More than 300 homologs were found in PanDaTox collection
for query gene P9303_15771 on replicon NC_008820
Organism: Prochlorococcus marinus str. MIT 9303



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008820  P9303_15771  carbamoyl phosphate synthase small subunit  100 
 
 
379 aa  778    Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_007516  Syncc9605_1152  carbamoyl phosphate synthase small subunit  78.63 
 
 
386 aa  630  1e-179  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_007513  Syncc9902_1307  carbamoyl phosphate synthase small subunit  75.46 
 
 
398 aa  596  1e-169  Synechococcus sp. CC9902  Bacteria  normal  0.786161  n/a   
 
 
-
 
NC_009976  P9211_06931  carbamoyl phosphate synthase small subunit  66.32 
 
 
380 aa  544  1e-154  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  0.0298336  normal  0.187512 
 
 
-
 
NC_008819  NATL1_09281  carbamoyl phosphate synthase small subunit  64.47 
 
 
384 aa  531  1e-150  Prochlorococcus marinus str. NATL1A  Bacteria  normal  0.87193  normal  0.0301636 
 
 
-
 
NC_007335  PMN2A_0259  carbamoyl phosphate synthase small subunit  64.47 
 
 
384 aa  532  1e-150  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_007577  PMT9312_0848  carbamoyl phosphate synthase small subunit  55.79 
 
 
379 aa  466  9.999999999999999e-131  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_008817  P9515_10341  carbamoyl phosphate synthase small subunit  56.53 
 
 
379 aa  462  1e-129  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  n/a   
 
 
-
 
NC_009091  P9301_09071  carbamoyl phosphate synthase small subunit  55.94 
 
 
379 aa  463  1e-129  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_008816  A9601_09091  carbamoyl phosphate synthase small subunit  56.05 
 
 
379 aa  459  9.999999999999999e-129  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.347132  n/a   
 
 
-
 
NC_011884  Cyan7425_1942  carbamoyl phosphate synthase small subunit  58.98 
 
 
389 aa  452  1.0000000000000001e-126  Cyanothece sp. PCC 7425  Bacteria  normal  0.230816  normal  0.202912 
 
 
-
 
NC_007604  Synpcc7942_2122  carbamoyl phosphate synthase small subunit  59.01 
 
 
391 aa  452  1.0000000000000001e-126  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.618886 
 
 
-
 
NC_008312  Tery_2310  carbamoyl phosphate synthase small subunit  56.58 
 
 
384 aa  443  1e-123  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.162276 
 
 
-
 
NC_013161  Cyan8802_0390  carbamoyl phosphate synthase small subunit  55.91 
 
 
380 aa  441  9.999999999999999e-123  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_0381  carbamoyl phosphate synthase small subunit  55.91 
 
 
380 aa  441  9.999999999999999e-123  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011729  PCC7424_3196  carbamoyl phosphate synthase small subunit  57.89 
 
 
379 aa  438  9.999999999999999e-123  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0368063 
 
 
-
 
NC_014248  Aazo_2282  carbamoyl-phosphate synthase small subunit  57.26 
 
 
385 aa  434  1e-120  'Nostoc azollae' 0708  Bacteria  normal  0.332421  n/a   
 
 
-
 
NC_007413  Ava_4410  carbamoyl phosphate synthase small subunit  56.64 
 
 
388 aa  427  1e-118  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.924948 
 
 
-
 
NC_007498  Pcar_1613  carbamoyl phosphate synthase small subunit  51.99 
 
 
376 aa  397  1e-109  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0266912  n/a   
 
 
-
 
NC_009767  Rcas_3359  carbamoyl-phosphate synthase, small subunit  54.21 
 
 
386 aa  391  1e-108  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.663891  normal 
 
 
-
 
NC_009675  Anae109_2191  carbamoyl phosphate synthase small subunit  52 
 
 
372 aa  389  1e-107  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.352304 
 
 
-
 
NC_009523  RoseRS_4055  carbamoyl-phosphate synthase, small subunit  54.21 
 
 
386 aa  390  1e-107  Roseiflexus sp. RS-1  Bacteria  normal  0.103191  normal 
 
 
-
 
NC_008554  Sfum_0009  carbamoyl phosphate synthase small subunit  52.28 
 
 
391 aa  385  1e-106  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.35972  normal 
 
