Gene MCA1853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA1853 
SymbolcarA 
ID3105027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp1989888 
End bp1991024 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content65% 
IMG OID637171012 
Productcarbamoyl phosphate synthase small subunit 
Protein accessionYP_114290 
Protein GI53803858 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0505] Carbamoylphosphate synthase small subunit 
TIGRFAM ID[TIGR01368] carbamoyl-phosphate synthase, small subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0936768 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAACTC CCGCGCTGCT CGCTCTTGAC GACGGTACCG TGTTTCGTGG CTACGCGATC 
GGGGCCGAGG GGGCATCGGT GGGCGAGGTG GTGTTCAATA CCTCGATCAC CGGCTACCAG
GAAATCCTCA CCGATCCGTC CTACGCGCGG CAGATCGTCG CGCTGACCTA TCCCCACATC
GGCAACACCG GCATCAACGA AGAAGACACC GAATCTACCG GCATTTTCGC CAGCGGATTG
GTGATCCGTG ATCTGCCGCT GCGGGCCAGC AACTGGCGGT GCGAGCGCCG GCTCGACGAA
TACCTGCGCC AGCGCGGCGT GGTCGGCATT GCCGGCCTGG ATACCCGCCG GCTGACCCGT
ATCCTGCGCG ACAAGGGGGC CCAGCGCGGT TGCATCGCAG CCGGCAACGG CCTGGATGCC
GACGCTGCGG TGGCGATGGC CCGGGGTTTT CCCGGATTGC AGGGTATGGA TCTGGCTCAG
GTCGTCACCA CCCCGCAGCG CTATGAGTGG ACCGAAGGCA GCTGGCGGTT CGGCGCCGAG
CCGGTACAGT CAGGTCAAGG CGGTTTCCAT GTCGTCGCGT ACGATTTCGG AGTCAAGCGA
AACATCCTGC GACTGCTCGC GGATCGAGGC TGCCGGGTCA CCGTGGTACC CGCCCGGACG
CCGGCAGCGG AAGCGTTGGC GCTCAAACCC GACGGCTTGT TCCTATCGAA CGGTCCTGGT
GATCCGGAGC CTTGCGACTA CGCCGTTGCG GCGATCCGGG AATTCCTGGA CACCGGCATT
CCGGTTTTCG GCATCTGCCT GGGGCATCAG TTGCTGGCCC TCGCGGCGGG CGCGCGCACG
TCGAAGATGA AGTTCGGCCA TCACGGCGCC AACCATCCGG TGCAGGACCT GAGCACCGGC
CGGGTCGTGA TCACCAGCCA GAACCACGGT TTCGCCGTGG AGGAGGCCAG CCTGCCGGCG
AACGTGAGAC CGACCCACCG CTCGCTGTTC GACGGCAGTC TGCAGGGCAT CGAATTCACC
GATCGTTCTG CCTTCAGTTT CCAAGGGCAT CCGGAAGCCA GTCCTGGCCC GCACGATCTG
TGCGACCTGT TCGACCGCTT CGTCGGCGCC ATGAGAGCCG CCCGCAACCG CCATTAA
 
Protein sequence
MKTPALLALD DGTVFRGYAI GAEGASVGEV VFNTSITGYQ EILTDPSYAR QIVALTYPHI 
GNTGINEEDT ESTGIFASGL VIRDLPLRAS NWRCERRLDE YLRQRGVVGI AGLDTRRLTR
ILRDKGAQRG CIAAGNGLDA DAAVAMARGF PGLQGMDLAQ VVTTPQRYEW TEGSWRFGAE
PVQSGQGGFH VVAYDFGVKR NILRLLADRG CRVTVVPART PAAEALALKP DGLFLSNGPG
DPEPCDYAVA AIREFLDTGI PVFGICLGHQ LLALAAGART SKMKFGHHGA NHPVQDLSTG
RVVITSQNHG FAVEEASLPA NVRPTHRSLF DGSLQGIEFT DRSAFSFQGH PEASPGPHDL
CDLFDRFVGA MRAARNRH