| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5242 |
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| Symbol | |
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| ID | 8329444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6239628 |
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| End bp | 6240740 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644945681 |
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| Product | carbamoyl-phosphate synthase, small subunit |
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| Protein accession | YP_003102909 |
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| Protein GI | 256379249 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGCG CGGCACTGGT GCTGGAGGAC GGCCGCGTCT TCCGCGGCGA GGCGTACGGC
GCGCGCGGCG CGTCGCTGGG CGAGGCGGTG TTCTCCACCG CCATGACCGG CTACCAGGAG
ACCCTGACCG ACCCGTCGTA CCACCGGCAG ATCGTGGTGC AGACCGCCCC GCAGATCGGC
AACACCGGCT GGAACGACGA GGACGACGAG TCGACCCGCA TCTGGGTCGC GGGCTACGTC
GTGCGCGACC CCGCGCGCGT CCCGTCCAAC TGGCGCTCCC GGCGCGGGCT GGACGAGGAG
CTGGAGCGGC AGGGCGTCGT CGGCATCGCG GGCGTGGACA CCCGGATGCT GACCCGGCAC
CTGCGCGAGC GCGGCGCCAT GCGCGCCGGC GTGTTCTCCG GCGACGAGCT GGGCACCGCC
GAGGAGATGC TGGAGCGCGT GCGCAGCGCC CCGGAGATGA AGGGCGCGAA CCTCGCGGGC
GACGTCACCA CCGCCGAGCC TTACACCGTC GAGGCGGTCG GCGAGCGCAG GTTCACCGTC
GCCGCGCTCG ACCTGGGCAT CAAGTCCAAC ACCCCCAGGA TGCTGGCCGC GCGCGGCATC
GAGGTCCGCG TGCTGCCGCT GACGTCCACC CTGGACGAGC TGCTGGCCGT GGGCGCCGAC
GGCGTCTTCC TGTCCAACGG CCCCGGCGAC CCCGCCACCC AGGCGCACGC CGTGGACCTC
ACCAGGGGCG TGCTGGAGCG CAGGATCCCG CTCTTCGGCA TCTGCTTCGG CAACCAGATC
CTCGGCCGCG CCCTCGGCCG CGAGACCTAC AAGATGCGCT ACGGCCACCG GGGCATCAAC
ATCCCGGTGA TCGACGTGGC GTCCGGCCGG GTCGCCATCA CCTCGCAGAA CCACGGCTTC
GCCCTGGAGG GCGAGCCCGG CGAGGAGTTC GGCACCGACT TCGGCCGCGC CCAGCTGAGC
CACTACTGCC CCAACGACGG CACCGTCGAG GGCGTGCGCG CGCTGGACGT GCCCGCGTTC
AGCGTGCAGT ACCACCCGGA GGCGGCTGCG GGTCCGCACG ACGCCGCGCC CCTGTTCGAC
GAGTTCGTGA CCCTGATGAG CGAGGCCCGC TGA
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| Protein sequence | MSSAALVLED GRVFRGEAYG ARGASLGEAV FSTAMTGYQE TLTDPSYHRQ IVVQTAPQIG
NTGWNDEDDE STRIWVAGYV VRDPARVPSN WRSRRGLDEE LERQGVVGIA GVDTRMLTRH
LRERGAMRAG VFSGDELGTA EEMLERVRSA PEMKGANLAG DVTTAEPYTV EAVGERRFTV
AALDLGIKSN TPRMLAARGI EVRVLPLTST LDELLAVGAD GVFLSNGPGD PATQAHAVDL
TRGVLERRIP LFGICFGNQI LGRALGRETY KMRYGHRGIN IPVIDVASGR VAITSQNHGF
ALEGEPGEEF GTDFGRAQLS HYCPNDGTVE GVRALDVPAF SVQYHPEAAA GPHDAAPLFD
EFVTLMSEAR
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