More than 300 homologs were found in PanDaTox collection
for query gene Dvul_0268 on replicon NC_008751
Organism: Desulfovibrio vulgaris DP4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007519  Dde_3646  carbamoyl phosphate synthase small subunit  83.16 
 
 
375 aa  656    Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2370  carbamoyl phosphate synthase small subunit  82.13 
 
 
376 aa  643    Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.82733 
 
 
-
 
NC_008751  Dvul_0268  carbamoyl phosphate synthase small subunit  100 
 
 
375 aa  779    Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.583908 
 
 
-
 
NC_011883  Ddes_1097  carbamoyl phosphate synthase small subunit  68.27 
 
 
376 aa  518  1e-146  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.643284  n/a   
 
 
-
 
NC_013173  Dbac_0133  carbamoyl-phosphate synthase, small subunit  66.76 
 
 
378 aa  521  1e-146  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_1071  carbamoyl-phosphate synthase, small subunit  62.33 
 
 
369 aa  477  1e-133  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0749952  normal  0.228018 
 
 
-
 
NC_009943  Dole_0120  carbamoyl-phosphate synthase, small subunit  58.89 
 
 
380 aa  438  9.999999999999999e-123  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1898  carbamoyl phosphate synthase small subunit  53.6 
 
 
374 aa  403  1e-111  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2310  carbamoyl phosphate synthase small subunit  53.33 
 
 
374 aa  401  9.999999999999999e-111  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008554  Sfum_0009  carbamoyl phosphate synthase small subunit  55.23 
 
 
391 aa  399  9.999999999999999e-111  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.35972  normal 
 
 
-
 
NC_002939  GSU1273  carbamoyl phosphate synthase small subunit  55.08 
 
 
374 aa  397  1e-109  Geobacter sulfurreducens PCA  Bacteria  normal  0.0567002  n/a   
 
 
-
 
NC_009483  Gura_1858  carbamoyl phosphate synthase small subunit  53.14 
 
 
373 aa  396  1e-109  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_010655  Amuc_1250  carbamoyl-phosphate synthase, small subunit  55.91 
 
 
372 aa  398  1e-109  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_0372  carbamoyl-phosphate synthase, small subunit  52.53 
 
 
359 aa  397  1e-109  Ammonifex degensii KC4  Bacteria  normal  0.386907  n/a   
 
 
-
 
NC_007517  Gmet_1771  carbamoyl phosphate synthase small subunit  53.74 
 
 
374 aa  392  1e-108  Geobacter metallireducens GS-15  Bacteria  normal  0.0224697  normal  0.089739 
 
 
-
 
NC_008609  Ppro_2527  carbamoyl phosphate synthase small subunit  55.12 
 
 
373 aa  394  1e-108  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1613  carbamoyl phosphate synthase small subunit  53.21 
 
 
376 aa  390  1e-107  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0266912  n/a   
 
 
-
 
NC_010814  Glov_2083  carbamoyl phosphate synthase small subunit  54.35 
 
 
373 aa  390  1e-107  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1683  carbamoyl-phosphate synthase, small subunit  51.08 
 
 
359 aa  385  1e-106  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000104913  n/a   
 
 
-
 
NC_009675  Anae109_2191  carbamoyl phosphate synthase small subunit  51.18 
 
 
372 aa  379  1e-104  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.352304 
 
 
-
 
NC_011145  AnaeK_2240  carbamoyl phosphate synthase small subunit  52.23 
 
 
373 aa  379  1e-104  Anaeromyxobacter sp. K  Bacteria  normal  0.513182  n/a   
 
 
-
 
NC_011891  A2cp1_2328  carbamoyl phosphate synthase small subunit  52.23 
 
 
373 aa  378  1e-104  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1620  carbamoyl phosphate synthase small subunit  52.11 
 
 
373 aa  378  1e-103  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.394714  n/a   
 
 
-
 
NC_014148  Plim_2032  carbamoyl-phosphate synthase, small subunit  51.09 
 
 
383 aa  375  1e-103  Planctomyces limnophilus DSM 3776  Bacteria  unclonable  0.000000277554  n/a   
 
 
-
 
NC_008009  Acid345_2194  carbamoyl-phosphate synthase small subunit  52.12 
 
 
373 aa  375  1e-103  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_1942  carbamoyl phosphate synthase small subunit  51.88 
 
