| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3578 |
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| Symbol | |
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| ID | 6117912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4370003 |
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| End bp | 4371148 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641635131 |
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| Product | carbamoyl phosphate synthase small subunit |
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| Protein accession | YP_001761937 |
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| Protein GI | 170727911 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0674639 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.11278 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGACAAAGT CTGCCTTACT CGTACTCGAA GATGGAACTG TATTCTCTGG CATAGCTATT
GGTGCCGATG GACATGCTGT TGGTGAAGTT GTTTTTAACA CTTCAATGAC AGGTTACCAA
GAGATCCTTA CTGATCCCTC ATATTCTCGC CAAATTGTAA CTTTAACCTA CCCTCATATT
GGTAATACTG GAACCAATGA CGAAGACACA GAATCTGATT CAGTTCATGC CTGTGGTCTA
ATCATTCGAG ATCTTCCTTT AATTGCCAGT AACTTCCGTA ATCAACAATC CCTCAGTGAC
TACCTTAAAG CCAATAACAT TGTTGGTATA GCTGATATTG ATACGCGTAA GTTAACCCGT
ATTCTACGAG AAAAAGGCGC ACAAGCTGGG TGTATCCTAG TTGGTGAGCA AGACGTAGAG
AAAGCGCTTG CAGAAGCAAA AGCTTTCCCT GGTCTAAAAG GCATGGATTT AGCTAAAGAG
GTCACGACTG ACACTCAGTA CCAGTGGCGC AACGGAAGCT GGCGTTTAGT CGGTGGTTTA
CCTGATGACT CACCAGAGTC TGATCTTAAA TATAAAGTTG TTGCTTATGA CTATGGTGTA
AAACGTAACA TCCTGCGTAT GCTAGTTGAC CGTGGTTGTG ATGTGACTGT CGTTCCAGCT
CAAACACCAG CATCTGAAGT ACTCGCGATG AATCCTGATG GGATCTTCCT GTCAAATGGT
CCTGGTGACC CAGAGCCATG TGATTACGCT ATTGCAGCAA TTCAAGAGAT TCTGAAAACA
GATATCCCAG TATTTGGGAT CTGTCTAGGC CACCAGTTAC TGGCTTTGGC TTCAGGTGCT
AAGACTTTGA AGATGAAGTT TGGTCATCAC GGTGCAAACC ACCCTGTGAG CAATATAGAG
CAAGGTAATG TGATGATCAC CAGTCAAAAC CATGGTTTTG CTGCTGATGA GACTAGTTTG
CCCGCTAACA TCAAGGTGAC ACATAAGTCA CTGTTTGATG GCTCTCTGCA AGGTATTCAT
TTAACAGATA AGCCTGCATT TAGCTTCCAG GGTCACCCTG AAGCAAGTCC AGGTCCAAAT
GATGCCGCAC CTTTGTTCAA TCACTTTATT GAACTTATCG AATTGTATCG TCAGAACGCC
AAGTAG
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| Protein sequence | MTKSALLVLE DGTVFSGIAI GADGHAVGEV VFNTSMTGYQ EILTDPSYSR QIVTLTYPHI
GNTGTNDEDT ESDSVHACGL IIRDLPLIAS NFRNQQSLSD YLKANNIVGI ADIDTRKLTR
ILREKGAQAG CILVGEQDVE KALAEAKAFP GLKGMDLAKE VTTDTQYQWR NGSWRLVGGL
PDDSPESDLK YKVVAYDYGV KRNILRMLVD RGCDVTVVPA QTPASEVLAM NPDGIFLSNG
PGDPEPCDYA IAAIQEILKT DIPVFGICLG HQLLALASGA KTLKMKFGHH GANHPVSNIE
QGNVMITSQN HGFAADETSL PANIKVTHKS LFDGSLQGIH LTDKPAFSFQ GHPEASPGPN
DAAPLFNHFI ELIELYRQNA K
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