More than 300 homologs were found in PanDaTox collection
for query gene Ksed_12680 on replicon NC_013169
Organism: Kytococcus sedentarius DSM 20547



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013169  Ksed_12680  carbamoyl-phosphate synthase small subunit  100 
 
 
423 aa  851    Kytococcus sedentarius DSM 20547  Bacteria  normal  0.20639  normal  0.0925455 
 
 
-
 
NC_008541  Arth_2263  carbamoyl phosphate synthase small subunit  65.03 
 
 
420 aa  500  1e-140  Arthrobacter sp. FB24  Bacteria  normal  0.181479  n/a   
 
 
-
 
NC_008578  Acel_1299  carbamoyl phosphate synthase small subunit  67.27 
 
 
395 aa  498  1e-140  Acidothermus cellulolyticus 11B  Bacteria  normal  0.161991  hitchhiker  0.00596115 
 
 
-
 
NC_011886  Achl_2000  carbamoyl phosphate synthase small subunit  61.78 
 
 
428 aa  498  1e-139  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000251671 
 
 
-
 
NC_013530  Xcel_1711  carbamoyl-phosphate synthase, small subunit  65 
 
 
413 aa  492  9.999999999999999e-139  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0172822  n/a   
 
 
-
 
NC_013521  Sked_17990  carbamoyl-phosphate synthase small subunit  64.87 
 
 
420 aa  494  9.999999999999999e-139  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2404  carbamoyl-phosphate synthase, small subunit  65.44 
 
 
392 aa  490  1e-137  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_3002  carbamoyl phosphate synthase small subunit  65.44 
 
 
397 aa  486  1e-136  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.541041 
 
 
-
 
NC_014151  Cfla_1845  carbamoyl-phosphate synthase, small subunit  66.67 
 
 
405 aa  484  1e-135  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.295776 
 
 
-
 
NC_013174  Jden_1322  carbamoyl-phosphate synthase, small subunit  61.67 
 
 
414 aa  479  1e-134  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.125881 
 
 
-
 
NC_013757  Gobs_3133  carbamoyl-phosphate synthase, small subunit  65.09 
 
 
388 aa  479  1e-134  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.266223  n/a   
 
 
-
 
NC_013595  Sros_2807  Carbamoyl-phosphate synthase (glutamine- hydrolyzing)  65.7 
 
 
400 aa  473  1e-132  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_2430  carbamoyl phosphate synthase small subunit  66.23 
 
 
378 aa  474  1e-132  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_3013  carbamoyl-phosphate synthase, small subunit  65.52 
 
 
377 aa  469  1.0000000000000001e-131  Thermomonospora curvata DSM 43183  Bacteria  normal  0.225095  n/a   
 
 
-
 
NC_012803  Mlut_12590  carbamoyl-phosphate synthase small subunit  62.75 
 
 
394 aa  466  9.999999999999999e-131  Micrococcus luteus NCTC 2665  Bacteria  normal  0.188848  n/a   
 
 
-
 
NC_013172  Bfae_14760  carbamoyl-phosphate synthase small subunit  59.26 
 
 
402 aa  467  9.999999999999999e-131  Brachybacterium faecium DSM 4810  Bacteria  normal  0.865636  n/a   
 
 
-
 
NC_013235  Namu_4276  carbamoyl-phosphate synthase, small subunit  60.81 
 
 
404 aa  463  1e-129  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.381159 
 
 
-
 
NC_013093  Amir_5242  carbamoyl-phosphate synthase, small subunit  63.35 
 
 
370 aa  460  9.999999999999999e-129  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_2366  carbamoyl phosphate synthase small subunit  61.84 
 
 
387 aa  460  9.999999999999999e-129  Mycobacterium sp. MCS  Bacteria  normal  0.122091  n/a   
 
 
-
 
NC_008705  Mkms_2413  carbamoyl phosphate synthase small subunit  61.84 
 
 
387 aa  460  9.999999999999999e-129  Mycobacterium sp. KMS  Bacteria  normal  normal  0.199018 
 
 
-
 
NC_009077  Mjls_2407  carbamoyl phosphate synthase small subunit  61.84 
 
 
387 aa  460  9.999999999999999e-129  Mycobacterium sp. JLS  Bacteria  normal  0.263156  normal 
 
 
-
 
NC_012669  Bcav_2037  carbamoyl-phosphate synthase, small subunit  64.63 
 
 
405 aa  456  1e-127  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.0185668 
 
 
-
 
NC_014165  Tbis_1354  carbamoyl-phosphate synthase small subunit  63.68 
 
 
372 aa  454  1.0000000000000001e-126  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0370749 
 
 
-
 
NC_013159  Svir_15580  carbamoyl-phosphate synthase small subunit  62.6 
 
 
378 aa  452  1.0000000000000001e-126  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_1855  carbamoyl-phosphate synthase, small subunit  61.24 
 
