Gene Lreu_0086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0086 
Symbol 
ID5189663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand- 
Start bp105605 
End bp106693 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content43% 
IMG OID640589881 
Productcarbamoyl phosphate synthase small subunit 
Protein accessionYP_001270698 
Protein GI148543328 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0505] Carbamoylphosphate synthase small subunit 
TIGRFAM ID[TIGR01368] carbamoyl-phosphate synthase, small subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.000481793 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGAT ATTTAATTCT AGAAGATGGT ACTGTCTATA CCGGCGAGGG TTTTGGCGCT 
ACCAAGGCAA CTCTTGGTGA GGTTGTCTTC ACAACAGGGA TGGTCGGCTA TCAAGAAGCA 
ATTACCGATC AATCATTTGC CAATCAGATT TTAGTCTTTA CCAATCCCCT CATTGGCAAC 
TATGGGATTA ATAGTGAAGA TAACGAAACA TTGTATCCTC AAATCAAGGG CGTAATTTGT 
CATCATGTTG CTCGTGTTCC CAGCAACTGG CGCATGACCG ACTCACTCCC TAATTTCTTA 
GCAAAGCACC ACATTCCTGG CCTCCAAGGA ATTGATACAC GTGAACTAGT CCGTAAGCTT 
CGTCAATATG GAACATTGCG CGGAATTATG ACCGATAATA TTACCGATAT TAAAGATAAG 
ATTGAACAGT TAAAACAAAC TTCGCCAACC CAGAACATTA TTAGCAAAGT ATCTACTAAG 
GAATCCTACG CTAATCCGGG AACTAAGCGA ACTGTTGTTG TTCTTGACTT CGGGATGAAA 
AATAGCATTC TCCGTGAATT AAATAAAAGA AACTGCAATG CAATTGTCCT TCCTTATAAC 
ACCTCGATCA GTGAAATAAT GGCGTTCAAT CCAGACGGTA TCCTCCTTTC CAACGGGCCT 
GGTGATCCGC TTGAAATGAC AGACGCAGCT GCAACCGTCG CGGAATTAGA AAAACATCTT 
CCCATTTTCG GCATTTGCAT GGGCCATCAA ATCTTTGCCC TAGCTAATGG TGCCAAAACT 
TATAAGATGA AATTTGGTCA CCGCGGTTTT AATCATCCCG TCCGTAATCT CCAAACAGGA 
AAGATCGCAT TCACCTCCCA AAATCATGGC TTTGCGGTTG ATCCATCCTC CATTGATGAT 
ACTGACCTCC AAATCACCCA CCTTGAAGTG AACGATGGCA CGGTTGAAGG ACTCCAGCAT 
TCAAAGTATC CTGCATTTTC CGTTCAGTTC CATCCAGACG CTGCGCCAGG ACCCCACGAT 
GCTGAACAGC TTTTTGATAA ATTCATGGCA TTAATTGACA GTAATAAGGA GGTCCTCACC 
TATGCCTAA
 
Protein sequence
MKRYLILEDG TVYTGEGFGA TKATLGEVVF TTGMVGYQEA ITDQSFANQI LVFTNPLIGN 
YGINSEDNET LYPQIKGVIC HHVARVPSNW RMTDSLPNFL AKHHIPGLQG IDTRELVRKL 
RQYGTLRGIM TDNITDIKDK IEQLKQTSPT QNIISKVSTK ESYANPGTKR TVVVLDFGMK 
NSILRELNKR NCNAIVLPYN TSISEIMAFN PDGILLSNGP GDPLEMTDAA ATVAELEKHL 
PIFGICMGHQ IFALANGAKT YKMKFGHRGF NHPVRNLQTG KIAFTSQNHG FAVDPSSIDD 
TDLQITHLEV NDGTVEGLQH SKYPAFSVQF HPDAAPGPHD AEQLFDKFMA LIDSNKEVLT 
YA