 
389 aa  372  1e-102  Cyanothece sp. PCC 7425  Bacteria  normal  0.230816  normal  0.202912 
 
 
-
 
NC_009523  RoseRS_4055  carbamoyl-phosphate synthase, small subunit  52.62 
 
 
386 aa  369  1e-101  Roseiflexus sp. RS-1  Bacteria  normal  0.103191  normal 
 
 
-
 
NC_010424  Daud_1303  carbamoyl-phosphate synthase, small subunit  50.4 
 
 
359 aa  371  1e-101  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0780078  n/a   
 
 
-
 
NC_010483  TRQ2_0379  carbamoyl phosphate synthase small subunit  47.03 
 
 
392 aa  366  1e-100  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0362  carbamoyl phosphate synthase small subunit  47.03 
 
 
392 aa  366  1e-100  Thermotoga petrophila RKU-1  Bacteria  normal  0.0108123  n/a   
 
 
-
 
NC_012034  Athe_1540  carbamoyl-phosphate synthase, small subunit  48 
 
 
356 aa  364  1e-99  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_007512  Plut_0156  carbamoyl phosphate synthase small subunit  51.19 
 
 
369 aa  363  3e-99  Chlorobium luteolum DSM 273  Bacteria  normal  0.983052  normal  0.416855 
 
 
-
 
NC_014248  Aazo_2282  carbamoyl-phosphate synthase small subunit  51.51 
 
 
385 aa  362  4e-99  'Nostoc azollae' 0708  Bacteria  normal  0.332421  n/a   
 
 
-
 
NC_010730  SYO3AOP1_1361  carbamoyl phosphate synthase small subunit  48.26 
 
 
376 aa  362  4e-99  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3359  carbamoyl-phosphate synthase, small subunit  52.28 
 
 
386 aa  363  4e-99  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.663891  normal 
 
 
-
 
NC_007413  Ava_4410  carbamoyl phosphate synthase small subunit  50.4 
 
 
388 aa  361  1e-98  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.924948 
 
 
-
 
NC_013216  Dtox_2353  carbamoyl-phosphate synthase, small subunit  48.23 
 
 
358 aa  361  1e-98  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.00528586  normal 
 
 
-
 
NC_007644  Moth_0881  carbamoyl-phosphate synthase small subunit  48.94 
 
 
361 aa  360  2e-98  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2643  carbamoyl-phosphate synthase, small subunit  51.21 
 
 
374 aa  360  3e-98  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_4242  carbamoyl-phosphate synthase, small subunit  49.06 
 
 
376 aa  356  5e-97  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_2898  carbamoyl phosphate synthase small subunit  48.49 
 
 
349 aa  355  1e-96  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_010803  Clim_2299  carbamoyl phosphate synthase small subunit  50.13 
 
 
369 aa  354  1e-96  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.0000401664  n/a   
 
 
-
 
NC_007604  Synpcc7942_2122  carbamoyl phosphate synthase small subunit  51.21 
 
 
391 aa  354  2e-96  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.618886 
 
 
-
 
NC_008312  Tery_2310  carbamoyl phosphate synthase small subunit  48.16 
 
 
384 aa  353  2.9999999999999997e-96  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.162276 
 
 
-
 
NC_011899  Hore_02880  carbamoyl-phosphate synthase, small subunit  48.64 
 
 
364 aa  353  4e-96  Halothermothrix orenii H 168  Bacteria  normal  0.422195  n/a   
 
 
-
 
NC_013161  Cyan8802_0390  carbamoyl phosphate synthase small subunit  49.6 
 
 
380 aa  352  5e-96  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_0381  carbamoyl phosphate synthase small subunit  49.6 
 
 
380 aa  352  5e-96  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008262  CPR_2577  carbamoyl phosphate synthase small subunit  48.22 
 
 
349 aa  352  8.999999999999999e-96  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_0873  carbamoyl phosphate synthase small subunit  49.47 
 
 
384 aa  350  2e-95  Burkholderia phymatum STM815  Bacteria  normal  0.644445  normal  0.264285 
 
