Gene Avin_42940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_42940 
SymbolcarA 
ID7763168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4334013 
End bp4335149 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content64% 
IMG OID643807150 
Productcarbamoyl phosphate synthase small subunit 
Protein accessionYP_002801391 
Protein GI226946318 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0505] Carbamoylphosphate synthase small subunit 
TIGRFAM ID[TIGR01368] carbamoyl-phosphate synthase, small subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACTAAGC CAGCCATTCT CGCCCTTGCT GATGGCAGCA TCTTTCGTGG CGAATCCATC 
GGCGCCGATG GACAGACCAT CGGCGAGGTG GTGTTCAACA CTGCCATGAC CGGCTATCAG
GAAATCCTCA CCGATCCTTC GTATGCGCAG CAAATCGTCA CCCTGACCTA TCCGCACATC
GGCAATACCG GCATCACGCC GGAAGATGCC GAATCCGCTC GCGTGTGGGC TGCCGGCCTG
ATCATCCGCG ACCTGCCGCT GCTGGCCAGC AACTGGCGCA GCAAGCAGTC GCTGCCGGAC
TACCTTCGGG AAAACGGCTG CGTGGCCATC GCCGACATCG ATACGCGTCG CCTGACCCGT
ATCCTGCGCG AGAAGGGGTC GCAGAACGGT TGTATCCTGG TGGGGGACGA CGCCTCCGAG
GAAAAGGCCC TGGAACTGGC CCGCAGCTTC CCCGGCCTCA AGGGCATGGA TCTGGCCAAG
GTGGTCAGCT GCAGCGAGCC CTACGAATGG CGTTCCGGCG TCTGGAGCCT GGCGACCGAC
AGCCATCCGG AAATTCCGGC CGGTAAGCTG CCCTATCATG TGGTGGCCTA CGATTTCGGT
GTCAAACTGA ACATCCTGCG CATGCTGGTG GCGCGTGGTT GCCGGCTGAC CGTGGTTCCT
GCGCAGACTT CGGCCAGCAA GGTGCTGGCG ATGAATCCGG ATGGCGTGTT CCTGTCCAAC
GGCCCGGGCG ATCCCGAGCC CTGCGATTAC GCGATCCAGG CGATCAGGGA GATCCTCGAG
ACCGACATCC CGGTGTTCGG CATCTGCCTC GGCCATCAGT TGCTGGCCCT GGCCTCGGGG
GCCAGGACCG TGAAGATGGG CCATGGCCAT CACGGTGCCA ATCACCCGGT GCAGGATCTC
GACACCGGGG CCGTGATGAT CACCAGCCAG AACCACGGTT TCGCGGTGGA CGAGAACACG
CTGCCGGCCA ATCTGCGGGC GATCCACAAA TCGCTGTTCG ACGGCACCCT GCAGGGTATC
GAGCGTACCG ACAGGGCGGC CTTCAGCTTT CAGGGCCACC CGGAGGCCAG CCCAGGCCCG
CATGACGTGG CGCCGCTGTT CGACCGCTTC ATCGCCGAGA TGGCCAAGCG TCGCTGA
 
Protein sequence
MTKPAILALA DGSIFRGESI GADGQTIGEV VFNTAMTGYQ EILTDPSYAQ QIVTLTYPHI 
GNTGITPEDA ESARVWAAGL IIRDLPLLAS NWRSKQSLPD YLRENGCVAI ADIDTRRLTR
ILREKGSQNG CILVGDDASE EKALELARSF PGLKGMDLAK VVSCSEPYEW RSGVWSLATD
SHPEIPAGKL PYHVVAYDFG VKLNILRMLV ARGCRLTVVP AQTSASKVLA MNPDGVFLSN
GPGDPEPCDY AIQAIREILE TDIPVFGICL GHQLLALASG ARTVKMGHGH HGANHPVQDL
DTGAVMITSQ NHGFAVDENT LPANLRAIHK SLFDGTLQGI ERTDRAAFSF QGHPEASPGP
HDVAPLFDRF IAEMAKRR