| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1179 |
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| Symbol | |
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| ID | 6178842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1302144 |
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| End bp | 1303289 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641680935 |
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| Product | carbamoyl phosphate synthase small subunit |
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| Protein accession | YP_001807886 |
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| Protein GI | 172060234 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.381236 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTGCCGT CTTTTTCTCC CGCCTTGCTT GCACTCGCCG ACGGCACGGT CTTTCGTGGT
TATTCGATCG GGGCCGAAGG CCATACGATC GGTGAAGTCG TGTTCAATAC CGCGATTACC
GGCTATCAGG AAATCCTGAC CGATCCGAGC TACGCGCGTC AGATCGTCAC GCTCACCTAC
CCGCATATCG GCAACGTCGG CATCAACGCC GAAGACGTCG AAGCCACGAA AGTCCATGCC
GCCGGCCTGA TCATCCGTGA TCTGCCCACG CTCGCATCGA ACTTCCGCAT GGACCGCACG
CTCGGCGACT ACCTGCGCGA CGAAGGCGTC GTCGCGATCG CCGGCATCGA TACCCGCAAG
CTGACCCGTA TCCTGCGCGA CAAGGGCGCG CAGAACGGCT GCATCCTGGC CGGTTCGGAC
GACGAGGCGA AGGCGATCGA GCTCGCGCGC TCGTTCCCGG GCCTCGCCGG CATGGATCTC
GCGAAGGTCG TGTCGACTAC CAAGCCGTTC GAGTGGAAGC AGACCGAATG GCGCCTCGAA
GGCGGCTACG GGATGCAGGA ATCGCCGAAG TACCGCGTCG TCGCGTACGA TTTCGGCGTC
AAGTACAACA TCCTGCGCAT GCTCGCGGAA CGCGGCTGCC AGGTGACGGT GCTGCCGGCG
CAGGCCAGCG CGGCCGACGC GCTCGCGCTG AATCCGGACG GCATCTTCCT GTCGAACGGC
CCCGGCGACC CGGAGCCGTG CGACTACGCG ATCGCGGCCA CGAAGGAATT CATCGAGCGC
GGCGTGCCGA CCTTCGGCAT CTGCCTCGGC CACCAGATCA TGGGCCTCGC GGTCGGCGCC
AAGACGCTGA AGATGAAGAC GGGCCACCAC GGCGCGAACC ATCCGGTGAA GGATCTCGGC
GACGGCCGCG TGGTCATCAC GTCGCAGAAC CACGGCTTCG CGGTCGACGC GGATTCGCTG
CCGGCCAACG CGCGCGTGAC GCACGTGTCG CTGTTCGACG GCACGCTGCA GGGCTTCGAG
CTGACCGACA AGCCGGCATT CTGCTTCCAG GGCCACCCGG AAGCGTCGCC CGGCCCGCAC
GACATCGGCT ATCTGTTCGA CCGTTTCACC GCCCTGATGG ACGCGGCGCA GCAGCGCAAC
GCCTGA
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| Protein sequence | MLPSFSPALL ALADGTVFRG YSIGAEGHTI GEVVFNTAIT GYQEILTDPS YARQIVTLTY
PHIGNVGINA EDVEATKVHA AGLIIRDLPT LASNFRMDRT LGDYLRDEGV VAIAGIDTRK
LTRILRDKGA QNGCILAGSD DEAKAIELAR SFPGLAGMDL AKVVSTTKPF EWKQTEWRLE
GGYGMQESPK YRVVAYDFGV KYNILRMLAE RGCQVTVLPA QASAADALAL NPDGIFLSNG
PGDPEPCDYA IAATKEFIER GVPTFGICLG HQIMGLAVGA KTLKMKTGHH GANHPVKDLG
DGRVVITSQN HGFAVDADSL PANARVTHVS LFDGTLQGFE LTDKPAFCFQ GHPEASPGPH
DIGYLFDRFT ALMDAAQQRN A
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