Gene DET1201 details

Gene Information

• Locus tag: DET1201
• Symbol: carA
• ID: 3229506
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides ethenogenes 195
• Kingdom: Bacteria
• Replicon accession: NC_002936
• Strand: +
• Start bp: 1096412
• End bp: 1097506
• Gene Length: 1095 bp
• Protein Length: 364 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 637120764
• Product: carbamoyl phosphate synthase small subunit
• Protein accession: YP_181914
• Protein GI: 57234040
• COG category: [E] Amino acid transport and metabolism; [F] Nucleotide transport and metabolism
• COG ID: [COG0505] Carbamoylphosphate synthase small subunit
• TIGRFAM ID: [TIGR01368] carbamoyl-phosphate synthase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAAATA CAGCATACCT GGTACTGGAG GACGGAACAG TATTCAGCGG CAAAAGCTTC 
GGGGCGGAAA CTGAAGCCAT AGGCGAAGTG GTCTTTAATA CCAGCATGAA CGGATATCAG 
GAAATGCTGA CTGACCCTTC GTATACCGGC CAGATTATTG TCCCCACTTA CCCTCTTATC 
GGCAACTACG GGGTAAACCC CTTTGATAAT GAATCCGCCT GCATCAGGGC AACCGCCTTT 
GGGGTACATG AGGAATGCCT GCTGCCAAAC CACTACCAGA ATAACCAAAC CATTCACTCC 
TTTCTGGAAG AATCCGGCAT ACCCGGCATA AGCGGCATAG ATACCCGCGC CATTACCCGT 
AAGCTGCGCT CTGCCGGGGT AATGAGGGGC ATGATAACCA CTACCAAAAC CCCTGAAGAA 
GCCCTTAAAA CTATCCGCAG CGCACCTGAC TACGGGCAGA TTGACTTTGT ACGCAAGATA 
AGCACTCCTT CAGCCTACGA ATGGCAAAAG GAAAAACCCT CTTTTGCCGG GTTTCATATA 
GCGGTGCTGG ACTGCGGGCT TAAGTACTCT ATACTTAACC AGCTGAAATC CCACGGCTGC 
AAAGTAACTG TTTTGCCCTG CACTGCCAGC CCGCAAGACA TAGATGCCCT TAATCCAGAC 
GGGGTGCTTC TTTCACCCGG CCCCGGCAAC CCGGAACTGC TGGACTATCT GGTAAATACA 
GTCAGATACG CCTGTGAAAA ATACCCGGTC ATGGGCATCT GTCTGGGAAA CCAGCTGATA 
GGCAAAGCCT TCGGGGCTAA AACATTCAAG CTGAAGTTCG GCCACCGGGG CGGAAACCAC 
CCGGTTAAAG ACCTTGCCAG CGGTCGGGTA TATATAACCT CGCAAAATCA CGGCTACTCC 
CTTGACCCCG CCACCCTGAA AGAAGGGCTG GAGGTCAGCC ACATAAACCT GAATGACGGC 
ACGGTGGAAG GGCTTCGCCA CCGCGAACTG CCGGTGTTCT CCATACAGTA CCACTCCGAA 
GCTTCACCCG GACCGATGGA TTCCACCTAC CTGTTCAAAC AGTTTGTGGA AATGATAAAA 
CAAACCAAAA AGTAG 

 

Protein sequence

MTNTAYLVLE DGTVFSGKSF GAETEAIGEV VFNTSMNGYQ EMLTDPSYTG QIIVPTYPLI 
GNYGVNPFDN ESACIRATAF GVHEECLLPN HYQNNQTIHS FLEESGIPGI SGIDTRAITR 
KLRSAGVMRG MITTTKTPEE ALKTIRSAPD YGQIDFVRKI STPSAYEWQK EKPSFAGFHI 
AVLDCGLKYS ILNQLKSHGC KVTVLPCTAS PQDIDALNPD GVLLSPGPGN PELLDYLVNT 
VRYACEKYPV MGICLGNQLI GKAFGAKTFK LKFGHRGGNH PVKDLASGRV YITSQNHGYS 
LDPATLKEGL EVSHINLNDG TVEGLRHREL PVFSIQYHSE ASPGPMDSTY LFKQFVEMIK 
QTKK