| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0995 |
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| Symbol | |
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| ID | 4017592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1132173 |
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| End bp | 1133318 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637954985 |
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| Product | carbamoyl phosphate synthase small subunit |
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| Protein accession | YP_562006 |
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| Protein GI | 91792355 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.055995 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGACACAGT CTGCCTTACT CGTACTCGAA GATGGAAGCG TTTTTTCTGG CACAGCAATT
GGTGCTAAAG GAATGTCTGT TGGTGAAGTG GTATTTAATA CTTCGATGAC AGGTTACCAA
GAAATCTTAA CGGATCCTTC CTATTCTCGA CAAATCGTTA CCTTAACTTA CCCTCACATA
GGTAATACAG GTACCAATGA TGAAGACACA GAATCCACAG GGGTTCACGC CTGTGGTCTG
ATTATTCGTG ACTTACCGCT ACTGGCAAGT AATTTTCGTA ATCAGCAGTC TTTGAGTGAT
TATCTGGTTG CTAATAATGT CGTCGGTATC GCCGATATAG ATACCCGTAA GCTGACCCGT
ATTTTGCGTG AAAAAGGTGC CTTAGCCGGT TGCATCATGG TGGGCGATAT TGATGAAGCC
AAAGCCTTAG CTGAAGCTAA AGCCTTCCCA GGTCTTAAGG GCATGGATCT CGCTAAAGAA
GTGACTACAG ATAAAGCCTA TAACTGGCGC AATGGCAGTT GGCGTTTAGT GGGCGGTTTA
CCTCATGATA CCCCAAGCGA TGAGCTTAAA TATAAGGTCG TTGCTTATGA CTATGGCGTA
AAACACAATA TTTTACGCAT GTTGGTGGAC AGAGGTTGTG ATGTGACTGT GGTTCCAGCA
CAAACACCTG CAAGCGAAGT ACTGGCGATG AATCCAGATG GGGTATTTTT ATCCAATGGA
CCTGGTGATC CAGCACCTTG TACTTATGCC ATTGAAGCCA TTCAGGCTCT GCTAAAAACT
GAAGTGCCAA TTTTTGGTAT TTGTCTTGGT CATCAGTTGC TTGCATTAGC TTCTGGCGCT
AAAACCTTAA AAATGAAATT CGGTCACCAT GGTGCTAACC ATCCGGTAAG CAATGTGGAA
AAAGGCACTG TGATGATCAC CAGTCAAAAC CATGGTTTTG CTGCCGATGA AGCCACTTTG
CCTGCCAATA TTAAAGTCAC ACATAAGTCA CTGTTTGATG GTTCACTCCA AGGTATTCAC
TTAACGGACA AGCCGGCGTT TAGCTTCCAG GGACACCCTG AAGCCAGCCC TGGCCCAAAT
GATGCCGCGC CACTGTTCGA TCACTTTATC GAGCTTATTG AACAATACCG TCACAACGTT
AAGTAA
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| Protein sequence | MTQSALLVLE DGSVFSGTAI GAKGMSVGEV VFNTSMTGYQ EILTDPSYSR QIVTLTYPHI
GNTGTNDEDT ESTGVHACGL IIRDLPLLAS NFRNQQSLSD YLVANNVVGI ADIDTRKLTR
ILREKGALAG CIMVGDIDEA KALAEAKAFP GLKGMDLAKE VTTDKAYNWR NGSWRLVGGL
PHDTPSDELK YKVVAYDYGV KHNILRMLVD RGCDVTVVPA QTPASEVLAM NPDGVFLSNG
PGDPAPCTYA IEAIQALLKT EVPIFGICLG HQLLALASGA KTLKMKFGHH GANHPVSNVE
KGTVMITSQN HGFAADEATL PANIKVTHKS LFDGSLQGIH LTDKPAFSFQ GHPEASPGPN
DAAPLFDHFI ELIEQYRHNV K
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