 
-
 
NC_011059  Paes_2113  carbamoyl phosphate synthase small subunit  48.01 
 
 
371 aa  348  7e-95  Prosthecochloris aestuarii DSM 271  Bacteria  unclonable  0.000000000982338  normal  0.988223 
 
 
-
 
NC_008576  Mmc1_3019  carbamoyl-phosphate synthase small subunit  48.4 
 
 
377 aa  348  7e-95  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_3203  carbamoyl-phosphate synthase, small subunit  49.07 
 
 
368 aa  348  1e-94  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A4432  carbamoyl phosphate synthase small subunit  48.66 
 
 
380 aa  347  2e-94  Burkholderia sp. 383  Bacteria  hitchhiker  0.00120805  normal 
 
 
-
 
NC_011898  Ccel_2913  carbamoyl-phosphate synthase, small subunit  47.15 
 
 
351 aa  347  2e-94  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_2459  carbamoyl phosphate synthase small subunit  47.75 
 
 
369 aa  347  2e-94  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.420642  n/a   
 
 
-
 
NC_009379  Pnuc_1019  carbamoyl-phosphate synthase, small subunit  47.8 
 
 
397 aa  346  3e-94  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_010531  Pnec_0848  carbamoyl-phosphate synthase, small subunit  47.56 
 
 
398 aa  346  3e-94  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal  0.287672 
 
 
-
 
NC_010831  Cphamn1_2349  carbamoyl phosphate synthase small subunit  48.93 
 
 
366 aa  345  5e-94  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_011060  Ppha_0218  carbamoyl phosphate synthase small subunit  49.47 
 
 
367 aa  345  5e-94  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_2679  carbamoyl phosphate synthase small subunit  47.51 
 
 
401 aa  344  2e-93  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_1261  carbamoyl phosphate synthase small subunit  48.39 
 
 
380 aa  343  2e-93  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0131767  normal  0.191599 
 
 
-
 
NC_008025  Dgeo_2060  carbamoyl phosphate synthase small subunit  49.34 
 
 
394 aa  343  2.9999999999999997e-93  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.745912 
 
 
-
 
NC_008060  Bcen_0809  carbamoyl phosphate synthase small subunit  48.39 
 
 
380 aa  343  2.9999999999999997e-93  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_1290  carbamoyl phosphate synthase small subunit  48.39 
 
 
380 aa  343  2.9999999999999997e-93  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0948613  n/a   
 
 
-
 
NC_007651  BTH_I2783  carbamoyl phosphate synthase small subunit  48.66 
 
 
381 aa  343  4e-93  Burkholderia thailandensis E264  Bacteria  normal  0.259596  n/a   
 
 
-
 
NC_009012  Cthe_0950  carbamoyl-phosphate synthase small subunit  47.52 
 
 
357 aa  342  7e-93  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A0587  carbamoyl phosphate synthase small subunit  48.4 
 
 
381 aa  342  8e-93  Burkholderia mallei NCTC 10229  Bacteria  normal  0.368687  n/a   
 
 
-
 
NC_006348  BMA0770  carbamoyl phosphate synthase small subunit  48.4 
 
 
381 aa  342  8e-93  Burkholderia mallei ATCC 23344  Bacteria  normal  0.76287  n/a   
 
 
-
 
NC_009080  BMA10247_0564  carbamoyl phosphate synthase small subunit  48.4 
 
 
381 aa  342  8e-93  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1281  carbamoyl phosphate synthase small subunit  48.4 
 
 
381 aa  342  8e-93  Burkholderia mallei SAVP1  Bacteria  normal  0.697849  n/a   
 
 
-
 
NC_008781  Pnap_1774  carbamoyl phosphate synthase small subunit  46.46 
 
 
393 aa  342  9e-93  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.0283036 
 
 
-
 
NC_011901  Tgr7_0975  carbamoyl-phosphate synthase, small subunit  49.87 
 
 
379 aa  341  1e-92  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0938  carbamoyl-phosphate synthase small subunit  48.04 
 
 
385 aa  341  1e-92  Dechloromonas aromatica RCB  Bacteria  normal  0.742428  normal 
 
 
-
 
NC_007434  BURPS1710b_1608  carbamoyl phosphate synthase small subunit  48.4 
 
 
381 aa  341  1e-92  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc1519  carbamoyl phosphate synthase small subunit  48.53 
 
