| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_09281 |
|---|
| Symbol | carA |
|---|
| ID | 4781296 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | + |
|---|
| Start bp | 856059 |
|---|
| End bp | 857213 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640084205 |
|---|
| Product | carbamoyl phosphate synthase small subunit |
|---|
| Protein accession | YP_001014751 |
|---|
| Protein GI | 124025635 |
|---|
| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
|---|
| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.87193 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0301636 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTTTG ATACTGATAG CTCTGCAATT TTGTTATTAG AGGATGGGAC ATATTTTGAA
GGATTATCTT TTGGTGCGGT TGGAACTATT TCTGGTGAAG TCGTATTTAA TACAGGTATG
ACAGGTTATC AGGAGGTCAT TACTGATCCA AGTTATTTTG GTCAACTTAT TACGTTTACC
TATCCAGAGA TTGGAAATAC TGGAGTCAAT TATGAGGATA ATGAATCATC ACATCCTTCA
GTTAAAGGTG TGATAGCTCG TCAAATATCC AAAACTCCCA GTAACTGGAG ACATGAAATT
TCGTTCGAAA ATTGGTTAAA GGATGAAAAT GTTGTTGGAA TTCATGGAAT AGATACAAGA
TTACTTGTTA GACATATAAG AGAGTCAGGT TCTTTGAATG GAATTATTTC ATCAGAGTCA
AAATATTCAA TCGCTGAATT ATTTTCACTT TTAAAAAAAT CTCCTTCAAT GAGTGGTCTT
AATCTTGTCG ATAAAGTAAC AACAAAAAGT GCTTTTAATG CTAATTCAAG TTGTCCTGTT
GCATTTGATA TGAGAATTAA AAATACTCAA ACAATTCCAT ACAAAGTTGT TGCTATAGAT
TTTGGGATAA AGCAATCGAT ATTGGATCGA TTAGTTGCTC ATGGTTGTGA AGTAACTGTC
TTGCCTGCAA GTGCTGAAAT GACCGATGTA TTAGCTTTAT CCCCTGAAGG TGTTTTTCTT
TCCAATGGTC CTGGTGATCC TTCCACCGTC GATAGTGGTA TTAATCTTGC TAAAGATTTA
ATAGAATATA AAAAACTACC TGTTTTTGGA ATCTGCTTAG GCCATCAAAT CCTTGGATTG
GCTTTAGGTG GTAAAACTTT TAAACTTTCT TATGGACATA GAGGACTAAA TCATCCATGT
GGATTGAACG GAAAAGTTGA AATTACTAGT CAAAACCATG GATTTGCTTT GAATTCAGAA
TCTTTAAATT CCGAGAAAAT AAAAATCACC AGATTAAATT TAAACGACCA AACAGTCGCT
GCTATTTCTG TTATTGATAG GCCTTTCTTT GGTGTTCAGT ATCACCCCGA AGCGAGCCCT
GGTCCTCATG ATGCTGATCA TCATTTTAAT CATTTCGTAA CCTTAATAGA AGAACGACGA
AGAATCGTGG ATTAA
|
|---|
| Protein sequence | MFFDTDSSAI LLLEDGTYFE GLSFGAVGTI SGEVVFNTGM TGYQEVITDP SYFGQLITFT
YPEIGNTGVN YEDNESSHPS VKGVIARQIS KTPSNWRHEI SFENWLKDEN VVGIHGIDTR
LLVRHIRESG SLNGIISSES KYSIAELFSL LKKSPSMSGL NLVDKVTTKS AFNANSSCPV
AFDMRIKNTQ TIPYKVVAID FGIKQSILDR LVAHGCEVTV LPASAEMTDV LALSPEGVFL
SNGPGDPSTV DSGINLAKDL IEYKKLPVFG ICLGHQILGL ALGGKTFKLS YGHRGLNHPC
GLNGKVEITS QNHGFALNSE SLNSEKIKIT RLNLNDQTVA AISVIDRPFF GVQYHPEASP
GPHDADHHFN HFVTLIEERR RIVD
|
|---|
| |