Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0392 |
Symbol | |
ID | 6202664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 484374 |
End bp | 485573 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641701926 |
Product | carbamoyl phosphate synthase small subunit |
Protein accession | YP_001829114 |
Protein GI | 182680954 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.166847 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTTGAGC TTTCCTGCAA CCTGATTTCA GGCGGCGGCA TCGGTGTCCC AGGCAGCCAG AGCGAGACTC AACCCGTGAC AGAACACGCA ATCCTAGTTC TCGAAGACGG TACCGTATTC GAGGGCGATG CTGTAGGCGC TAATGGGCTT TCCGTTGGTG AGGTGGTATT TAACACAGCC CTCACTGGTT ATCAGGAGAT CCTGACCGAT CCTTCGTATG CGTACCAATT GGTCACCCTG ACTTATCCGC ATATTGGCAA TACGGGTTGT ACCGATCAGG ATGATGAGGC GAATAAGGTA TGGGCGGCTG GGCTGATTGT GCGGGATGTG CCGCGTCGTC CAAGCAATTG GCGCAGTCAG ATTTCGTTGT CAGATTGGTT GGCCGCACGC GGTGTGGTTG CTATTGCTGG GATCGATACG CGCAAACTGA CCCGTATTCT TCGTGAGAAA GGCGCTCAGC ATGGTGCGTT GATGGCTGGT GAGATTGATG TTGGCAAGGC TCAGGATGCG GCTCATCAAT TTGCAGGTAT CAAAGGTATG GATTTAGCCA AAGTGGTCAG TACCAAACAG GGGTACTCTT GGTACGAAGG CCAGCTTGAT TTGGATCGTA ACGAATGCAA GCGCGCCGCG CCGCAATATA AGGTTGTGGC CTATGATTAC GGTGTGAAGC TGAATATTCT GCGGATGTTG GCGGAGCGTG GTTGTGATCT TACAGTGGTG CCTGCGCAGA CTCCGGCTGA CGAGGTGTTG GCGCTCTGCC CGGATGGGGT GTTTCTTTCC AATGGCCCAG GTGATCCAGA GCCTTGTGAT TATGCCGTTG CGGCGATTAA GACGTTCATC ATGCGACGGG TTCCAATCTT CGGTATTTGT TTGGGTCATC AATTGCTGGC CCAGGCTGTT GGTGCCAGGG TCGTCAAAAT GAGCCATGGT CACCATGGTG CGAATCATCC GGTGCAGGAC TTGCGCAGCG GGCGGGTAAT GATTACGTCG CAGAATCATG GCTTTGCTGT TGACGAGGCA ACGTTGCCAA ACAATGTCAG GGTGACGCAT CGTTCGTTGT TCGACGGGAC CAATCAGGGG ATTGAGTTGC TTGATGTGCC GGCATTCTCG TTTCAAGGGC ATCCGGAGGC TTCCCCTGGT CCGCACGATG TTGATGTGTT GTTTGACAGG TTCATTACAA TGATGGCGGC TCAATCCTGA
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Protein sequence | MFELSCNLIS GGGIGVPGSQ SETQPVTEHA ILVLEDGTVF EGDAVGANGL SVGEVVFNTA LTGYQEILTD PSYAYQLVTL TYPHIGNTGC TDQDDEANKV WAAGLIVRDV PRRPSNWRSQ ISLSDWLAAR GVVAIAGIDT RKLTRILREK GAQHGALMAG EIDVGKAQDA AHQFAGIKGM DLAKVVSTKQ GYSWYEGQLD LDRNECKRAA PQYKVVAYDY GVKLNILRML AERGCDLTVV PAQTPADEVL ALCPDGVFLS NGPGDPEPCD YAVAAIKTFI MRRVPIFGIC LGHQLLAQAV GARVVKMSHG HHGANHPVQD LRSGRVMITS QNHGFAVDEA TLPNNVRVTH RSLFDGTNQG IELLDVPAFS FQGHPEASPG PHDVDVLFDR FITMMAAQS
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