Gene Dvul_0268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0268 
Symbol 
ID4663572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp328840 
End bp329967 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content64% 
IMG OID639818465 
Productcarbamoyl phosphate synthase small subunit 
Protein accessionYP_965719 
Protein GI120601319 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0505] Carbamoylphosphate synthase small subunit 
TIGRFAM ID[TIGR01368] carbamoyl-phosphate synthase, small subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.583908 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGCAT TGCTGGCACT GGAAGACGGC TTCGTGCTTG AGGGACGTTC CTTCACCGGC 
CCCGGCGAGA CGGGGGGCGA GGCGATCTTC AACACCGGCA TGACCGGCTA TCAGGAAGTC
CTTACGGATC CTTCCTACGC AGGGCAGATG GTCTGCATGA CCTATCCGCT GGTGGGCAAC
TATGGCGTTA CCCGCGAGGA CATGGAATCG GGCAAGGTGC ACGTCGAGGC GTTCATCGTC
AAGGAATGCT GCAAGGTGCC CTCCAACTGG CGTTCCGAGA TATCGCTGCC CGACTACCTC
AAGCGGCACG GCGTGATGGG CATCGAAGGC ATCGACACGC GGGCACTCAC GCGCCATCTG
CGCATCCACG GTGCCATGCG GGGCGTCATC TCCACGCAGG AGACCGACCC GGCGCGTCTT
GTCGAACGCG CTCGTGCCCT GCCGTCCATG GAGGGGCAGA ACCTCGTCAC CCGCGTCGCC
CCCGCAGCCC CCTATCGCTG GGACGGTGAG CGTCCGCAGG CCGTGACCCT CGAACCCGGC
GGTTGCGCAT GGGTCGGCAA GGGGCCGCGT CTCGTGGTGT ACGACTTCGG CATCAAGTGG
AACATCCTGC GCCTTCTCGC CCAGCAGGGC TTCGACATGC TGGTTGTGCC CCCGTCCTTC
AAGGCCGCTG ACGTGGCGGC GGTGGGCGCA CAGGCCGTCT TTCTCTCCAA CGGCCCCGGC
GACCCGGCAA CACTGAAGGA TGAGATCGCT GAAATCGCGA AGCTGGCGCA GACCTATCCC
ACGGCGGGCA TCTGCCTCGG GCATCAGCTT CTCGGCCATG CCCTTGGCGG GCGCACCATG
AAGCTCAAGT TCGGTCATCA TGGCTGCAAC CACCCCGTGA AGGACCTCAC CACGGGGCGC
ATCGAGATAT CTTCACAGAA TCACGGCTTC TGCGTGGACA TCGACAGCCT CACTGACGTA
GAAATCACCC ATGTGAACCT CAACGACGGC ACCCTTGAGG GATTCGCCCA TAAGACGAAG
CCCGTCATCG CCGTCCAGCA CCACCCCGAG GCGAGCCCCG GCCCCAACGA CAGCCGGTAC
TTCTTCGCCC GGTTCAGGAA CATGGTGCGT GAGGCGGCAG GCTGCTAA
 
Protein sequence
MRALLALEDG FVLEGRSFTG PGETGGEAIF NTGMTGYQEV LTDPSYAGQM VCMTYPLVGN 
YGVTREDMES GKVHVEAFIV KECCKVPSNW RSEISLPDYL KRHGVMGIEG IDTRALTRHL
RIHGAMRGVI STQETDPARL VERARALPSM EGQNLVTRVA PAAPYRWDGE RPQAVTLEPG
GCAWVGKGPR LVVYDFGIKW NILRLLAQQG FDMLVVPPSF KAADVAAVGA QAVFLSNGPG
DPATLKDEIA EIAKLAQTYP TAGICLGHQL LGHALGGRTM KLKFGHHGCN HPVKDLTTGR
IEISSQNHGF CVDIDSLTDV EITHVNLNDG TLEGFAHKTK PVIAVQHHPE ASPGPNDSRY
FFARFRNMVR EAAGC