| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1056 |
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| Symbol | |
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| ID | 3579608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1233426 |
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| End bp | 1234676 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637684751 |
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| Product | carbamoyl-phosphate synthase small subunit |
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| Protein accession | YP_289117 |
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| Protein GI | 72161460 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.964387 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCACCA GTCACCACGC CCCAGCAGCC GTCCGCCTGC CCACCGCAGC AGCGGACGCC
CAGCGCCAGA GCGACCAGAC AACCACCATG CCCGCAGAGG GGAACAAGAA CGTGCAGGTA
CCCGCGATCC TGGTCCTGGA GGACGGCCGA GTCTTCCACG GGGTCTCCTT CGGTGCAGAA
GGGGAGACCT TCGGTGAAAT CGTGTTCCAC ACCGGAATGA CCGGATACCA GGAGGTCCTC
ACCGACCCCT CCTACCACCG CCAGATCGTG GTGATGACCG CACCGCACAT CGGCAACACG
GGGGTCAACG ACGACGACGC CGAATCCCAC CGGATCTGGG TGTCCGGATA CGTCGTCCGC
GAACCCTCCC GCATCGTCTC GAACTGGCGG GCCCAGCGCA CCCTCGAAGA GGAACTGCGC
CGCCAAGGAG TCGTCGGCAT CGCCCTCTCC GGCACCCGGG CGCTCACCCG CCACCTGCGC
GACAAGGGTG TGATGCGCGC CGCCATCAGC ACCGTGGAAA CCGACCCGGA CAAGCTGCGG
GAACGCGTCC TCGCCAGCCC GCAGATGGTC GGCGCGAACC TGGCCGGAGA GGTCACCACC
GCCGAGCCGT ACACGGTCCG CCCGCCGGAC GGCGTCCCCG TCCGCTTCAC CGTCGCAGCG
GTCGACCTCG GCATCAAAGC GATGACCCCG CAGCGGCTCG CCGAACGCGG CTGCGAAGTG
CGGGTGCTGC CTGCCCACAC CACGGCCGAG CAGATCCTCG CCCTCAACCC GGACGGCGTG
TTCTTCAGCA ACGGCCCCGG CGACCCTGCC GCCGCCGACG CCGTGGTGGA GACCATGCGC
GGCATCCTGG ACGCGGGCAC CCCGCTGCTC GGCATCTGCT TCGGCAACCA GATCCTGGGA
CGCGCCCTCG GCCTGGAGAC CTACAAGCTG CCCTTCGGCC ACCGCGGCGC CAACCACCCG
GTCCGCGAGA CCCGGACCGG GCGCGTCTAC ATCACCAGCC AGAACCACGG ATTCGCGGTC
CGCGCGCCCC TCGACGGCCC GTTCGACACT CCCTACGGCC GCGCCGAAGT GAGCTACATC
GGCCTCAACG ACGGCGTGGT GGAAGGACTG CGGCTGCTCG ACCGCCCCGC GCTCAGCACC
CAGTTCCACC CGGAGGCCGC CTCCGGGCCC CACGACGCCG CGGACGTGTT CGACACCTTC
GTGGAGATGA TGACCGCCCA CCGGCAGGCC CGCGAGGCCG CGCGCGCCTG A
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| Protein sequence | MSTSHHAPAA VRLPTAAADA QRQSDQTTTM PAEGNKNVQV PAILVLEDGR VFHGVSFGAE
GETFGEIVFH TGMTGYQEVL TDPSYHRQIV VMTAPHIGNT GVNDDDAESH RIWVSGYVVR
EPSRIVSNWR AQRTLEEELR RQGVVGIALS GTRALTRHLR DKGVMRAAIS TVETDPDKLR
ERVLASPQMV GANLAGEVTT AEPYTVRPPD GVPVRFTVAA VDLGIKAMTP QRLAERGCEV
RVLPAHTTAE QILALNPDGV FFSNGPGDPA AADAVVETMR GILDAGTPLL GICFGNQILG
RALGLETYKL PFGHRGANHP VRETRTGRVY ITSQNHGFAV RAPLDGPFDT PYGRAEVSYI
GLNDGVVEGL RLLDRPALST QFHPEAASGP HDAADVFDTF VEMMTAHRQA REAARA
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