 
-
 
NC_011145  AnaeK_2240  carbamoyl phosphate synthase small subunit  52.93 
 
 
373 aa  384  1e-105  Anaeromyxobacter sp. K  Bacteria  normal  0.513182  n/a   
 
 
-
 
NC_007760  Adeh_1620  carbamoyl phosphate synthase small subunit  52.93 
 
 
373 aa  383  1e-105  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.394714  n/a   
 
 
-
 
NC_011891  A2cp1_2328  carbamoyl phosphate synthase small subunit  52.93 
 
 
373 aa  383  1e-105  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2643  carbamoyl-phosphate synthase, small subunit  52.8 
 
 
374 aa  379  1e-104  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_1858  carbamoyl phosphate synthase small subunit  50.4 
 
 
373 aa  370  1e-101  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1273  carbamoyl phosphate synthase small subunit  50.53 
 
 
374 aa  366  1e-100  Geobacter sulfurreducens PCA  Bacteria  normal  0.0567002  n/a   
 
 
-
 
NC_012918  GM21_2310  carbamoyl phosphate synthase small subunit  50.13 
 
 
374 aa  366  1e-100  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009943  Dole_0120  carbamoyl-phosphate synthase, small subunit  50.27 
 
 
380 aa  366  1e-100  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1771  carbamoyl phosphate synthase small subunit  49.6 
 
 
374 aa  366  1e-100  Geobacter metallireducens GS-15  Bacteria  normal  0.0224697  normal  0.089739 
 
 
-
 
NC_011146  Gbem_1898  carbamoyl phosphate synthase small subunit  49.87 
 
 
374 aa  363  2e-99  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_2349  carbamoyl phosphate synthase small subunit  50.27 
 
 
366 aa  362  5.0000000000000005e-99  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_014148  Plim_2032  carbamoyl-phosphate synthase, small subunit  49.08 
 
 
383 aa  360  2e-98  Planctomyces limnophilus DSM 3776  Bacteria  unclonable  0.000000277554  n/a   
 
 
-
 
NC_008609  Ppro_2527  carbamoyl phosphate synthase small subunit  50.4 
 
 
373 aa  356  2.9999999999999997e-97  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2885  carbamoyl-phosphate synthase small subunit  49.47 
 
 
389 aa  355  7.999999999999999e-97  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3404  carbamoyl phosphate synthase small subunit  50.13 
 
 
385 aa  354  1e-96  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.0000786314 
 
 
-
 
NC_008009  Acid345_2194  carbamoyl-phosphate synthase small subunit  46.4 
 
 
373 aa  354  1e-96  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_010117  COXBURSA331_A1431  carbamoyl phosphate synthase small subunit  47.37 
 
 
382 aa  353  2e-96  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_009727  CBUD_1371  carbamoyl phosphate synthase small subunit  47.37 
 
 
402 aa  353  2.9999999999999997e-96  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2083  carbamoyl phosphate synthase small subunit  51.05 
 
 
373 aa  353  2.9999999999999997e-96  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I0585  carbamoyl phosphate synthase small subunit  49.09 
 
 
384 aa  352  4e-96  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.0152244  n/a   
 
 
-
 
NC_010655  Amuc_1250  carbamoyl-phosphate synthase, small subunit  50 
 
 
372 aa  352  5e-96  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2504  carbamoyl phosphate synthase small subunit  49.48 
 
 
381 aa  352  5e-96  Shewanella amazonensis SB2B  Bacteria  normal  0.323519  normal 
 
 
-
 
NC_013173  Dbac_0133  carbamoyl-phosphate synthase, small subunit  47.47 
 
 
378 aa  352  8.999999999999999e-96  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2839  carbamoyl phosphate synthase small subunit  50.4 
 
 
390 aa  351  1e-95  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00340084  normal  0.0286195 
 
 
-
 
NC_007644  Moth_0881  carbamoyl-phosphate synthase small subunit  48.26 
 
 
361 aa  351  1e-95  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_009783  VIBHAR_00912  carbamoyl phosphate synthase small subunit  50.13 
 
 
416 aa  351  1e-95  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009457  VC0395_A1968  carbamoyl phosphate synthase small subunit  49.74 
 
