More than 300 homologs were found in PanDaTox collection
for query gene Ndas_3103 on replicon NC_014210
Organism: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014210  Ndas_3103  carbamoyl-phosphate synthase, small subunit  100 
 
 
397 aa  801    Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.450122  normal 
 
 
-
 
NC_007333  Tfu_1056  carbamoyl-phosphate synthase small subunit  78.29 
 
 
416 aa  612  9.999999999999999e-175  Thermobifida fusca YX  Bacteria  normal  0.964387  n/a   
 
 
-
 
NC_013595  Sros_2807  Carbamoyl-phosphate synthase (glutamine- hydrolyzing)  75.2 
 
 
400 aa  558  1e-158  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_3013  carbamoyl-phosphate synthase, small subunit  74.18 
 
 
377 aa  552  1e-156  Thermomonospora curvata DSM 43183  Bacteria  normal  0.225095  n/a   
 
 
-
 
NC_014165  Tbis_1354  carbamoyl-phosphate synthase small subunit  72.88 
 
 
372 aa  524  1e-147  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0370749 
 
 
-
 
NC_008578  Acel_1299  carbamoyl phosphate synthase small subunit  68.9 
 
 
395 aa  519  1e-146  Acidothermus cellulolyticus 11B  Bacteria  normal  0.161991  hitchhiker  0.00596115 
 
 
-
 
NC_009921  Franean1_1709  carbamoyl phosphate synthase small subunit  67.4 
 
 
397 aa  494  1e-139  Frankia sp. EAN1pec  Bacteria  normal  0.0706412  normal  0.0202078 
 
 
-
 
NC_013521  Sked_17990  carbamoyl-phosphate synthase small subunit  66.23 
 
 
420 aa  490  1e-137  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_2430  carbamoyl phosphate synthase small subunit  68.48 
 
 
378 aa  489  1e-137  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2404  carbamoyl-phosphate synthase, small subunit  65.76 
 
 
392 aa  487  1e-136  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_3133  carbamoyl-phosphate synthase, small subunit  69.42 
 
 
388 aa  487  1e-136  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.266223  n/a   
 
 
-
 
NC_009664  Krad_3002  carbamoyl phosphate synthase small subunit  64.99 
 
 
397 aa  488  1e-136  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.541041 
 
 
-
 
NC_011886  Achl_2000  carbamoyl phosphate synthase small subunit  65.14 
 
 
428 aa  473  1e-132  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000251671 
 
 
-
 
NC_009380  Strop_1855  carbamoyl-phosphate synthase, small subunit  63.73 
 
 
386 aa  471  1e-132  Salinispora tropica CNB-440  Bacteria  normal  0.459247  normal 
 
 
-
 
NC_008541  Arth_2263  carbamoyl phosphate synthase small subunit  63.83 
 
 
420 aa  474  1e-132  Arthrobacter sp. FB24  Bacteria  normal  0.181479  n/a   
 
 
-
 
NC_013174  Jden_1322  carbamoyl-phosphate synthase, small subunit  63.19 
 
 
414 aa  470  1.0000000000000001e-131  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.125881 
 
 
-
 
NC_009953  Sare_1848  carbamoyl-phosphate synthase, small subunit  63.83 
 
 
386 aa  471  1.0000000000000001e-131  Salinispora arenicola CNS-205  Bacteria  normal  0.293096  normal 
 
 
-
 
NC_013530  Xcel_1711  carbamoyl-phosphate synthase, small subunit  63.14 
 
 
413 aa  463  1e-129  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0172822  n/a   
 
 
-
 
NC_013093  Amir_5242  carbamoyl-phosphate synthase, small subunit  65.94 
 
 
370 aa  461  1e-129  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_0918  carbamoyl-phosphate synthase, small subunit  59.9 
 
 
403 aa  458  9.999999999999999e-129  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_014151  Cfla_1845  carbamoyl-phosphate synthase, small subunit  65.12 
 
 
405 aa  460  9.999999999999999e-129  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.295776 
 
 
-
 
NC_012669  Bcav_2037  carbamoyl-phosphate synthase, small subunit  64.84 
 
 
405 aa  458  9.999999999999999e-129  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.0185668 
 
 
-
 
NC_013441  Gbro_2339  carbamoyl-phosphate synthase, small subunit  63.56 
 
 
378 aa  458  9.999999999999999e-129  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_12590  carbamoyl-phosphate synthase small subunit  64.46 
 
 
394 aa  455  1e-127  Micrococcus luteus NCTC 2665  Bacteria  normal  0.188848  n/a   
 
 
-
 
NC_009338  Mflv_3744  carbamoyl phosphate synthase small subunit  64.71 
 
 
387 aa  457  1e-127  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.36566  normal  0.0290185 
 
