| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2004 |
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| Symbol | |
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| ID | 3962228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2159694 |
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| End bp | 2160875 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637916824 |
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| Product | carbamoyl phosphate synthase small subunit |
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| Protein accession | YP_523260 |
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| Protein GI | 162289254 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGTCTTTAC AGGGAAATGT TCCCCCCGCC ATCTTGGCGC TCGCAGACGG CACAGTCTAT
GTTGGTCATT CCATTGGAGC CGCCGGCTCC ACCGTCGGCG AGGTGGTGTT CAACACCGCC
ATGACCGGCT ACCAGGAAAT CCTCACAGAC CCGAGCTACT GCCAGCAAAT CGTTACCCTC
ACGTATCCGC ACATAGGCAA CTACGGCGTC AATTTTGACG ATGTTGAGGC CGATAAAGTG
CATGTGGCCG GTCTGGTCAT CAAGGACTTG CCGCTGCTGG CATCCAATTT CCGTCAAACC
ATGTCCCTGG GTGACTACCT GGTGCGCGAA GGCACGGTGG CGATTGCCAA CATCGATACC
CGCAAGCTGA CGCGCCAGTT GCGCAGCCAG GGTGCGCAAA ACGGCTGCAT CATGGCCTTG
GCGCAGGGCG AGGCGGTGAC CCAGAGCCTG ATCGACAAGG CCATTGCGCT GGCGCAGGCG
GCGCCTGCCA TGGCCGGACT GGATCTGGCC CGGGTGGTCA CGGTCAAAGA GCCCTATGCA
TGGACCCAGA CCGAGTGGCG CTTGTCCCAG CCAGTCCTCG GCGGCAAGCC CGGTTATGGA
GAACTCACAA AGCCGAAGTT TCATGTCGTG GCGTACGACT TTGGCATTAA AAAGAACATT
TTGCGCATGT TGGCCGAGCG TGGTTGCAGG GTGACCGTGG TGCCAGCGCA GACCCCTGCG
TTTGATGCGC TCAAGTACCA GCCCGATGGC ATCTTCTTGA GCAACGGGCC CGGCGACCCG
CAGCCGTGCG ACTACGCCAT TGCCGCCGTT GCCGAGTTGA TCGAGTCCGG CATTCCGACC
TTTGGCATTT GCCTGGGGCA TCAAATCATG GCGCTGGCCA GTGGTGCCAG GACCTTCAAA
ATGAAGTTTG GCCACCACGG GGCCAACCAT CCGGTCAAAG ACCTTGATAG CGGGCGCGTC
AGCATCACCA GTCAAAACCA CGGTTTTGCG GTGGATGAAA ACATGTTGCC GACTCATTTG
CGTGCCACCC ATATCAGCCT GTTCGACGGC ACGCTGCAGG GGCTGGAGCG CACCGACAAA
CCGGCGTTTT GTTTCCAAGG CCACCCGGAG GCCTCGCCGG GGCCGCACGA TATCGGCTAC
CTGTTTGACC GTTTCCTGCT GGCGATGGAG CACAGGGCAT GA
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| Protein sequence | MSLQGNVPPA ILALADGTVY VGHSIGAAGS TVGEVVFNTA MTGYQEILTD PSYCQQIVTL
TYPHIGNYGV NFDDVEADKV HVAGLVIKDL PLLASNFRQT MSLGDYLVRE GTVAIANIDT
RKLTRQLRSQ GAQNGCIMAL AQGEAVTQSL IDKAIALAQA APAMAGLDLA RVVTVKEPYA
WTQTEWRLSQ PVLGGKPGYG ELTKPKFHVV AYDFGIKKNI LRMLAERGCR VTVVPAQTPA
FDALKYQPDG IFLSNGPGDP QPCDYAIAAV AELIESGIPT FGICLGHQIM ALASGARTFK
MKFGHHGANH PVKDLDSGRV SITSQNHGFA VDENMLPTHL RATHISLFDG TLQGLERTDK
PAFCFQGHPE ASPGPHDIGY LFDRFLLAME HRA
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