Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_0848 |
Symbol | |
ID | 3765649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | + |
Start bp | 784306 |
End bp | 785445 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637797370 |
Product | carbamoyl phosphate synthase small subunit |
Protein accession | YP_397344 |
Protein GI | 78779232 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAATT CCTATAAGAA AAATGCAAAA TTAGTTTTAA GTAATGGATT GATATTTCCT GGATTTTCTT TTGGATATTC GGGAACTGCT GTTGGCGAAA TAGTATTTAA TACTGGAATG ACTGGGTATC AGGAGGTTAT TACTGATCCA AGTTATTACG GACAAATATT AACATTCACT TATCCAGAAG TTGGAAATAC TGGTATTAAT ACTGAAGATT CAGAATCAAG TATTTGTGTT AAAGGAATAA TTGTTAGAAA TTATTCAACA AATAATAGTA ATTGGAGATC CCTGAAGAAT TTTAATGAAT GGTTAGTTGA AAAAAAAATT ATTGGTCTTT ATGGAATTGA TACACGAGCT CTTGTTAAAA TTTTAAGATC TAATGGTTCG ATGAATGCGG TTCTTACCTC TGAAGAAAGA ACTTTAGACA ATTGCTTAGA AATAATAAAT GAAACGCCAA AAATGGAGGG CTTGAATTTA TCAAAAGAAG TTTCTACAAA GCAACAATAT TTATGGCGGA ATCCTACAGG AACAGATTTT GATGTTAGAA AAAGATATTC TGAAAATACT AATAAACTAA AAGTAGTAGC AATTGATTTT GGAATAAAAA AATCAATTTT AAATAGACTA GTTTCTCATG GTTGTGAAAT TTTAGTTTTA CCTTCAAGTT CTTCATTGAA AGATGTTATA TCAAATAAGC CGGATGGTAT ATTCTTCTCA AATGGTCCAG GAGATCCTTC TTCTGTTACT GAAGGTATAG ATTTAGCAAG ATCACTTATT GAATATGGTG AAATACCTAT GTTTGGAATT TGCCTTGGCC ATCAAATATT TGGAATAGCC CTAGGAGGTT CTACTTATAA ACTACCTTTT GGACATCGTG GTCTAAATCA TCCTTGTGGA ATCAATAATC AAATTGAGAT AACAAGTCAG AATCATGGTT TTGCTCTTGA CCCTAATTCT CTCTCAAAGG ACATAGTCAA AATCACTCAC TATAACCTTA ACGATAATAC TGTTGCAGGA TTGGAAGTTA ATAATAAGCC AATTTTTAGT GTTCAGTATC ATCCAGAAGC AGGACCTGGT CCACATGACT CTGATTATTT ATTTAAAAAA TTTGTTTCTC TAATGTTAGA AAGATGTTGA
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Protein sequence | MINSYKKNAK LVLSNGLIFP GFSFGYSGTA VGEIVFNTGM TGYQEVITDP SYYGQILTFT YPEVGNTGIN TEDSESSICV KGIIVRNYST NNSNWRSLKN FNEWLVEKKI IGLYGIDTRA LVKILRSNGS MNAVLTSEER TLDNCLEIIN ETPKMEGLNL SKEVSTKQQY LWRNPTGTDF DVRKRYSENT NKLKVVAIDF GIKKSILNRL VSHGCEILVL PSSSSLKDVI SNKPDGIFFS NGPGDPSSVT EGIDLARSLI EYGEIPMFGI CLGHQIFGIA LGGSTYKLPF GHRGLNHPCG INNQIEITSQ NHGFALDPNS LSKDIVKITH YNLNDNTVAG LEVNNKPIFS VQYHPEAGPG PHDSDYLFKK FVSLMLERC
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