 
-
 
NC_013159  Svir_15580  carbamoyl-phosphate synthase small subunit  62.97 
 
 
378 aa  455  1e-127  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_010816  BLD_0084  carbamoyl phosphate synthase small subunit  60.73 
 
 
407 aa  454  1.0000000000000001e-126  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_4276  carbamoyl-phosphate synthase, small subunit  63.47 
 
 
404 aa  454  1.0000000000000001e-126  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.381159 
 
 
-
 
NC_013947  Snas_3152  carbamoyl-phosphate synthase small subunit  58.07 
 
 
412 aa  451  1e-125  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.322749  hitchhiker  0.000625968 
 
 
-
 
NC_007777  Francci3_3199  carbamoyl phosphate synthase small subunit  61.28 
 
 
421 aa  449  1e-125  Frankia sp. CcI3  Bacteria  decreased coverage  0.00261776  normal 
 
 
-
 
NC_009565  TBFG_11412  carbamoyl phosphate synthase small subunit  63.17 
 
 
376 aa  451  1e-125  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.00978215  normal  0.266084 
 
 
-
 
NC_008726  Mvan_2663  carbamoyl phosphate synthase small subunit  63.61 
 
 
376 aa  451  1e-125  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_2407  carbamoyl phosphate synthase small subunit  64.15 
 
 
387 aa  447  1.0000000000000001e-124  Mycobacterium sp. JLS  Bacteria  normal  0.263156  normal 
 
 
-
 
NC_008146  Mmcs_2366  carbamoyl phosphate synthase small subunit  64.15 
 
 
387 aa  447  1.0000000000000001e-124  Mycobacterium sp. MCS  Bacteria  normal  0.122091  n/a   
 
 
-
 
NC_008705  Mkms_2413  carbamoyl phosphate synthase small subunit  64.15 
 
 
387 aa  447  1.0000000000000001e-124  Mycobacterium sp. KMS  Bacteria  normal  normal  0.199018 
 
 
-
 
NC_014158  Tpau_2582  carbamoyl-phosphate synthase, small subunit  62.16 
 
 
378 aa  442  1e-123  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.659057  n/a   
 
 
-
 
NC_013172  Bfae_14760  carbamoyl-phosphate synthase small subunit  58.46 
 
 
402 aa  432  1e-120  Brachybacterium faecium DSM 4810  Bacteria  normal  0.865636  n/a   
 
 
-
 
NC_013169  Ksed_12680  carbamoyl-phosphate synthase small subunit  60.62 
 
 
423 aa  433  1e-120  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.20639  normal  0.0925455 
 
 
-
 
NC_009523  RoseRS_4055  carbamoyl-phosphate synthase, small subunit  53.72 
 
 
386 aa  373  1e-102  Roseiflexus sp. RS-1  Bacteria  normal  0.103191  normal 
 
 
-
 
NC_009767  Rcas_3359  carbamoyl-phosphate synthase, small subunit  54.13 
 
 
386 aa  374  1e-102  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.663891  normal 
 
 
-
 
NC_011831  Cagg_2643  carbamoyl-phosphate synthase, small subunit  52.93 
 
 
374 aa  367  1e-100  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_2122  carbamoyl phosphate synthase small subunit  51.03 
 
 
391 aa  364  2e-99  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.618886 
 
 
-
 
NC_007512  Plut_0156  carbamoyl phosphate synthase small subunit  49.46 
 
 
369 aa  362  7.0000000000000005e-99  Chlorobium luteolum DSM 273  Bacteria  normal  0.983052  normal  0.416855 
 
 
-
 
NC_014148  Plim_2032  carbamoyl-phosphate synthase, small subunit  50.13 
 
 
383 aa  357  1.9999999999999998e-97  Planctomyces limnophilus DSM 3776  Bacteria  unclonable  0.000000277554  n/a   
 
 
-
 
NC_009253  Dred_1683  carbamoyl-phosphate synthase, small subunit  52.72 
 
 
359 aa  357  1.9999999999999998e-97  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000104913  n/a   
 
 
-
 
NC_009943  Dole_0120  carbamoyl-phosphate synthase, small subunit  51.72 
 
 
380 aa  356  3.9999999999999996e-97  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_2459  carbamoyl phosphate synthase small subunit  48.24 
 
 
369 aa  353  2.9999999999999997e-96  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.420642  n/a   
 
 
-
 
NC_002939  GSU1273  carbamoyl phosphate synthase small subunit  49.21 
 
 
374 aa  353  4e-96  Geobacter sulfurreducens PCA  Bacteria  normal  0.0567002  n/a   
 
 
-
 
NC_007498  Pcar_1613  carbamoyl phosphate synthase small subunit  50 
 
 
376 aa  352  4e-96  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0266912  n/a   
 
