Gene Ndas_3103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3103 
Symbol 
ID9246959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3717289 
End bp3718482 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content73% 
IMG OID 
Productcarbamoyl-phosphate synthase, small subunit 
Protein accessionYP_003681018 
Protein GI297562044 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.450122 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACAG AACAGAACAC CCGGGCCGCC CACGGCCCGG CGGAGGAGGG GGCGAACGTG 
TCCGAGAGCG GACCCGCGAT TCTGGTACTC GAGGACGGCC GTGTCTTCCA CGGCCGCTCC
TTCGGCGCCA CCGGGGAGAC CTTCGGCGAG GCGGTCTTCA ACACCGGCAT GACCGGCTAC
CAGGAGACCC TCACCGACCC CTCGTACCAC CGCCAGATCG TGGTGATGAC CGCCCCCCAC
ATCGGCAACA CCGGCGTCAA CGACGACGAC CCCGAGTCCG GCCGCGTCTG GGTCGCCGGG
TACGTCGTGC GCGAGCCCGC CCGCATCACC TCCAACTGGC GGGCCGAGCG CACCCTGGAC
GAGGAGCTGC GCCGCCAGGG CGTGGTCGGC ATCGCCCTCA CCGGCACCCG CGCCCTCACC
CGCCACCTGC GCGACAAGGG CGTCATGCGC GCCGCCATCA GCACCACCGA GACCGACCCG
CGGGCCCTGC TGGAGCGCGT GCGCCAGCAG CCCACCATGG CCGGGGCCGA CCTGGCCGCC
GAGGTCAGCA CCGGCGAGCC CTACGAGGTC CTGCCGCCCG AGGGCGTGAC CGCCCGCTTC
CACGTCGCCG CCGTGGACCT GGGCATCAAG GCCATGACCC CCCAGCGCCT GGCCGAGCGG
GGGTGCCGGG TCACCGTGCT GCCCTCCACC GCCACCGCCG AGGAGATCCT CGCCCTGGAC
CCGGACGGGG TGTTCTTCAG CAACGGCCCC GGCGACCCCG CCACCGCCGA CGGGCCCGTC
ACCGCCATGC GCGGCGTCCT GGACGCGGGC AGGCCGCTCT TCGGCATCTG CTTCGGCAAC
CAGATCCTGG GGCGCGCCCT GGACCTGGGC ACCTACAAGC TGCCCTTCGG GCACCGGGGC
GTCAACCAGC CGGTGATCGA CACCCGCTCC GGCAGGGTCG CCATCACCAG CCAGAACCAC
GGCTTCGCCG TCGAGGCCCC CCTCGACGAG CCCTTCGACA CCCCCTACGG CCGGGCCGAG
GTCAGCCACA TCGGCCTCAA CGACCGCGTC GTCGAGGGCC TGCGGCTGCT GGACCGCCCC
GCGTTCAGCG TCCAGTTCCA CCCGGAGGCC GCCGCCGGCC CCCACGACGC CGCCGAACTC
TTCGACGCGT TCGTCGACCT GATGTCCGCC CAGCCCGCTC CGGCTGCCAA GTAG
 
Protein sequence
MSTEQNTRAA HGPAEEGANV SESGPAILVL EDGRVFHGRS FGATGETFGE AVFNTGMTGY 
QETLTDPSYH RQIVVMTAPH IGNTGVNDDD PESGRVWVAG YVVREPARIT SNWRAERTLD
EELRRQGVVG IALTGTRALT RHLRDKGVMR AAISTTETDP RALLERVRQQ PTMAGADLAA
EVSTGEPYEV LPPEGVTARF HVAAVDLGIK AMTPQRLAER GCRVTVLPST ATAEEILALD
PDGVFFSNGP GDPATADGPV TAMRGVLDAG RPLFGICFGN QILGRALDLG TYKLPFGHRG
VNQPVIDTRS GRVAITSQNH GFAVEAPLDE PFDTPYGRAE VSHIGLNDRV VEGLRLLDRP
AFSVQFHPEA AAGPHDAAEL FDAFVDLMSA QPAPAAK