 
386 aa  449  1e-125  Salinispora tropica CNB-440  Bacteria  normal  0.459247  normal 
 
 
-
 
NC_009953  Sare_1848  carbamoyl-phosphate synthase, small subunit  60.41 
 
 
386 aa  447  1.0000000000000001e-124  Salinispora arenicola CNS-205  Bacteria  normal  0.293096  normal 
 
 
-
 
NC_014158  Tpau_2582  carbamoyl-phosphate synthase, small subunit  59.38 
 
 
378 aa  442  1e-123  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.659057  n/a   
 
 
-
 
NC_009921  Franean1_1709  carbamoyl phosphate synthase small subunit  61.04 
 
 
397 aa  443  1e-123  Frankia sp. EAN1pec  Bacteria  normal  0.0706412  normal  0.0202078 
 
 
-
 
NC_013721  HMPREF0424_0918  carbamoyl-phosphate synthase, small subunit  57.97 
 
 
403 aa  441  1e-123  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_010816  BLD_0084  carbamoyl phosphate synthase small subunit  56.93 
 
 
407 aa  439  9.999999999999999e-123  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_3199  carbamoyl phosphate synthase small subunit  56.95 
 
 
421 aa  438  9.999999999999999e-123  Frankia sp. CcI3  Bacteria  decreased coverage  0.00261776  normal 
 
 
-
 
NC_009338  Mflv_3744  carbamoyl phosphate synthase small subunit  58.1 
 
 
387 aa  437  1e-121  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.36566  normal  0.0290185 
 
 
-
 
NC_014210  Ndas_3103  carbamoyl-phosphate synthase, small subunit  60.62 
 
 
397 aa  433  1e-120  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.450122  normal 
 
 
-
 
NC_013441  Gbro_2339  carbamoyl-phosphate synthase, small subunit  59.27 
 
 
378 aa  431  1e-119  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_2663  carbamoyl phosphate synthase small subunit  57.55 
 
 
376 aa  431  1e-119  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_11412  carbamoyl phosphate synthase small subunit  58.9 
 
 
376 aa  426  1e-118  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.00978215  normal  0.266084 
 
 
-
 
NC_007333  Tfu_1056  carbamoyl-phosphate synthase small subunit  57.32 
 
 
416 aa  418  1e-116  Thermobifida fusca YX  Bacteria  normal  0.964387  n/a   
 
 
-
 
NC_013947  Snas_3152  carbamoyl-phosphate synthase small subunit  55.69 
 
 
412 aa  415  9.999999999999999e-116  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.322749  hitchhiker  0.000625968 
 
 
-
 
NC_009253  Dred_1683  carbamoyl-phosphate synthase, small subunit  50.66 
 
 
359 aa  352  8.999999999999999e-96  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000104913  n/a   
 
 
-
 
NC_007498  Pcar_1613  carbamoyl phosphate synthase small subunit  48.48 
 
 
376 aa  345  1e-93  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0266912  n/a   
 
 
-
 
NC_013216  Dtox_2353  carbamoyl-phosphate synthase, small subunit  48.53 
 
 
358 aa  343  2e-93  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.00528586  normal 
 
 
-
 
NC_008312  Tery_2310  carbamoyl phosphate synthase small subunit  45.84 
 
 
384 aa  342  9e-93  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.162276 
 
 
-
 
NC_008554  Sfum_0009  carbamoyl phosphate synthase small subunit  47.43 
 
 
391 aa  341  1e-92  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.35972  normal 
 
 
-
 
NC_009767  Rcas_3359  carbamoyl-phosphate synthase, small subunit  49.75 
 
 
386 aa  338  9.999999999999999e-92  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.663891  normal 
 
 
-
 
NC_007604  Synpcc7942_2122  carbamoyl phosphate synthase small subunit  48.72 
 
 
391 aa  336  5e-91  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.618886 
 
 
-
 
NC_009523  RoseRS_4055  carbamoyl-phosphate synthase, small subunit  49.49 
 
 
386 aa  334  2e-90  Roseiflexus sp. RS-1  Bacteria  normal  0.103191  normal 
 
 
-
 
NC_011729  PCC7424_3196  carbamoyl phosphate synthase small subunit  46.94 
 
 
379 aa  331  2e-89  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0368063 
 
 
-
 
NC_011726  PCC8801_0381  carbamoyl phosphate synthase small subunit  45.29 
 
 
380 aa  331  2e-89  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_0390  carbamoyl phosphate synthase small subunit  45.29 
 
 
380 aa  331  2e-89  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_2191  carbamoyl phosphate synthase small subunit  47.47 
 
 
372 aa  329  5.0000000000000004e-89  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.352304 
 
