Gene Rmar_2002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2002 
Symbol 
ID8568659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2335013 
End bp2336152 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content65% 
IMG OID 
Productcarbamoyl-phosphate synthase, small subunit 
Protein accessionYP_003291271 
Protein GI268317552 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACCCC TGCTGCACCC GACACCGGAT CCCTGTAAGC TGGCACTGGC CGATGGAACC 
GTCGTAACCG GCATCGCCAT CGGGCACCGA GGCGAGACGG GCGGGGAGCT GTGCTTCAAC
ACCAGCATGA CGGGCTACCA GGAAATCATG ACTGACCCGT CCTACTACGG GCAGATCATG
ATGATGACCT ACCCCCACAT CGGCAACTAC GGGGTGATGG ACATCGACAT GGAAGCCGCC
CGTCCGATGG TGGCCGGCCT GGTGGTGCGT GCCTTTTCGC ATCGCTACTC GAACCGCCTG
GCCGACGGCT CGCTGGAAGA CTGGATGCGA CGCTACGAAC TGGTAGGCAT CTCCGGTGTC
GATACGCGAC GATTGGTGCG GCACATTCGT ACGAAAGGGG TCATGAACGC GGTCATCTCG
TCGATCGATC TTGACGACGA GAGCCTGGTC GAAAAGGCGC GGCGCCTGCC CTCAATGGCC
GGGCTGGAGC TGGCCTCCTA CGTGATGCCG GAGCGGCCCT ACGACTTCTG CACCGGACCC
GGGCCGCGCA TCGCCGTCTT CGACTATGGC TGCAAGCTGA ACATCCTGCG CATGTTCCAG
GCGCGGGACT GCACGGTGCG CGTCTTTCCG GGCTATACGC CGCTCAATGA AGTGCTGGCC
TGGGAGCCCG ACGGGCTGTT CTTCTCGAAC GGGCCGGGCG ATCCACGGGC CATGCCGCAG
GCCATCGAGC AGGTGCGGGC GGCCATTCGT ACCGGGTTGC CCATCTTCGG CATCTGCCTG
GGACACCAGC TCATGGCGCT GGCGCTGGGC TTCAAGGTCT ACAAGATGTA CGTCGGGCAC
CGCGGTGCCA ACCACCCGGT CAAGAACCTG CGCACCGGCC GCGTGGAAGT GACCACGCAG
AACCACGGCT TTGCCGTCGA GGCCGAGTCG GTCGATCCGC GCGAGGCCGA GGTGTCGCAC
ATCAACCTGA ACGACCGGAC CGTCGAGGGG CTGCGCTTCA AGTCGTTCGC CGGGCTTTCG
GTGCAGTACC ATCCGGAAGC GTCGCCCGGA CCCCACGACA GCCGCTACCT CTTCGACGAG
TTCCTGGCAC TGGTGGCGGC GCACCGTCCG GTCGCGACAC CCCAGTTGAC CCGCGTGTGA
 
Protein sequence
MIPLLHPTPD PCKLALADGT VVTGIAIGHR GETGGELCFN TSMTGYQEIM TDPSYYGQIM 
MMTYPHIGNY GVMDIDMEAA RPMVAGLVVR AFSHRYSNRL ADGSLEDWMR RYELVGISGV
DTRRLVRHIR TKGVMNAVIS SIDLDDESLV EKARRLPSMA GLELASYVMP ERPYDFCTGP
GPRIAVFDYG CKLNILRMFQ ARDCTVRVFP GYTPLNEVLA WEPDGLFFSN GPGDPRAMPQ
AIEQVRAAIR TGLPIFGICL GHQLMALALG FKVYKMYVGH RGANHPVKNL RTGRVEVTTQ
NHGFAVEAES VDPREAEVSH INLNDRTVEG LRFKSFAGLS VQYHPEASPG PHDSRYLFDE
FLALVAAHRP VATPQLTRV