More than 300 homologs were found in PanDaTox collection
for query gene Dole_0120 on replicon NC_009943
Organism: Desulfococcus oleovorans Hxd3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009943  Dole_0120  carbamoyl-phosphate synthase, small subunit  100 
 
 
380 aa  788    Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0268  carbamoyl phosphate synthase small subunit  58.89 
 
 
375 aa  438  9.999999999999999e-123  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.583908 
 
 
-
 
NC_002939  GSU1273  carbamoyl phosphate synthase small subunit  56.92 
 
 
374 aa  437  1e-121  Geobacter sulfurreducens PCA  Bacteria  normal  0.0567002  n/a   
 
 
-
 
NC_011146  Gbem_1898  carbamoyl phosphate synthase small subunit  57.48 
 
 
374 aa  436  1e-121  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1613  carbamoyl phosphate synthase small subunit  58.31 
 
 
376 aa  436  1e-121  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0266912  n/a   
 
 
-
 
NC_007517  Gmet_1771  carbamoyl phosphate synthase small subunit  56.59 
 
 
374 aa  436  1e-121  Geobacter metallireducens GS-15  Bacteria  normal  0.0224697  normal  0.089739 
 
 
-
 
NC_012918  GM21_2310  carbamoyl phosphate synthase small subunit  57.74 
 
 
374 aa  437  1e-121  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008554  Sfum_0009  carbamoyl phosphate synthase small subunit  56.68 
 
 
391 aa  432  1e-120  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.35972  normal 
 
 
-
 
NC_008609  Ppro_2527  carbamoyl phosphate synthase small subunit  58.2 
 
 
373 aa  433  1e-120  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_3646  carbamoyl phosphate synthase small subunit  57.14 
 
 
375 aa  430  1e-119  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0133  carbamoyl-phosphate synthase, small subunit  56.73 
 
 
378 aa  429  1e-119  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1858  carbamoyl phosphate synthase small subunit  55.59 
 
 
373 aa  427  1e-118  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2083  carbamoyl phosphate synthase small subunit  57.82 
 
 
373 aa  423  1e-117  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_1071  carbamoyl-phosphate synthase, small subunit  54.93 
 
 
369 aa  422  1e-117  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0749952  normal  0.228018 
 
 
-
 
NC_011769  DvMF_2370  carbamoyl phosphate synthase small subunit  56.5 
 
 
376 aa  417  9.999999999999999e-116  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.82733 
 
 
-
 
NC_010655  Amuc_1250  carbamoyl-phosphate synthase, small subunit  55.29 
 
 
372 aa  407  1.0000000000000001e-112  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_014148  Plim_2032  carbamoyl-phosphate synthase, small subunit  54.4 
 
 
383 aa  404  1e-111  Planctomyces limnophilus DSM 3776  Bacteria  unclonable  0.000000277554  n/a   
 
 
-
 
NC_007760  Adeh_1620  carbamoyl phosphate synthase small subunit  54.23 
 
 
373 aa  399  9.999999999999999e-111  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.394714  n/a   
 
 
-
 
NC_011883  Ddes_1097  carbamoyl phosphate synthase small subunit  54.67 
 
 
376 aa  399  9.999999999999999e-111  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.643284  n/a   
 
 
-
 
NC_011831  Cagg_2643  carbamoyl-phosphate synthase, small subunit  55.05 
 
 
374 aa  396  1e-109  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_2191  carbamoyl phosphate synthase small subunit  53.05 
 
 
372 aa  393  1e-108  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.352304 
 
 
-
 
NC_011145  AnaeK_2240  carbamoyl phosphate synthase small subunit  53.44 
 
 
373 aa  394  1e-108  Anaeromyxobacter sp. K  Bacteria  normal  0.513182  n/a   
 
 
-
 
NC_008312  Tery_2310  carbamoyl phosphate synthase small subunit  54.23 
 
 
384 aa  392  1e-108  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.162276 
 
 
-
 
NC_011891  A2cp1_2328  carbamoyl phosphate synthase small subunit  53.44 
 
 
373 aa  394  1e-108  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3359  carbamoyl-phosphate synthase, small subunit  54.4 
 
 
386 aa  390  1e-107  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.663891  normal 
 
 
-
 
NC_008009  Acid345_2194  carbamoyl-phosphate synthase small subunit  51.72 
 
 
373 aa  389  1e-107  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_007512  Plut_0156  carbamoyl phosphate synthase small subunit  51.97 
 
