| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1470 |
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| Symbol | |
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| ID | 6409127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1551990 |
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| End bp | 1553183 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642711369 |
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| Product | carbamoyl phosphate synthase small subunit |
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| Protein accession | YP_001990485 |
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| Protein GI | 192289880 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAATT CAGCATCCCA TCCCGCTTGG CCGGACCACA AGCCGACCGC GCTGCTCGTG
CTTGCCGATG GCACCGTGTT CGAAGGCTTC GGCCTCGGCG CAGAGGGCCA CGCCGTTGGC
GAGGTCTGCT TCAACACCGC GATGACCGGC TACGAGGAGA TCCTCACCGA TCCGTCCTAC
GCCGGGCAGC TCATCACCTT CACCTTCCCG CATATCGGCA ACGTCGGCAC CAACGACGAG
GATATCGAGA CGGTGAACAT GGCGGCGACG CCGGGCGCGC GGGGCGTGAT CCTGCGCAGC
GCCATCACCG ACCCGTCGAA CTATCGCTCG TCGCGCCATC TCGACGCCTG GCTGAAGGCT
CGCGGCATCA TCGGCCTGTC GGGCATCGAC ACCCGTGCGC TGACCGCGCT GATCCGCAGC
AAGGGCATGC CCAACGCGGT GATCGCGCAT TCGCCCACCG GCGAGTTCGA CCTGCACGCG
CTGAAGGAAG AGGCCCGCGA GTGGCCCGGT CTGGAAGGCA TGGACCTGGT GCCGATGGTC
ACCTCGGCCC AGCGCTTCAC CTGGGACGAG ACGCCTTGGG CGTGGGGCGA GAGCTTCGGA
CGGCAGGACA AGCCCGAGTT CAACGTCGTC GCGATCGACT ACGGCATCAA ACGCAACATC
CTGCGGCTGC TGGCCGGCGA AGGCTGCAAG GTCACTGTGG TGCCCGCCAC CACTTCGGCC
GAAGACATCC TGGCGATGAA GCCGGACGGC GTGTTCCTGT CGAACGGCCC GGGCGATCCG
GCCGCGACCG GCAAATACGC GGTGCCGGTG ATTCGGAAGG TGATCGAGAC TGGCGTGCCG
ACCTTCGGCA TCTGCCTCGG ACACCAGATG CTCGGCCTCG CGCTCGGCGG CAAGACCGTG
AAGATGCATC AGGGTCACCA CGGCGCCAAT CATCCGGTCA AGGATCTCAC CACCGGCAAG
GTCGAGATCA CCTCAATGAA CCACGGCTTC GCGGTCGACA AATCGACGCT GCCGGCCAAT
GTGCAGCAGA CCCACATCTC GCTGTTCGAT GACAGCAACT GCGGCATCGC GCTGGCCGAC
AAACCGGTGT TCTCGGTGCA GTACCACCCC GAGGCATCGC CCGGTCCGCA GGACTCGCAC
TATCTGTTCC GCCGCTTCAC CGATCTGATG CGCGCGAAGA AAGCCGCCGC GTAG
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| Protein sequence | MTNSASHPAW PDHKPTALLV LADGTVFEGF GLGAEGHAVG EVCFNTAMTG YEEILTDPSY
AGQLITFTFP HIGNVGTNDE DIETVNMAAT PGARGVILRS AITDPSNYRS SRHLDAWLKA
RGIIGLSGID TRALTALIRS KGMPNAVIAH SPTGEFDLHA LKEEAREWPG LEGMDLVPMV
TSAQRFTWDE TPWAWGESFG RQDKPEFNVV AIDYGIKRNI LRLLAGEGCK VTVVPATTSA
EDILAMKPDG VFLSNGPGDP AATGKYAVPV IRKVIETGVP TFGICLGHQM LGLALGGKTV
KMHQGHHGAN HPVKDLTTGK VEITSMNHGF AVDKSTLPAN VQQTHISLFD DSNCGIALAD
KPVFSVQYHP EASPGPQDSH YLFRRFTDLM RAKKAAA
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