Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_42940 |
Symbol | carA |
ID | 7763168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 4334013 |
End bp | 4335149 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643807150 |
Product | carbamoyl phosphate synthase small subunit |
Protein accession | YP_002801391 |
Protein GI | 226946318 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGACTAAGC CAGCCATTCT CGCCCTTGCT GATGGCAGCA TCTTTCGTGG CGAATCCATC GGCGCCGATG GACAGACCAT CGGCGAGGTG GTGTTCAACA CTGCCATGAC CGGCTATCAG GAAATCCTCA CCGATCCTTC GTATGCGCAG CAAATCGTCA CCCTGACCTA TCCGCACATC GGCAATACCG GCATCACGCC GGAAGATGCC GAATCCGCTC GCGTGTGGGC TGCCGGCCTG ATCATCCGCG ACCTGCCGCT GCTGGCCAGC AACTGGCGCA GCAAGCAGTC GCTGCCGGAC TACCTTCGGG AAAACGGCTG CGTGGCCATC GCCGACATCG ATACGCGTCG CCTGACCCGT ATCCTGCGCG AGAAGGGGTC GCAGAACGGT TGTATCCTGG TGGGGGACGA CGCCTCCGAG GAAAAGGCCC TGGAACTGGC CCGCAGCTTC CCCGGCCTCA AGGGCATGGA TCTGGCCAAG GTGGTCAGCT GCAGCGAGCC CTACGAATGG CGTTCCGGCG TCTGGAGCCT GGCGACCGAC AGCCATCCGG AAATTCCGGC CGGTAAGCTG CCCTATCATG TGGTGGCCTA CGATTTCGGT GTCAAACTGA ACATCCTGCG CATGCTGGTG GCGCGTGGTT GCCGGCTGAC CGTGGTTCCT GCGCAGACTT CGGCCAGCAA GGTGCTGGCG ATGAATCCGG ATGGCGTGTT CCTGTCCAAC GGCCCGGGCG ATCCCGAGCC CTGCGATTAC GCGATCCAGG CGATCAGGGA GATCCTCGAG ACCGACATCC CGGTGTTCGG CATCTGCCTC GGCCATCAGT TGCTGGCCCT GGCCTCGGGG GCCAGGACCG TGAAGATGGG CCATGGCCAT CACGGTGCCA ATCACCCGGT GCAGGATCTC GACACCGGGG CCGTGATGAT CACCAGCCAG AACCACGGTT TCGCGGTGGA CGAGAACACG CTGCCGGCCA ATCTGCGGGC GATCCACAAA TCGCTGTTCG ACGGCACCCT GCAGGGTATC GAGCGTACCG ACAGGGCGGC CTTCAGCTTT CAGGGCCACC CGGAGGCCAG CCCAGGCCCG CATGACGTGG CGCCGCTGTT CGACCGCTTC ATCGCCGAGA TGGCCAAGCG TCGCTGA
|
Protein sequence | MTKPAILALA DGSIFRGESI GADGQTIGEV VFNTAMTGYQ EILTDPSYAQ QIVTLTYPHI GNTGITPEDA ESARVWAAGL IIRDLPLLAS NWRSKQSLPD YLRENGCVAI ADIDTRRLTR ILREKGSQNG CILVGDDASE EKALELARSF PGLKGMDLAK VVSCSEPYEW RSGVWSLATD SHPEIPAGKL PYHVVAYDFG VKLNILRMLV ARGCRLTVVP AQTSASKVLA MNPDGVFLSN GPGDPEPCDY AIQAIREILE TDIPVFGICL GHQLLALASG ARTVKMGHGH HGANHPVQDL DTGAVMITSQ NHGFAVDENT LPANLRAIHK SLFDGTLQGI ERTDRAAFSF QGHPEASPGP HDVAPLFDRF IAEMAKRR
|
| |