Gene Sputcn32_2940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2940 
Symbol 
ID5078167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp3411320 
End bp3412480 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content47% 
IMG OID640500140 
Productcarbamoyl phosphate synthase small subunit 
Protein accessionYP_001184454 
Protein GI146294030 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0505] Carbamoylphosphate synthase small subunit 
TIGRFAM ID[TIGR01368] carbamoyl-phosphate synthase, small subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.185194 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGGTCG CGTTGACAAA GTCTGCCTTA CTCGTACTCG AAGATGGAAC CGTATTCACT 
GGCACAGCAA TTGGTGCCGA TGGACTCTCT GTTGGTGAAG TTGTTTTTAA CACTTCCATG
ACAGGTTACC AAGAAATTCT AACTGATCCA TCCTACTCAC GCCAGATTGT AACATTAACC
TACCCCCACA TTGGTAATAC TGGTACCAAT AATGAAGATA TAGAATCCTA TGGGGTTCAC
GCTTGTGGTC TTATCATTCG CGATCTTCCA CTCATCGCAA GTAGTTTCCG CAATCAACAA
AGCTTAAGTG ATTATCTCAA AGCGAACAAT GTCGTTGGCA TAGCAGATAT CGATACCCGC
AAGTTAACGC GCATTCTCCG TGAAAAAGGT GCTCAAGCCG GTTGTATTAT GGCTGGTGCA
GACTTAGACG AAGCAAAAGC CCTTGACGCT GCCAAAGCTT TCCCCGGTTT AAAGGGCATG
GATCTCGCTA AAGAAGTCAC GACTAAAACT GCCTATCCAT GGCGTAAAGG TAGCTGGCGT
TTAGTGGGTG GCTTACCTGA AGATACGCCA GCAAATGAGC TTAAATACAA AGTAGTAGCC
TACGACTACG GCGTTAAGCA AAACATTTTG CGTATGTTGG TGGATCGCGG CTGCGACGTC
ACCGTGGTTC CTGCTAAAAC CTCTGCCGCA GAAGTGTTAG CGATGAACCC AGATGGCGTA
TTCCTCTCGA ATGGCCCTGG CGATCCAGAG CCATGTGATT ACGCGATTGA AGCGATTCAG
CAGATCCTGA AAACCGACAC GCCAATTTTC GGTATCTGTT TAGGTCATCA GCTACTCGCG
CTGGCCTCGG GTGCAAAAAC CTTAAAGATG AAGTTTGGTC ACCACGGTGC AAATCATCCT
GTGAGCAATA TCGAGCAAGG TAACGTGATG ATCACTAGCC AAAACCATGG TTTTGCTGCC
GATGAAACGA CTTTACCCGC CAACATTAAA GTGACCCATA AGTCGCTATT TGATGGTTCA
CTGCAAGGTA TTCATCTGAC GGACAAACCT GCGTTCAGTT TCCAAGGTCA CCCTGAAGCG
AGCCCTGGTC CGAACGATGC CGCCCCGCTG TTCGATCACT TTATCGATCT AATCGACATA
TACCGTCAGA ACGCTAAGTA A
 
Protein sequence
MEVALTKSAL LVLEDGTVFT GTAIGADGLS VGEVVFNTSM TGYQEILTDP SYSRQIVTLT 
YPHIGNTGTN NEDIESYGVH ACGLIIRDLP LIASSFRNQQ SLSDYLKANN VVGIADIDTR
KLTRILREKG AQAGCIMAGA DLDEAKALDA AKAFPGLKGM DLAKEVTTKT AYPWRKGSWR
LVGGLPEDTP ANELKYKVVA YDYGVKQNIL RMLVDRGCDV TVVPAKTSAA EVLAMNPDGV
FLSNGPGDPE PCDYAIEAIQ QILKTDTPIF GICLGHQLLA LASGAKTLKM KFGHHGANHP
VSNIEQGNVM ITSQNHGFAA DETTLPANIK VTHKSLFDGS LQGIHLTDKP AFSFQGHPEA
SPGPNDAAPL FDHFIDLIDI YRQNAK