0.644445  normal  0.264285 
 
 
-
 
NC_007912  Sde_2729  carbamoyl-phosphate synthase small subunit  47.76 
 
 
387 aa  333  2e-90  Saccharophagus degradans 2-40  Bacteria  normal  0.422158  normal 
 
 
-
 
NC_008228  Patl_2215  carbamoyl-phosphate synthase, small subunit  48.3 
 
 
381 aa  334  2e-90  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.000311671  n/a   
 
 
-
 
NC_014248  Aazo_2282  carbamoyl-phosphate synthase small subunit  46.34 
 
 
385 aa  334  2e-90  'Nostoc azollae' 0708  Bacteria  normal  0.332421  n/a   
 
 
-
 
NC_007614  Nmul_A0478  carbamoyl-phosphate synthase, small subunit  47.79 
 
 
383 aa  333  3e-90  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_0950  carbamoyl-phosphate synthase small subunit  45.82 
 
 
357 aa  333  3e-90  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_0790  carbamoyl-phosphate synthase, small subunit  44.59 
 
 
380 aa  333  3e-90  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_011761  AFE_0640  carbamoyl-phosphate synthase, small subunit  44.59 
 
 
380 aa  333  3e-90  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0975  carbamoyl-phosphate synthase, small subunit  48.55 
 
 
379 aa  333  3e-90  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_3646  carbamoyl phosphate synthase small subunit  47.23 
 
 
375 aa  333  4e-90  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_2030  carbamoyl phosphate synthase small subunit  48.95 
 
 
380 aa  333  4e-90  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.115427  normal 
 
 
-
 
NC_008709  Ping_0896  carbamoyl-phosphate synthase, small subunit  45.99 
 
 
378 aa  333  4e-90  Psychromonas ingrahamii 37  Bacteria  normal  0.348294  normal  0.560722 
 
 
-
 
NC_002977  MCA1853  carbamoyl phosphate synthase small subunit  48.05 
 
 
378 aa  332  6e-90  Methylococcus capsulatus str. Bath  Bacteria  normal  0.0936768  n/a   
 
 
-
 
NC_008686  Pden_2165  carbamoyl phosphate synthase small subunit  48.85 
 
 
382 aa  332  6e-90  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A2885  carbamoyl-phosphate synthase small subunit  49.74 
 
 
389 aa  332  8e-90  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_2868  carbamoyl phosphate synthase small subunit  49.08 
 
 
384 aa  332  8e-90  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.00228162  normal 
 
 
-
 
NC_007951  Bxe_A1256  carbamoyl phosphate synthase small subunit  48.82 
 
 
391 aa  332  8e-90  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_1167  carbamoyl phosphate synthase small subunit  48.58 
 
 
380 aa  332  8e-90  Burkholderia ambifaria AMMD  Bacteria  normal  0.278191  n/a   
 
 
-
 
NC_010551  BamMC406_1179  carbamoyl phosphate synthase small subunit  48.58 
 
 
381 aa  332  9e-90  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.381236 
 
 
-
 
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