 
369 aa  387  1e-106  Chlorobium luteolum DSM 273  Bacteria  normal  0.983052  normal  0.416855 
 
 
-
 
NC_009523  RoseRS_4055  carbamoyl-phosphate synthase, small subunit  53.46 
 
 
386 aa  387  1e-106  Roseiflexus sp. RS-1  Bacteria  normal  0.103191  normal 
 
 
-
 
NC_011884  Cyan7425_1942  carbamoyl phosphate synthase small subunit  53.51 
 
 
389 aa  386  1e-106  Cyanothece sp. PCC 7425  Bacteria  normal  0.230816  normal  0.202912 
 
 
-
 
NC_008639  Cpha266_2459  carbamoyl phosphate synthase small subunit  50.66 
 
 
369 aa  385  1e-106  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.420642  n/a   
 
 
-
 
NC_013385  Adeg_0372  carbamoyl-phosphate synthase, small subunit  51.72 
 
 
359 aa  380  1e-104  Ammonifex degensii KC4  Bacteria  normal  0.386907  n/a   
 
 
-
 
NC_009253  Dred_1683  carbamoyl-phosphate synthase, small subunit  52.37 
 
 
359 aa  381  1e-104  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000104913  n/a   
 
 
-
 
NC_009972  Haur_4242  carbamoyl-phosphate synthase, small subunit  50.27 
 
 
376 aa  379  1e-104  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_2353  carbamoyl-phosphate synthase, small subunit  50.4 
 
 
358 aa  375  1e-103  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.00528586  normal 
 
 
-
 
NC_010803  Clim_2299  carbamoyl phosphate synthase small subunit  50.92 
 
 
369 aa  377  1e-103  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.0000401664  n/a   
 
 
-
 
NC_010424  Daud_1303  carbamoyl-phosphate synthase, small subunit  50.13 
 
 
359 aa  377  1e-103  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0780078  n/a   
 
 
-
 
NC_010831  Cphamn1_2349  carbamoyl phosphate synthase small subunit  51.18 
 
 
366 aa  375  1e-103  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_011060  Ppha_0218  carbamoyl phosphate synthase small subunit  49.48 
 
 
367 aa  375  1e-103  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_0950  carbamoyl-phosphate synthase small subunit  50.66 
 
 
357 aa  373  1e-102  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_0881  carbamoyl-phosphate synthase small subunit  50.66 
 
 
361 aa  374  1e-102  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_2679  carbamoyl phosphate synthase small subunit  51.16 
 
 
401 aa  373  1e-102  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_013161  Cyan8802_0390  carbamoyl phosphate synthase small subunit  51.85 
 
 
380 aa  374  1e-102  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_0381  carbamoyl phosphate synthase small subunit  51.85 
 
 
380 aa  374  1e-102  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011059  Paes_2113  carbamoyl phosphate synthase small subunit  48.56 
 
 
371 aa  369  1e-101  Prosthecochloris aestuarii DSM 271  Bacteria  unclonable  0.000000000982338  normal  0.988223 
 
 
-
 
NC_007510  Bcep18194_A4432  carbamoyl phosphate synthase small subunit  50.65 
 
 
380 aa  368  1e-101  Burkholderia sp. 383  Bacteria  hitchhiker  0.00120805  normal 
 
 
-
 
NC_010622  Bphy_0873  carbamoyl phosphate synthase small subunit  51.43 
 
 
384 aa  369  1e-101  Burkholderia phymatum STM815  Bacteria  normal  0.644445  normal  0.264285 
 
 
-
 
NC_007651  BTH_I2783  carbamoyl phosphate synthase small subunit  50.9 
 
 
381 aa  369  1e-101  Burkholderia thailandensis E264  Bacteria  normal  0.259596  n/a   
 
 
-
 
NC_009379  Pnuc_1019  carbamoyl-phosphate synthase, small subunit  51.67 
 
 
397 aa  369  1e-101  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_1505  carbamoyl phosphate synthase small subunit  50.65 
 
 
381 aa  365  1e-100  Burkholderia pseudomallei 1106a  Bacteria  normal  0.188244  n/a   
 
 
-
 
NC_011729  PCC7424_3196  carbamoyl phosphate synthase small subunit  51.19 
 
 
379 aa  367  1e-100  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0368063 
 
 
-
 
NC_006348  BMA0770  carbamoyl phosphate synthase small subunit  50.65 
 
 
381 aa  365  1e-100  Burkholderia mallei ATCC 23344  Bacteria  normal  0.76287  n/a   
 