 
378 aa  340  2e-92  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_009074  BURPS668_1475  carbamoyl phosphate synthase small subunit  48.13 
 
 
381 aa  340  2e-92  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2703  carbamoyl-phosphate synthase small subunit  48 
 
 
388 aa  340  2.9999999999999998e-92  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.614253 
 
 
-
 
NC_009076  BURPS1106A_1505  carbamoyl phosphate synthase small subunit  48.13 
 
 
381 aa  340  2.9999999999999998e-92  Burkholderia pseudomallei 1106a  Bacteria  normal  0.188244  n/a   
 
 
-
 
NC_013411  GYMC61_1916  carbamoyl phosphate synthase small subunit  46.93 
 
 
364 aa  340  2.9999999999999998e-92  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011729  PCC7424_3196  carbamoyl phosphate synthase small subunit  49.33 
 
 
379 aa  339  4e-92  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0368063 
 
 
-
 
NC_010551  BamMC406_1179  carbamoyl phosphate synthase small subunit  48.39 
 
 
381 aa  338  7e-92  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.381236 
 
 
-
 
NC_008390  Bamb_1167  carbamoyl phosphate synthase small subunit  48.39 
 
 
380 aa  338  7e-92  Burkholderia ambifaria AMMD  Bacteria  normal  0.278191  n/a   
 
 
-
 
NC_010717  PXO_00088  carbamoyl phosphate synthase small subunit  48.25 
 
 
390 aa  338  9.999999999999999e-92  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.562291  n/a   
 
 
-
 
NC_010084  Bmul_2030  carbamoyl phosphate synthase small subunit  48.4 
 
 
380 aa  338  9.999999999999999e-92  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.115427  normal 
 
 
-
 
NC_007516  Syncc9605_1152  carbamoyl phosphate synthase small subunit  48.29 
 
 
386 aa  337  9.999999999999999e-92  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_1811  carbamoyl phosphate synthase small subunit  48.53 
 
 
393 aa  338  9.999999999999999e-92  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.0542874 
 
 
-
 
NC_010681  Bphyt_2868  carbamoyl phosphate synthase small subunit  48.52 
 
 
384 aa  337  1.9999999999999998e-91  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.00228162  normal 
 
 
-
 
NC_012856  Rpic12D_1728  carbamoyl phosphate synthase small subunit  49.32 
 
 
378 aa  337  1.9999999999999998e-91  Ralstonia pickettii 12D  Bacteria  normal  0.590257  normal  0.961099 
 
 
-
 
NC_014212  Mesil_2356  carbamoyl-phosphate synthase, small subunit  46.49 
 
 
388 aa  336  5e-91  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_2036  carbamoyl phosphate synthase small subunit  49.04 
 
 
378 aa  335  9e-91  Ralstonia pickettii 12J  Bacteria  normal  0.534876  normal 
 
 
-
 
NC_011898  Ccel_0615  carbamoyl-phosphate synthase, small subunit  47.44 
 
 
360 aa  334  1e-90  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A1256  carbamoyl phosphate synthase small subunit  48.51 
 
 
391 aa  334  1e-90  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_4932  carbamoyl-phosphate synthase, small subunit  47.89 
 
 
388 aa  333  2e-90  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.259128 
 
 
-
 
NC_010524  Lcho_2823  carbamoyl-phosphate synthase, small subunit  47.12 
 
 
394 aa  333  2e-90  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007514  Cag_0107  carbamoyl phosphate synthase small subunit  47.47 
 
 
367 aa  333  3e-90  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_984  carbamoyl-phosphate synthase, small subunit  44.74 
 
 
364 aa  330  3e-89  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_008820  P9303_15771  carbamoyl phosphate synthase small subunit  48.26 
 
 
379 aa  330  3e-89  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_010571  Oter_1915  carbamoyl-phosphate synthase, small subunit  45.62 
 
 
390 aa  329  5.0000000000000004e-89  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_1307  carbamoyl-phosphate synthase, small subunit  47.3 
 
 
368 aa  329  5.0000000000000004e-89  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A2177  carbamoyl phosphate synthase small subunit  47.59 
 
 
378 aa  329  6e-89  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
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