 
-
 
NC_011884  Cyan7425_1942  carbamoyl phosphate synthase small subunit  48.34 
 
 
389 aa  352  5e-96  Cyanothece sp. PCC 7425  Bacteria  normal  0.230816  normal  0.202912 
 
 
-
 
NC_011138  MADE_02244  carbamoyl-phosphate synthase small subunit  47.78 
 
 
440 aa  352  5.9999999999999994e-96  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.0231375  n/a   
 
 
-
 
NC_011060  Ppha_0218  carbamoyl phosphate synthase small subunit  48.37 
 
 
367 aa  352  8e-96  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I2783  carbamoyl phosphate synthase small subunit  50.13 
 
 
381 aa  351  1e-95  Burkholderia thailandensis E264  Bacteria  normal  0.259596  n/a   
 
 
-
 
NC_009080  BMA10247_0564  carbamoyl phosphate synthase small subunit  50.13 
 
 
381 aa  350  2e-95  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A0587  carbamoyl phosphate synthase small subunit  50.13 
 
 
381 aa  350  2e-95  Burkholderia mallei NCTC 10229  Bacteria  normal  0.368687  n/a   
 
 
-
 
NC_006348  BMA0770  carbamoyl phosphate synthase small subunit  50.13 
 
 
381 aa  350  2e-95  Burkholderia mallei ATCC 23344  Bacteria  normal  0.76287  n/a   
 
 
-
 
NC_007510  Bcep18194_A4432  carbamoyl phosphate synthase small subunit  50.4 
 
 
380 aa  350  2e-95  Burkholderia sp. 383  Bacteria  hitchhiker  0.00120805  normal 
 
 
-
 
NC_009675  Anae109_2191  carbamoyl phosphate synthase small subunit  52.38 
 
 
372 aa  350  2e-95  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.352304 
 
 
-
 
NC_008785  BMASAVP1_A1281  carbamoyl phosphate synthase small subunit  50.13 
 
 
381 aa  350  2e-95  Burkholderia mallei SAVP1  Bacteria  normal  0.697849  n/a   
 
 
-
 
NC_009074  BURPS668_1475  carbamoyl phosphate synthase small subunit  50.13 
 
 
381 aa  349  4e-95  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1858  carbamoyl phosphate synthase small subunit  49.2 
 
 
373 aa  349  4e-95  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_1608  carbamoyl phosphate synthase small subunit  49.87 
 
 
381 aa  348  1e-94  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_0778  carbamoyl-phosphate synthase small subunit  50 
 
 
376 aa  348  1e-94  Methylobacillus flagellatus KT  Bacteria  normal  0.42563  hitchhiker  0.000147727 
 
 
-
 
NC_009076  BURPS1106A_1505  carbamoyl phosphate synthase small subunit  49.87 
 
 
381 aa  347  1e-94  Burkholderia pseudomallei 1106a  Bacteria  normal  0.188244  n/a   
 
 
-
 
NC_011901  Tgr7_0975  carbamoyl-phosphate synthase, small subunit  49.34 
 
 
379 aa  348  1e-94  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_1261  carbamoyl phosphate synthase small subunit  49.87 
 
 
380 aa  347  2e-94  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0131767  normal  0.191599 
 
 
-
 
NC_013161  Cyan8802_0390  carbamoyl phosphate synthase small subunit  48.43 
 
 
380 aa  347  3e-94  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_0381  carbamoyl phosphate synthase small subunit  48.43 
 
 
380 aa  347  3e-94  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_014248  Aazo_2282  carbamoyl-phosphate synthase small subunit  47.83 
 
 
385 aa  346  4e-94  'Nostoc azollae' 0708  Bacteria  normal  0.332421  n/a   
 
 
-
 
NC_007517  Gmet_1771  carbamoyl phosphate synthase small subunit  47.89 
 
 
374 aa  346  4e-94  Geobacter metallireducens GS-15  Bacteria  normal  0.0224697  normal  0.089739 
 
 
-
 
NC_008228  Patl_2215  carbamoyl-phosphate synthase, small subunit  47.79 
 
 
381 aa  345  8e-94  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.000311671  n/a   
 
 
-
 
NC_008060  Bcen_0809  carbamoyl phosphate synthase small subunit  49.6 
 
 
380 aa  345  8.999999999999999e-94  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_1290  carbamoyl phosphate synthase small subunit  49.6 
 
 
380 aa  345  8.999999999999999e-94  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0948613  n/a   
 
