Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2940 |
Symbol | |
ID | 5078167 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3411320 |
End bp | 3412480 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640500140 |
Product | carbamoyl phosphate synthase small subunit |
Protein accession | YP_001184454 |
Protein GI | 146294030 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.185194 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGGTCG CGTTGACAAA GTCTGCCTTA CTCGTACTCG AAGATGGAAC CGTATTCACT GGCACAGCAA TTGGTGCCGA TGGACTCTCT GTTGGTGAAG TTGTTTTTAA CACTTCCATG ACAGGTTACC AAGAAATTCT AACTGATCCA TCCTACTCAC GCCAGATTGT AACATTAACC TACCCCCACA TTGGTAATAC TGGTACCAAT AATGAAGATA TAGAATCCTA TGGGGTTCAC GCTTGTGGTC TTATCATTCG CGATCTTCCA CTCATCGCAA GTAGTTTCCG CAATCAACAA AGCTTAAGTG ATTATCTCAA AGCGAACAAT GTCGTTGGCA TAGCAGATAT CGATACCCGC AAGTTAACGC GCATTCTCCG TGAAAAAGGT GCTCAAGCCG GTTGTATTAT GGCTGGTGCA GACTTAGACG AAGCAAAAGC CCTTGACGCT GCCAAAGCTT TCCCCGGTTT AAAGGGCATG GATCTCGCTA AAGAAGTCAC GACTAAAACT GCCTATCCAT GGCGTAAAGG TAGCTGGCGT TTAGTGGGTG GCTTACCTGA AGATACGCCA GCAAATGAGC TTAAATACAA AGTAGTAGCC TACGACTACG GCGTTAAGCA AAACATTTTG CGTATGTTGG TGGATCGCGG CTGCGACGTC ACCGTGGTTC CTGCTAAAAC CTCTGCCGCA GAAGTGTTAG CGATGAACCC AGATGGCGTA TTCCTCTCGA ATGGCCCTGG CGATCCAGAG CCATGTGATT ACGCGATTGA AGCGATTCAG CAGATCCTGA AAACCGACAC GCCAATTTTC GGTATCTGTT TAGGTCATCA GCTACTCGCG CTGGCCTCGG GTGCAAAAAC CTTAAAGATG AAGTTTGGTC ACCACGGTGC AAATCATCCT GTGAGCAATA TCGAGCAAGG TAACGTGATG ATCACTAGCC AAAACCATGG TTTTGCTGCC GATGAAACGA CTTTACCCGC CAACATTAAA GTGACCCATA AGTCGCTATT TGATGGTTCA CTGCAAGGTA TTCATCTGAC GGACAAACCT GCGTTCAGTT TCCAAGGTCA CCCTGAAGCG AGCCCTGGTC CGAACGATGC CGCCCCGCTG TTCGATCACT TTATCGATCT AATCGACATA TACCGTCAGA ACGCTAAGTA A
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Protein sequence | MEVALTKSAL LVLEDGTVFT GTAIGADGLS VGEVVFNTSM TGYQEILTDP SYSRQIVTLT YPHIGNTGTN NEDIESYGVH ACGLIIRDLP LIASSFRNQQ SLSDYLKANN VVGIADIDTR KLTRILREKG AQAGCIMAGA DLDEAKALDA AKAFPGLKGM DLAKEVTTKT AYPWRKGSWR LVGGLPEDTP ANELKYKVVA YDYGVKQNIL RMLVDRGCDV TVVPAKTSAA EVLAMNPDGV FLSNGPGDPE PCDYAIEAIQ QILKTDTPIF GICLGHQLLA LASGAKTLKM KFGHHGANHP VSNIEQGNVM ITSQNHGFAA DETTLPANIK VTHKSLFDGS LQGIHLTDKP AFSFQGHPEA SPGPNDAAPL FDHFIDLIDI YRQNAK
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