| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0951 |
|---|
| Symbol | |
|---|
| ID | 6743763 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Hydrogenobaculum sp. Y04AAS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011126 |
|---|
| Strand | + |
|---|
| Start bp | 892983 |
|---|
| End bp | 894041 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 642750757 |
|---|
| Product | carbamoyl-phosphate synthase, small subunit |
|---|
| Protein accession | YP_002121616 |
|---|
| Protein GI | 195953326 |
|---|
| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
|---|
| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000000113034 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCAA TCTTATGTCT TGAAGATGGT ACATACTTTA TAGGCAAATC TTTTGGCAAA
ACTGGGGAAT GTTTTGGAGA AGTGGTATTT AACACCGCAA TAACAGGTTA TCAAGAGATT
ATAACAGACC CCTCTTACAA AGGCCAAATA GTGGTGATGA CAACCCCCCA GATAGGGAAT
TACGGTGTAA ACAACAATGT AGAGTCAGAT TCCCCCAAAG TCGCAGGTTT CGTGGTAAGG
GAAATATCAA AGATAGATAG CAATCATACG TCTATAGACA CTCTATCCTC TTACCTTGAA
AAGCACAACA TAGTAGGGAT ATCAAACATA GACACGAGGG CTTTGGTAAA AATACTACGA
GAAAGAGGCG TTACCAGAGG ATTTATATCT ACTATAGATT TAAAGCCAAA AGCTATATAC
GAAAAGGTAA GGATGGTAAA AGATATATCT TCTCTTGATT TGGTATCTGA GGTAACTACG
GATAAGATTT ATAAAGTTCA CGCTTATAAA AGCTCAAAAC ACTTTGTATT GGTAGATTTT
GGTATAAAAC AAAGTATAAT AAGATATCTT GTAGAAAATG ACATCACCTG CACCGTAGTA
CCAGCAAACA CACCAAAAGA AGATATAGAA GCTATGAATC CAGATGCAGT GTTTTTGTCA
AATGGGCCTG GAGACCCAGC AAACGTGCTA AACGGTATCG CCATAGCCAA ACATTTTTTT
GGTAAAAAGC CCATATTTGG TATATGTCTT GGTCATCAAA TCATGTCTTT GGCAATTGGA
GCCAAAACTT ACAAGTTAAA ATTTGGGCAT CACGGAGCCA ATCATCCTGT TAAGGATATG
AGAAACAATA GAGTAGTAAT AACTTCTCAA AATCACAATT ACGCCGTAGA AGATTTACCG
GATTTCATGG AAGTCACACA TATAAACCTT TTAGACAACA CCATAGAGGG TATGATCCAC
AAAAATATCC CATATTACTC TGTGCAATTT CACCCAGAGG CCTCACCTGG ACCTCACGAT
GCTCTTTATA TATTTAAAGA GTTCAAAGAT ATGGCTTAA
|
|---|
| Protein sequence | MKAILCLEDG TYFIGKSFGK TGECFGEVVF NTAITGYQEI ITDPSYKGQI VVMTTPQIGN
YGVNNNVESD SPKVAGFVVR EISKIDSNHT SIDTLSSYLE KHNIVGISNI DTRALVKILR
ERGVTRGFIS TIDLKPKAIY EKVRMVKDIS SLDLVSEVTT DKIYKVHAYK SSKHFVLVDF
GIKQSIIRYL VENDITCTVV PANTPKEDIE AMNPDAVFLS NGPGDPANVL NGIAIAKHFF
GKKPIFGICL GHQIMSLAIG AKTYKLKFGH HGANHPVKDM RNNRVVITSQ NHNYAVEDLP
DFMEVTHINL LDNTIEGMIH KNIPYYSVQF HPEASPGPHD ALYIFKEFKD MA
|
|---|
| |