Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_1622 |
Symbol | |
ID | 7090979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | - |
Start bp | 1752149 |
End bp | 1753345 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643464947 |
Product | carbamoyl-phosphate synthase, small subunit |
Protein accession | YP_002361932 |
Protein GI | 217977785 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.0014107 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGATTTTGG ATCAAGACAA AGCGCCGACC CCCGTTTGGC CGGCTCCGCG CCCGACCGCC CTTCTGGTGC TTGCGAACGG CCTTGTGCTT GAGGGCGTCG GCCTGGGGGC GACCGGCGAG GCGGTCGGCG AGGTTTGCTT CAACACGGCG ATGACCGGCT ATCAGGAAAT CCTGACTGAC CCCTCCTATG CTGGCCAGAT CGTCACCTTC ACCTTTCCTC ACATCGGCAA TGTCGGGGCC AATGACGAGG ACATCGAAAC CAGCAATCCG GCCGCCGCCG CCGGCGTGCG CGGCGCCATC GTGCATGCGC CGATCACGGG CCCGTCAAAT TACCGCTCGA CGCGCCATTT CGACGGCTGG CTCAAAAGCC GCGGCATTAT TGGCCTTTGC GGCGTCGACA CGCGGGCGCT GACCGCGCTG ATTCGCGACA GCGGCATGCC GAATGCAGTG ATCGCCCATT CGCCCGACGG CGAATTCGAC CTTGAGCATT TGAAGCGGCT CGCGGCGCAA TGGCCCGGCC TCGAAGGCAT GGATCTCGTG CCGAGCGTCG CCTCGACGCA GCGTTACGAA TGGAGCCAGA CCCCCTGGAC GCAGGCGAAC GGCTATGGCT CCGCCGAGGG CGGCAAGTTC AAGGTCGTCG CCATCGACTA TGGCGTCAAG AGCACCATCC TGCGGCTCCT CACCGACGCC GGCTGCGACG TCACCGTCGC GCCCTCGACC GCGACGGCGG CGGAAATCCT CGCGCTGAAG CCGGACGGCA TCTTTCTGTC GAACGGTCCG GGGGACCCGG CCGAGACCGG CAAATACGCC GTTCCGGTCA TCAAGGCGCT GCTCGACGAG AAAATCCCGA CCTTCGGCAT CTGCCTCGGC CACCAGATGC TGGCTCTCGC CCTTGGCGGG CGAACCGTCA AAATGCGCCA GGGCCATCAT GGCGCGAATC ATCCGGTGCA GGACTTCACC ACTGGAAAGG TCGAGATCGT CTCGATGAAT CATGGCTTTG CGGTCGACCC TTTGAGCCTT CCCGAAAATG CGCGCGAGAC GCATCGCTCG CTGTTCGATG GCTCCAATTG CGGTTTGGAG CTGACCGACC GGCCGGCTTT TTCGGTCCAG CATCATCCCG AAGCCTCGCC CGGCCCGCGC GATAGTCATT ATTTGTTCCG CCGTTTTGCC CAGATGATGG AAAAGTCAGC GGGTTAG
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Protein sequence | MILDQDKAPT PVWPAPRPTA LLVLANGLVL EGVGLGATGE AVGEVCFNTA MTGYQEILTD PSYAGQIVTF TFPHIGNVGA NDEDIETSNP AAAAGVRGAI VHAPITGPSN YRSTRHFDGW LKSRGIIGLC GVDTRALTAL IRDSGMPNAV IAHSPDGEFD LEHLKRLAAQ WPGLEGMDLV PSVASTQRYE WSQTPWTQAN GYGSAEGGKF KVVAIDYGVK STILRLLTDA GCDVTVAPST ATAAEILALK PDGIFLSNGP GDPAETGKYA VPVIKALLDE KIPTFGICLG HQMLALALGG RTVKMRQGHH GANHPVQDFT TGKVEIVSMN HGFAVDPLSL PENARETHRS LFDGSNCGLE LTDRPAFSVQ HHPEASPGPR DSHYLFRRFA QMMEKSAG
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