Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0878 |
Symbol | |
ID | 3760438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 956453 |
End bp | 957589 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637785598 |
Product | carbamoyl-phosphate synthase, small subunit |
Protein accession | YP_391148 |
Protein GI | 78485223 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACACA CAGCTTTATT AGCTTTAGAA GACGGGACCC TTTTTTGGGG TATTTCTCTA GGAGCAGAAG GTGAAACCGT AGGGGAAGTG GTTTTTAATA CTTCTTTAAC GGGTTACCAA GAAATTCTGA CAGATCCTTC TTATTACAAA CAGATTGTAA CTTTGACTTA CCCGCATATT GGGAATGTTG GGGTAAACGA AGAAGATGAA GAATCGCCTT CTATTATGGC GCAAGGCCTA ATCGTTCGAG ATTGTCCTCC ATTAATGAGT AACTTTCGTG CTCAAAAGTC ATTGCCGGAC TATTTAAAAG AGCAAGGCGT TGTAGCCATT TCTGATATTG ATACGCGTAA GCTAACGCGA ATTCTTCGTG ATAAAGGTGC TCAGTCAGGC GTGATTGTGG CAGGTGAGAA TATTGATGCC GATGCGGCCA TCGCCAAGGC GAAAACGTTT GCCGGTCTGA AAGGGATGGA TTTAGCGAAA GAAGTCACAA CGTCTGAAAC TTATGTTTGG ACCGAGGGTA CTTGGTCGTT GGAAAACGGT CATACCGATT GCGCGTCCAA GTCGGAATAT CACGTGGTGG CATTTGATTA TGGTATCAAG CGTAACATTC TACGAATGTT AGCGGACCGA GGTTGTAAAT TGACAGTGGT TCCGGCTAAG ACCCCAGCTT CTGAAGTGCT GGCGATGAAG CCGGACGGGA TTTTCCTGTC AAATGGTCCG GGAGATCCAG AGCCTTGTGA TTATGCGATT CAAGCCATTC AAGAAGTCTT AAGAACCGAT ATTCCGGTGT TTGGAATTTG TTTAGGACAT CAATTGTTGG CGCTCGCTTC GGGTGCGAAA ACGGTCAAAA TGAAATTTGG TCATCACGGT GGTAACCATC CTGTTCAGGA CTTAAAAACT AAAAAAGTCA TGATCACTGC GCAAAACCAT GGTTTTGCAG TGGATGCCGA TTCCTTGCCC GACTGCCTAG AGGCCACGCA CAGCTCACTG TTTGATGGTT CATCACAAGG TATACAACAC AAAGACAAAG CGGCATTTAG TTTCCAAGGT CACCCAGAAG CCAGTCCGGG TCCACATGAT GTGGCGCCTT TATTTGACCA ATTTATTGAA AACATTAAAA AATATAAACA AGCATAA
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Protein sequence | MTHTALLALE DGTLFWGISL GAEGETVGEV VFNTSLTGYQ EILTDPSYYK QIVTLTYPHI GNVGVNEEDE ESPSIMAQGL IVRDCPPLMS NFRAQKSLPD YLKEQGVVAI SDIDTRKLTR ILRDKGAQSG VIVAGENIDA DAAIAKAKTF AGLKGMDLAK EVTTSETYVW TEGTWSLENG HTDCASKSEY HVVAFDYGIK RNILRMLADR GCKLTVVPAK TPASEVLAMK PDGIFLSNGP GDPEPCDYAI QAIQEVLRTD IPVFGICLGH QLLALASGAK TVKMKFGHHG GNHPVQDLKT KKVMITAQNH GFAVDADSLP DCLEATHSSL FDGSSQGIQH KDKAAFSFQG HPEASPGPHD VAPLFDQFIE NIKKYKQA
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