Gene Tcr_0878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0878 
Symbol 
ID3760438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp956453 
End bp957589 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content45% 
IMG OID637785598 
Productcarbamoyl-phosphate synthase, small subunit 
Protein accessionYP_391148 
Protein GI78485223 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0505] Carbamoylphosphate synthase small subunit 
TIGRFAM ID[TIGR01368] carbamoyl-phosphate synthase, small subunit 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACACA CAGCTTTATT AGCTTTAGAA GACGGGACCC TTTTTTGGGG TATTTCTCTA 
GGAGCAGAAG GTGAAACCGT AGGGGAAGTG GTTTTTAATA CTTCTTTAAC GGGTTACCAA
GAAATTCTGA CAGATCCTTC TTATTACAAA CAGATTGTAA CTTTGACTTA CCCGCATATT
GGGAATGTTG GGGTAAACGA AGAAGATGAA GAATCGCCTT CTATTATGGC GCAAGGCCTA
ATCGTTCGAG ATTGTCCTCC ATTAATGAGT AACTTTCGTG CTCAAAAGTC ATTGCCGGAC
TATTTAAAAG AGCAAGGCGT TGTAGCCATT TCTGATATTG ATACGCGTAA GCTAACGCGA
ATTCTTCGTG ATAAAGGTGC TCAGTCAGGC GTGATTGTGG CAGGTGAGAA TATTGATGCC
GATGCGGCCA TCGCCAAGGC GAAAACGTTT GCCGGTCTGA AAGGGATGGA TTTAGCGAAA
GAAGTCACAA CGTCTGAAAC TTATGTTTGG ACCGAGGGTA CTTGGTCGTT GGAAAACGGT
CATACCGATT GCGCGTCCAA GTCGGAATAT CACGTGGTGG CATTTGATTA TGGTATCAAG
CGTAACATTC TACGAATGTT AGCGGACCGA GGTTGTAAAT TGACAGTGGT TCCGGCTAAG
ACCCCAGCTT CTGAAGTGCT GGCGATGAAG CCGGACGGGA TTTTCCTGTC AAATGGTCCG
GGAGATCCAG AGCCTTGTGA TTATGCGATT CAAGCCATTC AAGAAGTCTT AAGAACCGAT
ATTCCGGTGT TTGGAATTTG TTTAGGACAT CAATTGTTGG CGCTCGCTTC GGGTGCGAAA
ACGGTCAAAA TGAAATTTGG TCATCACGGT GGTAACCATC CTGTTCAGGA CTTAAAAACT
AAAAAAGTCA TGATCACTGC GCAAAACCAT GGTTTTGCAG TGGATGCCGA TTCCTTGCCC
GACTGCCTAG AGGCCACGCA CAGCTCACTG TTTGATGGTT CATCACAAGG TATACAACAC
AAAGACAAAG CGGCATTTAG TTTCCAAGGT CACCCAGAAG CCAGTCCGGG TCCACATGAT
GTGGCGCCTT TATTTGACCA ATTTATTGAA AACATTAAAA AATATAAACA AGCATAA
 
Protein sequence
MTHTALLALE DGTLFWGISL GAEGETVGEV VFNTSLTGYQ EILTDPSYYK QIVTLTYPHI 
GNVGVNEEDE ESPSIMAQGL IVRDCPPLMS NFRAQKSLPD YLKEQGVVAI SDIDTRKLTR
ILRDKGAQSG VIVAGENIDA DAAIAKAKTF AGLKGMDLAK EVTTSETYVW TEGTWSLENG
HTDCASKSEY HVVAFDYGIK RNILRMLADR GCKLTVVPAK TPASEVLAMK PDGIFLSNGP
GDPEPCDYAI QAIQEVLRTD IPVFGICLGH QLLALASGAK TVKMKFGHHG GNHPVQDLKT
KKVMITAQNH GFAVDADSLP DCLEATHSSL FDGSSQGIQH KDKAAFSFQG HPEASPGPHD
VAPLFDQFIE NIKKYKQA