 
-
 
NC_009080  BMA10247_0564  carbamoyl phosphate synthase small subunit  50.65 
 
 
381 aa  365  1e-100  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_4410  carbamoyl phosphate synthase small subunit  51.34 
 
 
388 aa  367  1e-100  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.924948 
 
 
-
 
NC_007434  BURPS1710b_1608  carbamoyl phosphate synthase small subunit  50.65 
 
 
381 aa  365  1e-100  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_1475  carbamoyl phosphate synthase small subunit  50.65 
 
 
381 aa  365  1e-100  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_0107  carbamoyl phosphate synthase small subunit  49.35 
 
 
367 aa  367  1e-100  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0362  carbamoyl phosphate synthase small subunit  48.66 
 
 
392 aa  367  1e-100  Thermotoga petrophila RKU-1  Bacteria  normal  0.0108123  n/a   
 
 
-
 
NC_008836  BMA10229_A0587  carbamoyl phosphate synthase small subunit  50.65 
 
 
381 aa  365  1e-100  Burkholderia mallei NCTC 10229  Bacteria  normal  0.368687  n/a   
 
 
-
 
NC_008025  Dgeo_2060  carbamoyl phosphate synthase small subunit  49.74 
 
 
394 aa  365  1e-100  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.745912 
 
 
-
 
NC_011662  Tmz1t_1731  carbamoyl phosphate synthase small subunit  54.09 
 
 
380 aa  366  1e-100  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0379  carbamoyl phosphate synthase small subunit  48.41 
 
 
392 aa  366  1e-100  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_3203  carbamoyl-phosphate synthase, small subunit  50.13 
 
 
368 aa  365  1e-100  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1281  carbamoyl phosphate synthase small subunit  50.65 
 
 
381 aa  365  1e-100  Burkholderia mallei SAVP1  Bacteria  normal  0.697849  n/a   
 
 
-
 
NC_010508  Bcenmc03_1261  carbamoyl phosphate synthase small subunit  50.65 
 
 
380 aa  364  1e-99  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0131767  normal  0.191599 
 
 
-
 
NC_008060  Bcen_0809  carbamoyl phosphate synthase small subunit  50.65 
 
 
380 aa  365  1e-99  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_1290  carbamoyl phosphate synthase small subunit  50.65 
 
 
380 aa  365  1e-99  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0948613  n/a   
 
 
-
 
NC_012791  Vapar_2615  carbamoyl phosphate synthase small subunit  50.77 
 
 
389 aa  363  2e-99  Variovorax paradoxus S110  Bacteria  normal  0.218889  n/a   
 
 
-
 
NC_010681  Bphyt_2868  carbamoyl phosphate synthase small subunit  51.98 
 
 
384 aa  363  3e-99  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.00228162  normal 
 
 
-
 
NC_008390  Bamb_1167  carbamoyl phosphate synthase small subunit  51.17 
 
 
380 aa  363  3e-99  Burkholderia ambifaria AMMD  Bacteria  normal  0.278191  n/a   
 
 
-
 
NC_010551  BamMC406_1179  carbamoyl phosphate synthase small subunit  51.17 
 
 
381 aa  363  3e-99  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.381236 
 
 
-
 
NC_014248  Aazo_2282  carbamoyl-phosphate synthase small subunit  51.61 
 
 
385 aa  363  3e-99  'Nostoc azollae' 0708  Bacteria  normal  0.332421  n/a   
 
 
-
 
NC_010531  Pnec_0848  carbamoyl-phosphate synthase, small subunit  51.16 
 
 
398 aa  362  5.0000000000000005e-99  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal  0.287672 
 
 
-
 
NC_010730  SYO3AOP1_1361  carbamoyl phosphate synthase small subunit  47.35 
 
 
376 aa  362  5.0000000000000005e-99  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A1256  carbamoyl phosphate synthase small subunit  50.9 
 
 
391 aa  362  5.0000000000000005e-99  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_2030  carbamoyl phosphate synthase small subunit  51.17 
 
 
380 aa  362  6e-99  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.115427  normal 
 
 
-
 
NC_003295  RSc1519  carbamoyl phosphate synthase small subunit  50.27 
 
 
378 aa  361  1e-98  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_1540  carbamoyl-phosphate synthase, small subunit  49.07 
 
 
356 aa  361  1e-98  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_007516  Syncc9605_1152  carbamoyl phosphate synthase small subunit  50.4 
 