 
-
 
NC_014248  Aazo_2282  carbamoyl-phosphate synthase small subunit  45.61 
 
 
385 aa  328  8e-89  'Nostoc azollae' 0708  Bacteria  normal  0.332421  n/a   
 
 
-
 
NC_010513  Xfasm12_0451  carbamoyl phosphate synthase small subunit  46.41 
 
 
399 aa  327  3e-88  Xylella fastidiosa M12  Bacteria  normal  0.758109  n/a   
 
 
-
 
NC_007413  Ava_4410  carbamoyl phosphate synthase small subunit  45.68 
 
 
388 aa  326  6e-88  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.924948 
 
 
-
 
NC_008816  A9601_09091  carbamoyl phosphate synthase small subunit  43.44 
 
 
379 aa  324  2e-87  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.347132  n/a   
 
 
-
 
NC_010577  XfasM23_0392  carbamoyl phosphate synthase small subunit  46.15 
 
 
399 aa  324  2e-87  Xylella fastidiosa M23  Bacteria  normal  0.166847  n/a   
 
 
-
 
NC_010803  Clim_2299  carbamoyl phosphate synthase small subunit  46.13 
 
 
369 aa  324  2e-87  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.0000401664  n/a   
 
 
-
 
NC_007514  Cag_0107  carbamoyl phosphate synthase small subunit  45.97 
 
 
367 aa  324  2e-87  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1620  carbamoyl phosphate synthase small subunit  47.1 
 
 
373 aa  324  2e-87  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.394714  n/a   
 
 
-
 
NC_008009  Acid345_2194  carbamoyl-phosphate synthase small subunit  46.51 
 
 
373 aa  323  2e-87  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_2240  carbamoyl phosphate synthase small subunit  47.1 
 
 
373 aa  323  2e-87  Anaeromyxobacter sp. K  Bacteria  normal  0.513182  n/a   
 
 
-
 
NC_011884  Cyan7425_1942  carbamoyl phosphate synthase small subunit  45.09 
 
 
389 aa  323  2e-87  Cyanothece sp. PCC 7425  Bacteria  normal  0.230816  normal  0.202912 
 
 
-
 
NC_007577  PMT9312_0848  carbamoyl phosphate synthase small subunit  42.67 
 
 
379 aa  323  3e-87  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_0950  carbamoyl-phosphate synthase small subunit  44.03 
 
 
357 aa  322  7e-87  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0938  carbamoyl-phosphate synthase small subunit  47.07 
 
 
385 aa  322  7e-87  Dechloromonas aromatica RCB  Bacteria  normal  0.742428  normal 
 
 
-
 
NC_007912  Sde_2729  carbamoyl-phosphate synthase small subunit  46.35 
 
 
387 aa  322  7e-87  Saccharophagus degradans 2-40  Bacteria  normal  0.422158  normal 
 
 
-
 
NC_010717  PXO_00088  carbamoyl phosphate synthase small subunit  46.8 
 
 
390 aa  322  8e-87  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.562291  n/a   
 
 
-
 
NC_011891  A2cp1_2328  carbamoyl phosphate synthase small subunit  46.85 
 
 
373 aa  322  9.999999999999999e-87  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009091  P9301_09071  carbamoyl phosphate synthase small subunit  43.19 
 
 
379 aa  322  9.999999999999999e-87  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_008817  P9515_10341  carbamoyl phosphate synthase small subunit  43.44 
 
 
379 aa  321  1.9999999999999998e-86  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA1853  carbamoyl phosphate synthase small subunit  48.35 
 
 
378 aa  319  5e-86  Methylococcus capsulatus str. Bath  Bacteria  normal  0.0936768  n/a   
 
 
-
 
NC_008781  Pnap_1774  carbamoyl phosphate synthase small subunit  44.53 
 
 
393 aa  319  5e-86  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.0283036 
 
 
-
 
NC_008752  Aave_2610  carbamoyl-phosphate synthase, small subunit  45.27 
 
 
392 aa  319  6e-86  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.752092 
 
 
-
 
NC_007947  Mfla_0778  carbamoyl-phosphate synthase small subunit  45.76 
 
 
376 aa  319  7e-86  Methylobacillus flagellatus KT  Bacteria  normal  0.42563  hitchhiker  0.000147727 
 
 
-
 
NC_012034  Athe_1540  carbamoyl-phosphate synthase, small subunit  42.59 
 
 
356 aa  319  7e-86  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_2032  carbamoyl-phosphate synthase, small subunit  47.8 
 
 
383 aa  318  9e-86  Planctomyces limnophilus DSM 3776  Bacteria  unclonable  0.000000277554  n/a   
 