 
379 aa  351  1e-95  Vibrio cholerae O395  Bacteria  normal  0.837999  n/a   
 
 
-
 
NC_008639  Cpha266_2459  carbamoyl phosphate synthase small subunit  48.26 
 
 
369 aa  351  1e-95  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.420642  n/a   
 
 
-
 
NC_009511  Swit_0435  carbamoyl phosphate synthase small subunit  49.6 
 
 
392 aa  350  2e-95  Sphingomonas wittichii RW1  Bacteria  normal  0.29183  normal 
 
 
-
 
NC_008576  Mmc1_3019  carbamoyl-phosphate synthase small subunit  46.72 
 
 
377 aa  350  3e-95  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_009379  Pnuc_1019  carbamoyl-phosphate synthase, small subunit  48.44 
 
 
397 aa  349  4e-95  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_3578  carbamoyl phosphate synthase small subunit  50 
 
 
381 aa  349  5e-95  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0674639  normal  0.11278 
 
 
-
 
NC_007925  RPC_0960  carbamoyl phosphate synthase small subunit  48.05 
 
 
396 aa  349  5e-95  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.0203745 
 
 
-
 
NC_007958  RPD_3986  carbamoyl phosphate synthase small subunit  48.56 
 
 
397 aa  349  5e-95  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_2215  carbamoyl-phosphate synthase, small subunit  48.96 
 
 
381 aa  348  6e-95  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.000311671  n/a   
 
 
-
 
NC_009901  Spea_3075  carbamoyl phosphate synthase small subunit  50.27 
 
 
381 aa  348  7e-95  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0335125  n/a   
 
 
-
 
NC_011205  SeD_A0072  carbamoyl phosphate synthase small subunit  48.81 
 
 
382 aa  348  8e-95  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.399436  normal  0.955538 
 
 
-
 
NC_008025  Dgeo_2060  carbamoyl phosphate synthase small subunit  48.45 
 
 
394 aa  348  8e-95  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.745912 
 
 
-
 
NC_011083  SeHA_C0070  carbamoyl phosphate synthase small subunit  48.81 
 
 
391 aa  348  9e-95  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_009370  OSTLU_28074  Carbamoyl-phosphate synthase S chain  46.9 
 
 
415 aa  348  1e-94  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  normal  0.210414 
 
 
-
 
NC_011004  Rpal_1470  carbamoyl phosphate synthase small subunit  47.52 
 
 
397 aa  348  1e-94  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B0073  carbamoyl phosphate synthase small subunit  48.81 
 
 
382 aa  347  2e-94  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A0074  carbamoyl phosphate synthase small subunit  48.55 
 
 
382 aa  347  2e-94  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_013456  VEA_004479  carbamoyl-phosphate synthase small chain  49.46 
 
 
379 aa  347  2e-94  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1811  carbamoyl phosphate synthase small subunit  48.27 
 
 
393 aa  347  2e-94  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.0542874 
 
 
-
 
NC_011080  SNSL254_A0070  carbamoyl phosphate synthase small subunit  48.55 
 
 
382 aa  347  3e-94  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_010498  EcSMS35_0032  carbamoyl phosphate synthase small subunit  47.88 
 
 
391 aa  346  4e-94  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
CP001509  ECD_00036  carbamoyl-phosphate synthase small subunit  47.88 
 
 
382 aa  345  5e-94  Escherichia coli BL21(DE3)  Bacteria  normal  0.53844  n/a   
 
 
-
 
CP001637  EcDH1_3567  carbamoyl-phosphate synthase, small subunit  47.88 
 
 
382 aa  345  5e-94  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A0035  carbamoyl phosphate synthase small subunit  47.88 
 
 
382 aa  345  5e-94  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_0035  carbamoyl phosphate synthase small subunit  47.88 
 
 
382 aa  345  5e-94  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_012892  B21_00035  hypothetical protein  47.88 
 
 
382 aa  345  5e-94  Escherichia coli BL21  Bacteria  normal  0.457385  n/a   
 
 
-
 
NC_010658  SbBS512_E0036  carbamoyl phosphate synthase small subunit  47.88 
 
 
382 aa  345  5e-94  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_0033  carbamoyl phosphate synthase small subunit  47.88 
 
 
382 aa  345  5e-94  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0698  carbamoyl-phosphate synthase, small subunit  48 
 
