| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1709 |
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| Symbol | |
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| ID | 5670111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2041745 |
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| End bp | 2042938 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641240627 |
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| Product | carbamoyl phosphate synthase small subunit |
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| Protein accession | YP_001506053 |
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| Protein GI | 158313545 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0706412 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0202078 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGGCT TGGACAGGCA GCCGGCTCCG CCGGAGCGGG AACAGGCCCG GCGCGGGCCG
GGAGCGCCCC GCCGCGCGGT GCTCATGCTC GAGGACGGCC GGAGCTTCGC CGGGGACGCG
TTCGGCTCGG TCGGCGAGGC GTTCGGCGAG GCGGTCTTCT CCACCGGGAT GACCGGCTAC
CAGGAGACCC TCACCGACCC GTCGTTCCAC CGTCAGGTCG TGATCATGAC GGCGCCGCAC
ATCGGCAACA CCGGGGTGAA CGACACCGAC TACGAGTCCG ACCGCATCCA GGTGGCCGGC
TTCGTTGTGC GGGACCCGAG CCGGCTGGCG TCGAACTGGC GCGCCCAACG CACCCTGGAC
GACGAGCTCG AGAACGCCGG CGTGGTCGGG ATCAGCGGGG TCGACACCCG CGCGCTGACC
CGTCACCTGC GCGAGCGCGG CGCGATGCGG TGCGGGGTCA GCAGCACCGA CACCGATCTC
GACTCGCTGC TCGACCGGGT GCGCGAGTCG CCGGAGATGG TCGGCGCGGA CCTCGCCCCG
GAGGTCAGCA CGGACAAGCC CTACGTCGTC GAGGCGCGGT CGGGCCTGCC GCTCTTCACC
GTCGCCGCGC TGGACCTGGG CATCAAGCGG AACACCCCGC TCTCCATGGC AGCGCTGGGC
TGCGAGGTGC ACGTGCTGCC GGCCCGCAGC ACGGCCGCCG AGCTGCTGGC CCTCTCGCCC
GACGGGGTCT TCCTCTCGAA CGGCCCGGGT GACCCGGCCC GCGCGGACTA CGCGGTCGAG
ACGCTCACCG GGGTGCTGGA GGCGGGTGTC CCCGTCTTCG GGATCTGTTT CGGCAACCAG
GTGCTCGCAC GGGCCCTGGG CTTCGAGACG TACAAGCTGA CCTACGGCCA CCGCGGCGTG
AACCAGCCCG TGGCCGACAC CCGGACCGGC CGGATCGCGG TCACCAGCCA CAACCACGGC
TTCGCGGTGC GCGCGCCGCT GACCGGTACG ACCGACACCC CCTACGGGCG GGTCGAGGTG
AGCCACGTGG CGCTCAACGA CGACGTGGTG GAGGGCCTGA CCTGCCTGGA CGTGCCGGCG
TTCAGTGTCC AGTTCCATCC CGAGGCGGCG CCTGGCCCGC ACGACGCCCA GGGACTGTTC
GACCGGTTCT GCGGCCTGAT GGCGGCCGGC CGGCGGAAGC GGGGAGAAGG CTGA
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| Protein sequence | MTGLDRQPAP PEREQARRGP GAPRRAVLML EDGRSFAGDA FGSVGEAFGE AVFSTGMTGY
QETLTDPSFH RQVVIMTAPH IGNTGVNDTD YESDRIQVAG FVVRDPSRLA SNWRAQRTLD
DELENAGVVG ISGVDTRALT RHLRERGAMR CGVSSTDTDL DSLLDRVRES PEMVGADLAP
EVSTDKPYVV EARSGLPLFT VAALDLGIKR NTPLSMAALG CEVHVLPARS TAAELLALSP
DGVFLSNGPG DPARADYAVE TLTGVLEAGV PVFGICFGNQ VLARALGFET YKLTYGHRGV
NQPVADTRTG RIAVTSHNHG FAVRAPLTGT TDTPYGRVEV SHVALNDDVV EGLTCLDVPA
FSVQFHPEAA PGPHDAQGLF DRFCGLMAAG RRKRGEG
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