 
-
 
NC_007614  Nmul_A0478  carbamoyl-phosphate synthase, small subunit  46.13 
 
 
383 aa  318  1e-85  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_013203  Apar_0612  carbamoyl-phosphate synthase, small subunit  45.26 
 
 
417 aa  318  1e-85  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.348525 
 
 
-
 
NC_011071  Smal_1811  carbamoyl phosphate synthase small subunit  45.2 
 
 
393 aa  317  2e-85  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.0542874 
 
 
-
 
NC_009483  Gura_1858  carbamoyl phosphate synthase small subunit  46.17 
 
 
373 aa  317  3e-85  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A1968  carbamoyl phosphate synthase small subunit  45.09 
 
 
379 aa  316  4e-85  Vibrio cholerae O395  Bacteria  normal  0.837999  n/a   
 
 
-
 
NC_009943  Dole_0120  carbamoyl-phosphate synthase, small subunit  47.59 
 
 
380 aa  316  4e-85  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP0768  carbamoyl phosphate synthase small subunit  42.38 
 
 
366 aa  316  6e-85  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1303  carbamoyl-phosphate synthase, small subunit  47.76 
 
 
359 aa  315  7e-85  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0780078  n/a   
 
 
-
 
NC_008639  Cpha266_2459  carbamoyl phosphate synthase small subunit  44.07 
 
 
369 aa  315  7e-85  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.420642  n/a   
 
 
-
 
NC_007404  Tbd_1127  carbamoyl-phosphate synthase small subunit  47.95 
 
 
379 aa  315  9.999999999999999e-85  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.390679  normal 
 
 
-
 
NC_007517  Gmet_1771  carbamoyl phosphate synthase small subunit  45.04 
 
 
374 aa  315  9.999999999999999e-85  Geobacter metallireducens GS-15  Bacteria  normal  0.0224697  normal  0.089739 
 
 
-
 
NC_010483  TRQ2_0379  carbamoyl phosphate synthase small subunit  43.32 
 
 
392 aa  315  9.999999999999999e-85  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2940  carbamoyl phosphate synthase small subunit  44.72 
 
 
386 aa  314  9.999999999999999e-85  Shewanella putrefaciens CN-32  Bacteria  normal  0.185194  n/a   
 
 
-
 
NC_009486  Tpet_0362  carbamoyl phosphate synthase small subunit  43.32 
 
 
392 aa  315  9.999999999999999e-85  Thermotoga petrophila RKU-1  Bacteria  normal  0.0108123  n/a   
 
 
-
 
NC_011663  Sbal223_1051  carbamoyl phosphate synthase small subunit  44.31 
 
 
387 aa  314  1.9999999999999998e-84  Shewanella baltica OS223  Bacteria  normal  0.098868  hitchhiker  0.0000017806 
 
 
-
 
NC_007512  Plut_0156  carbamoyl phosphate synthase small subunit  44.65 
 
 
369 aa  314  1.9999999999999998e-84  Chlorobium luteolum DSM 273  Bacteria  normal  0.983052  normal  0.416855 
 
 
-
 
NC_011831  Cagg_2643  carbamoyl-phosphate synthase, small subunit  46.82 
 
 
374 aa  314  1.9999999999999998e-84  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2504  carbamoyl phosphate synthase small subunit  45.09 
 
 
381 aa  314  1.9999999999999998e-84  Shewanella amazonensis SB2B  Bacteria  normal  0.323519  normal 
 
 
-
 
NC_006348  BMA0770  carbamoyl phosphate synthase small subunit  45.94 
 
 
381 aa  313  2.9999999999999996e-84  Burkholderia mallei ATCC 23344  Bacteria  normal  0.76287  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1281  carbamoyl phosphate synthase small subunit  45.94 
 
 
381 aa  313  2.9999999999999996e-84  Burkholderia mallei SAVP1  Bacteria  normal  0.697849  n/a   
 
 
-
 
NC_008836  BMA10229_A0587  carbamoyl phosphate synthase small subunit  45.94 
 
 
381 aa  313  2.9999999999999996e-84  Burkholderia mallei NCTC 10229  Bacteria  normal  0.368687  n/a   
 
 
-
 
NC_009074  BURPS668_1475  carbamoyl phosphate synthase small subunit  45.94 
 
 
381 aa  313  2.9999999999999996e-84  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_004479  carbamoyl-phosphate synthase small chain  44.76 
 
 
379 aa  313  2.9999999999999996e-84  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_1505  carbamoyl phosphate synthase small subunit  45.94 
 
 
381 aa  313  2.9999999999999996e-84  Burkholderia pseudomallei 1106a  Bacteria  normal  0.188244  n/a   
 
 
-
 
NC_009080  BMA10247_0564  carbamoyl phosphate synthase small subunit  45.94 
 
 
381 aa  313  2.9999999999999996e-84  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
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