| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2215 |
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| Symbol | |
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| ID | 4172367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2675611 |
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| End bp | 2676756 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638055223 |
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| Product | carbamoyl-phosphate synthase, small subunit |
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| Protein accession | YP_661787 |
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| Protein GI | 109898532 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000311671 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGGCTAATT CCGCCCTTTT AGTGCTAGAA GATGGGTCTG TTTTCAATGG CACGGCTATC
GGAGCGACTG GTATGTCTGT TGGTGAAGTG GTGTTTAACA CCTCAATGAC AGGTTATCAG
GAAATTCTTA CTGATCCCTC TTACGCAGAA CAAATCGTAA CTTTAACCTA TCCCCATATT
GGTAACACCG GTACCAATAG CGAAGATTGT GAATCAACAA AAGTGTGGGC CAAAGGCCTT
ATCATTAGAG ATTTACCGCT GCTAGCGAGT AATTTTCGTA GTGAACAATC GTTGTCTGAA
TACCTTCGTG TAAATAATAT TCTTGGTATC GCAGATATCG ACACTCGCCG TTTAACGCGT
ATTTTGCGTG ATAAAGGCGC GCAAAATGGC TGCATCATCG CAGTCGATTC AAGCTCTGAG
ATTACGCTTG ATAAAGAATT GGCCCTTGAG AAGGCGAAAG CGTTCTCTGG TTTGAAAGGT
TTGGATCTTG CCAAAGAAGT CACCACTGAC GAAGTCTACA GTTGGACCGA CGGTTCATGG
ACGCTTGGCC AAGGCTTCAA CGAAAAGCAA ACTGATTTGC CGTTTCACGT CGTAGCCTAC
GATTTTGGTG CCAAACACAA CATTTTACGT ATGTTAGTAG ACAGAGGCTG CCGATTAACG
GTGGTACCTG CTAAAACCAC AGCAGAAGAT GTACTGGCGT TAAACCCAGA TGGCGTGTTT
TTATCCAACG GCCCTGGTGA TCCTGAGCCT TGCGTTTACG CGATCGAAGC GATTAAGACC
TTGCTCGATA AAAACCTGCC TATTTTTGGT ATCTGTTTAG GGCATCAATT ATTGGCACTA
GCCAGTGGTG CAAAAACTGT AAAAATGAAA TTCGGTCATC ACGGTGCTAA CCACCCAGTG
AAAGACATAC TTGGTCAGCG CGTCATGATC ACCAGCCAAA ACCACGGTTT CGCTGTTGAT
GAACAATCGA TGCCTGACAA TTTAGATGTT ACCCATGTGT CATTGTTTGA CCAGTCATTA
CAAGGTATAC ACCGTAATGA TAAGCCCGCG TTTAGCTTCC AGGGACACCC TGAAGCGAGC
CCCGGCCCTC ATGACGCGGC ACCTTTGTTT GATCACTTCA TTAAATTGAT GCAAGCAACA
CGCTAA
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| Protein sequence | MANSALLVLE DGSVFNGTAI GATGMSVGEV VFNTSMTGYQ EILTDPSYAE QIVTLTYPHI
GNTGTNSEDC ESTKVWAKGL IIRDLPLLAS NFRSEQSLSE YLRVNNILGI ADIDTRRLTR
ILRDKGAQNG CIIAVDSSSE ITLDKELALE KAKAFSGLKG LDLAKEVTTD EVYSWTDGSW
TLGQGFNEKQ TDLPFHVVAY DFGAKHNILR MLVDRGCRLT VVPAKTTAED VLALNPDGVF
LSNGPGDPEP CVYAIEAIKT LLDKNLPIFG ICLGHQLLAL ASGAKTVKMK FGHHGANHPV
KDILGQRVMI TSQNHGFAVD EQSMPDNLDV THVSLFDQSL QGIHRNDKPA FSFQGHPEAS
PGPHDAAPLF DHFIKLMQAT R
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