 
386 aa  361  2e-98  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_2036  carbamoyl phosphate synthase small subunit  50.67 
 
 
378 aa  360  3e-98  Ralstonia pickettii 12J  Bacteria  normal  0.534876  normal 
 
 
-
 
NC_008781  Pnap_1774  carbamoyl phosphate synthase small subunit  48.6 
 
 
393 aa  360  3e-98  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.0283036 
 
 
-
 
NC_013174  Jden_1322  carbamoyl-phosphate synthase, small subunit  50.38 
 
 
414 aa  359  4e-98  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.125881 
 
 
-
 
NC_007298  Daro_0938  carbamoyl-phosphate synthase small subunit  51.89 
 
 
385 aa  358  7e-98  Dechloromonas aromatica RCB  Bacteria  normal  0.742428  normal 
 
 
-
 
NC_009831  Ssed_3404  carbamoyl phosphate synthase small subunit  49.23 
 
 
385 aa  358  9.999999999999999e-98  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.0000786314 
 
 
-
 
NC_012856  Rpic12D_1728  carbamoyl phosphate synthase small subunit  50.4 
 
 
378 aa  357  9.999999999999999e-98  Ralstonia pickettii 12D  Bacteria  normal  0.590257  normal  0.961099 
 
 
-
 
NC_008578  Acel_1299  carbamoyl phosphate synthase small subunit  51.32 
 
 
395 aa  357  9.999999999999999e-98  Acidothermus cellulolyticus 11B  Bacteria  normal  0.161991  hitchhiker  0.00596115 
 
 
-
 
NC_007513  Syncc9902_1307  carbamoyl phosphate synthase small subunit  48.68 
 
 
398 aa  357  1.9999999999999998e-97  Synechococcus sp. CC9902  Bacteria  normal  0.786161  n/a   
 
 
-
 
NC_007604  Synpcc7942_2122  carbamoyl phosphate synthase small subunit  50.27 
 
 
391 aa  357  1.9999999999999998e-97  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.618886 
 
 
-
 
NC_013510  Tcur_3013  carbamoyl-phosphate synthase, small subunit  50.52 
 
 
377 aa  357  1.9999999999999998e-97  Thermomonospora curvata DSM 43183  Bacteria  normal  0.225095  n/a   
 
 
-
 
NC_008709  Ping_0896  carbamoyl-phosphate synthase, small subunit  50.53 
 
 
378 aa  357  1.9999999999999998e-97  Psychromonas ingrahamii 37  Bacteria  normal  0.348294  normal  0.560722 
 
 
-
 
NC_014210  Ndas_3103  carbamoyl-phosphate synthase, small subunit  51.72 
 
 
397 aa  356  3.9999999999999996e-97  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.450122  normal 
 
 
-
 
NC_010571  Oter_1915  carbamoyl-phosphate synthase, small subunit  48.7 
 
 
390 aa  356  3.9999999999999996e-97  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_008820  P9303_15771  carbamoyl phosphate synthase small subunit  50.27 
 
 
379 aa  355  6.999999999999999e-97  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_010524  Lcho_2823  carbamoyl-phosphate synthase, small subunit  49.37 
 
 
394 aa  355  6.999999999999999e-97  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008576  Mmc1_3019  carbamoyl-phosphate synthase small subunit  48.67 
 
 
377 aa  353  2e-96  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_007614  Nmul_A0478  carbamoyl-phosphate synthase, small subunit  51.45 
 
 
383 aa  353  2.9999999999999997e-96  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_009976  P9211_06931  carbamoyl phosphate synthase small subunit  48.93 
 
 
380 aa  352  5e-96  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  0.0298336  normal  0.187512 
 
 
-
 
NC_008700  Sama_2504  carbamoyl phosphate synthase small subunit  49.35 
 
 
381 aa  352  5.9999999999999994e-96  Shewanella amazonensis SB2B  Bacteria  normal  0.323519  normal 
 
 
-
 
NC_011901  Tgr7_0975  carbamoyl-phosphate synthase, small subunit  50.39 
 
 
379 aa  352  7e-96  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2215  carbamoyl-phosphate synthase, small subunit  49.23 
 
 
381 aa  352  7e-96  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.000311671  n/a   
 
 
-
 
NC_008789  Hhal_1776  carbamoyl-phosphate synthase, small subunit  51.59 
 
 
379 aa  352  8e-96  Halorhodospira halophila SL1  Bacteria  normal  0.0616181  n/a   
 
 
-
 
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