| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_2060 |
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| Symbol | |
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| ID | 4058406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Deinococcus geothermalis DSM 11300 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008025 |
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| Strand | - |
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| Start bp | 2167114 |
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| End bp | 2168298 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641231099 |
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| Product | carbamoyl phosphate synthase small subunit |
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| Protein accession | YP_605523 |
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| Protein GI | 94986159 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.745912 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCGTA AGGAACGCGC GATTCTGGCG CTGGAAGACG GTACGGTGTA CCGCGGTTAT
GCTTTTGGCC ATCGCGGCGA GACGGTCGGG GAGGTCGTGT TCAACACCTC CATGACCGGG
TACCAGGAGA TCATGACCGA TCCCTCGTAC AACGGGCAGA TCGTGACCAT CACGTACCCG
CATGTGGGCA ACTACGGCGT GGCCATCTAC GACATGGAGA GCAACAAGCC CTACGTGCGA
GGCTTTATCG CGCGCGAGTT TTCCGGCGAG TACTCCAACC ACCGCGCGCA ACAGTCACTC
GAAGCCTTTA TGCAGCAGTA CGGCGTGGTG AGCATCCAAG GGATCGACAC GCGGGCGCTG
GTGCGGCGTC TTCGCACGGG CGGCGTGGTG AAGGGCGTGA TCGCTCACCG CTCCTACACG
CACCCCGAAG ACCCCTACGG CGAGTTCACC CCCGCTGAGG AGCAGATCTA CGTGCAGCGT
GCCCGCGACC ATCAGGACAT CGACGGGCAC GACATGACGA AGGAGGTCAC CACACCGCTG
CCCTACGCCT TCCCGACCCT GCGCCACGGC AAGCGCGTGG TGTTGATGGA TTTCGGCATC
AAGCACACCA TCATCGAACG GCTGGCGGAG GTGGGCATTG AACCCATTGT GGTGCCAGCA
CACACCACCC CGGCGCAGAT CATGGCCCTC CAGCCGCACG GCCTCTTTTT GTCGAACGGC
CCCGGGGACC CCGCTCCACT GGAATACGCG CACAAGACCG CCTGGGAACT GATGGGTCTG
CTGCCCACCT TTGGCATCTG CTTGGGCCAC CAGATTCTGG GTCTTGCGGC GGGCGGCCAG
ACCTTCAAGA TGAAGTTCGG GCACCGCGGA GGCAACCAGC CGGTGAAGAA CCTGCTCACC
GGGAATGTGG AGATCACCTC GCAGAACCAC GGCTACGCGG TGGACATCGC CTCCATCCCG
GACGGCGCCT TTGTCGCCAC CCACGTCAAC CTCAACGACG GCACGCTAGA AGGCATGGCT
CACAGCCGCT ATCCGGTCTT CTCGGTGCAG TACCACCCCG AGGCGTCCCC CGGTCCCCAC
GACAGCCGCT ACCTCTTTGA CCGCTTTATC GAGGAGATCG ATGCCTTCGA GGGCGCAAAC
GGTTCGCCGG TCCTGAAGGC TTCGGCGGGG CGGCTGGGGG TGTAG
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| Protein sequence | MIRKERAILA LEDGTVYRGY AFGHRGETVG EVVFNTSMTG YQEIMTDPSY NGQIVTITYP
HVGNYGVAIY DMESNKPYVR GFIAREFSGE YSNHRAQQSL EAFMQQYGVV SIQGIDTRAL
VRRLRTGGVV KGVIAHRSYT HPEDPYGEFT PAEEQIYVQR ARDHQDIDGH DMTKEVTTPL
PYAFPTLRHG KRVVLMDFGI KHTIIERLAE VGIEPIVVPA HTTPAQIMAL QPHGLFLSNG
PGDPAPLEYA HKTAWELMGL LPTFGICLGH QILGLAAGGQ TFKMKFGHRG GNQPVKNLLT
GNVEITSQNH GYAVDIASIP DGAFVATHVN LNDGTLEGMA HSRYPVFSVQ YHPEASPGPH
DSRYLFDRFI EEIDAFEGAN GSPVLKASAG RLGV
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