 
-
 
NC_007413  Ava_4410  carbamoyl phosphate synthase small subunit  48.82 
 
 
388 aa  344  1e-93  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.924948 
 
 
-
 
NC_011145  AnaeK_2240  carbamoyl phosphate synthase small subunit  51.98 
 
 
373 aa  344  1e-93  Anaeromyxobacter sp. K  Bacteria  normal  0.513182  n/a   
 
 
-
 
NC_010831  Cphamn1_2349  carbamoyl phosphate synthase small subunit  47.98 
 
 
366 aa  344  2e-93  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_0873  carbamoyl phosphate synthase small subunit  51.34 
 
 
384 aa  343  2.9999999999999997e-93  Burkholderia phymatum STM815  Bacteria  normal  0.644445  normal  0.264285 
 
 
-
 
NC_007614  Nmul_A0478  carbamoyl-phosphate synthase, small subunit  50.13 
 
 
383 aa  343  2.9999999999999997e-93  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_2328  carbamoyl phosphate synthase small subunit  51.45 
 
 
373 aa  343  4e-93  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_010803  Clim_2299  carbamoyl phosphate synthase small subunit  47.97 
 
 
369 aa  343  4e-93  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.0000401664  n/a   
 
 
-
 
NC_008740  Maqu_3359  carbamoyl-phosphate synthase, small subunit  48.95 
 
 
381 aa  342  5.999999999999999e-93  Marinobacter aquaeolei VT8  Bacteria  normal  0.365692  n/a   
 
 
-
 
NC_009379  Pnuc_1019  carbamoyl-phosphate synthase, small subunit  48.58 
 
 
397 aa  342  7e-93  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2527  carbamoyl phosphate synthase small subunit  49.2 
 
 
373 aa  342  8e-93  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A1256  carbamoyl phosphate synthase small subunit  50.26 
 
 
391 aa  341  1e-92  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_2310  carbamoyl phosphate synthase small subunit  48.01 
 
 
384 aa  341  1e-92  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.162276 
 
 
-
 
NC_007912  Sde_2729  carbamoyl-phosphate synthase small subunit  47.88 
 
 
387 aa  340  2e-92  Saccharophagus degradans 2-40  Bacteria  normal  0.422158  normal 
 
 
-
 
NC_012856  Rpic12D_1728  carbamoyl phosphate synthase small subunit  48.8 
 
 
378 aa  340  2e-92  Ralstonia pickettii 12D  Bacteria  normal  0.590257  normal  0.961099 
 
 
-
 
NC_013385  Adeg_0372  carbamoyl-phosphate synthase, small subunit  51.92 
 
 
359 aa  340  2e-92  Ammonifex degensii KC4  Bacteria  normal  0.386907  n/a   
 
 
-
 
NC_007760  Adeh_1620  carbamoyl phosphate synthase small subunit  51.45 
 
 
373 aa  340  2.9999999999999998e-92  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.394714  n/a   
 
 
-
 
NC_010682  Rpic_2036  carbamoyl phosphate synthase small subunit  48.8 
 
 
378 aa  340  2.9999999999999998e-92  Ralstonia pickettii 12J  Bacteria  normal  0.534876  normal 
 
 
-
 
NC_002977  MCA1853  carbamoyl phosphate synthase small subunit  50.27 
 
 
378 aa  339  4e-92  Methylococcus capsulatus str. Bath  Bacteria  normal  0.0936768  n/a   
 
 
-
 
NC_008340  Mlg_1982  carbamoyl-phosphate synthase small subunit  50.66 
 
 
386 aa  339  5.9999999999999996e-92  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.157941  normal  0.0125598 
 
 
-
 
NC_007298  Daro_0938  carbamoyl-phosphate synthase small subunit  49.33 
 
 
385 aa  338  7e-92  Dechloromonas aromatica RCB  Bacteria  normal  0.742428  normal 
 
 
-
 
NC_010681  Bphyt_2868  carbamoyl phosphate synthase small subunit  49.74 
 
 
384 aa  338  7e-92  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.00228162  normal 
 
 
-
 
NC_012918  GM21_2310  carbamoyl phosphate synthase small subunit  46.72 
 
 
374 aa  338  7e-92  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010483  TRQ2_0379  carbamoyl phosphate synthase small subunit  47.46 
 
 
392 aa  338  9.999999999999999e-92  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0362  carbamoyl phosphate synthase small subunit  47.46 
 
 
392 aa  338  9.999999999999999e-92  Thermotoga petrophila RKU-1  Bacteria  normal  0.0108123  n/a   
 
 
-
 
NC_013889  TK90_0698  carbamoyl-phosphate synthase, small subunit  47.77 
 
 
377 aa  338  9.999999999999999e-92  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.110228 
 
 
-
 
NC_010655  Amuc_1250  carbamoyl-phosphate synthase, small subunit  49.74 
 
 
372 aa  337  1.9999999999999998e-91  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_1898  carbamoyl phosphate synthase small subunit  46.46 
 
 
374 aa  337  1.9999999999999998e-91  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
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