 
377 aa  345  5e-94  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.110228 
 
 
-
 
NC_013385  Adeg_0372  carbamoyl-phosphate synthase, small subunit  49.06 
 
 
359 aa  345  5e-94  Ammonifex degensii KC4  Bacteria  normal  0.386907  n/a   
 
 
-
 
NC_003295  RSc1519  carbamoyl phosphate synthase small subunit  49.07 
 
 
378 aa  345  6e-94  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_42940  carbamoyl phosphate synthase small subunit  48.4 
 
 
378 aa  345  6e-94  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00088  carbamoyl phosphate synthase small subunit  49.33 
 
 
390 aa  345  6e-94  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.562291  n/a   
 
 
-
 
NC_008345  Sfri_0975  carbamoyl phosphate synthase small subunit  49.47 
 
 
381 aa  345  8e-94  Shewanella frigidimarina NCIMB 400  Bacteria  hitchhiker  0.00141878  n/a   
 
 
-
 
NC_009253  Dred_1683  carbamoyl-phosphate synthase, small subunit  47.03 
 
 
359 aa  344  1e-93  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000104913  n/a   
 
 
-
 
NC_010468  EcolC_3623  carbamoyl phosphate synthase small subunit  47.88 
 
 
382 aa  344  1e-93  Escherichia coli ATCC 8739  Bacteria  normal  normal  0.314254 
 
 
-
 
NC_011901  Tgr7_0975  carbamoyl-phosphate synthase, small subunit  49.05 
 
 
379 aa  344  1e-93  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011059  Paes_2113  carbamoyl phosphate synthase small subunit  47.72 
 
 
371 aa  343  2e-93  Prosthecochloris aestuarii DSM 271  Bacteria  unclonable  0.000000000982338  normal  0.988223 
 
 
-
 
NC_007778  RPB_4142  carbamoyl phosphate synthase small subunit  47.78 
 
 
397 aa  344  2e-93  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.164526  normal 
 
 
-
 
NC_008709  Ping_0896  carbamoyl-phosphate synthase, small subunit  47.88 
 
 
378 aa  343  2e-93  Psychromonas ingrahamii 37  Bacteria  normal  0.348294  normal  0.560722 
 
 
-
 
NC_009436  Ent638_0591  carbamoyl phosphate synthase small subunit  48.15 
 
 
382 aa  343  2.9999999999999997e-93  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_0995  carbamoyl phosphate synthase small subunit  49.2 
 
 
381 aa  342  4e-93  Shewanella denitrificans OS217  Bacteria  normal  0.055995  n/a   
 
 
-
 
NC_009997  Sbal195_3526  carbamoyl phosphate synthase small subunit  50 
 
 
386 aa  343  4e-93  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_2940  carbamoyl phosphate synthase small subunit  49.47 
 
 
386 aa  342  5e-93  Shewanella putrefaciens CN-32  Bacteria  normal  0.185194  n/a   
 
 
-
 
NC_007651  BTH_I2783  carbamoyl phosphate synthase small subunit  48.01 
 
 
381 aa  342  5e-93  Burkholderia thailandensis E264  Bacteria  normal  0.259596  n/a   
 
 
-
 
NC_009972  Haur_4242  carbamoyl-phosphate synthase, small subunit  46.98 
 
 
376 aa  342  5e-93  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_3648  carbamoyl phosphate synthase small subunit  47.88 
 
 
382 aa  342  7e-93  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.48497  n/a   
 
 
-
 
NC_011663  Sbal223_1051  carbamoyl phosphate synthase small subunit  49.74 
 
 
387 aa  342  9e-93  Shewanella baltica OS223  Bacteria  normal  0.098868  hitchhiker  0.0000017806 
 
 
-
 
NC_007005  Psyr_4192  carbamoyl phosphate synthase small subunit  47.76 
 
 
378 aa  341  1e-92  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_4526  carbamoyl-phosphate synthase, small subunit  48.56 
 
 
405 aa  341  1e-92  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.717788  n/a   
 
 
-
 
NC_009052  Sbal_3305  carbamoyl phosphate synthase small subunit  49.87 
 
 
386 aa  341  1e-92  Shewanella baltica OS155  Bacteria  normal  0.314757  n/a   
 
 
-
 
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