More than 300 homologs were found in PanDaTox collection
for query gene Krad_3002 on replicon NC_009664
Organism: Kineococcus radiotolerans SRS30216



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009664  Krad_3002  carbamoyl phosphate synthase small subunit  100 
 
 
397 aa  803    Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.541041 
 
 
-
 
NC_008578  Acel_1299  carbamoyl phosphate synthase small subunit  70.74 
 
 
395 aa  538  9.999999999999999e-153  Acidothermus cellulolyticus 11B  Bacteria  normal  0.161991  hitchhiker  0.00596115 
 
 
-
 
NC_013131  Caci_2404  carbamoyl-phosphate synthase, small subunit  70.48 
 
 
392 aa  533  1e-150  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_1845  carbamoyl-phosphate synthase, small subunit  68.56 
 
 
405 aa  511  1e-144  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.295776 
 
 
-
 
NC_013093  Amir_5242  carbamoyl-phosphate synthase, small subunit  68.38 
 
 
370 aa  509  1e-143  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_17990  carbamoyl-phosphate synthase small subunit  67.19 
 
 
420 aa  510  1e-143  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_2430  carbamoyl phosphate synthase small subunit  70.67 
 
 
378 aa  508  1e-143  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_2807  Carbamoyl-phosphate synthase (glutamine- hydrolyzing)  67.21 
 
 
400 aa  500  1e-140  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1322  carbamoyl-phosphate synthase, small subunit  64.16 
 
 
414 aa  499  1e-140  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.125881 
 
 
-
 
NC_013757  Gobs_3133  carbamoyl-phosphate synthase, small subunit  65.86 
 
 
388 aa  497  1e-139  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.266223  n/a   
 
 
-
 
NC_008541  Arth_2263  carbamoyl phosphate synthase small subunit  62.44 
 
 
420 aa  496  1e-139  Arthrobacter sp. FB24  Bacteria  normal  0.181479  n/a   
 
 
-
 
NC_013530  Xcel_1711  carbamoyl-phosphate synthase, small subunit  65.71 
 
 
413 aa  493  9.999999999999999e-139  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0172822  n/a   
 
 
-
 
NC_014165  Tbis_1354  carbamoyl-phosphate synthase small subunit  66.4 
 
 
372 aa  494  9.999999999999999e-139  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0370749 
 
 
-
 
NC_011886  Achl_2000  carbamoyl phosphate synthase small subunit  64.29 
 
 
428 aa  489  1e-137  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000251671 
 
 
-
 
NC_014210  Ndas_3103  carbamoyl-phosphate synthase, small subunit  64.99 
 
 
397 aa  488  1e-136  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.450122  normal 
 
 
-
 
NC_013169  Ksed_12680  carbamoyl-phosphate synthase small subunit  65.44 
 
 
423 aa  486  1e-136  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.20639  normal  0.0925455 
 
 
-
 
NC_013159  Svir_15580  carbamoyl-phosphate synthase small subunit  63.44 
 
 
378 aa  475  1e-133  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_3013  carbamoyl-phosphate synthase, small subunit  63.49 
 
 
377 aa  476  1e-133  Thermomonospora curvata DSM 43183  Bacteria  normal  0.225095  n/a   
 
 
-
 
NC_009380  Strop_1855  carbamoyl-phosphate synthase, small subunit  65.18 
 
 
386 aa  477  1e-133  Salinispora tropica CNB-440  Bacteria  normal  0.459247  normal 
 
 
-
 
NC_009953  Sare_1848  carbamoyl-phosphate synthase, small subunit  64.4 
 
 
386 aa  471  1e-132  Salinispora arenicola CNS-205  Bacteria  normal  0.293096  normal 
 
 
-
 
NC_008146  Mmcs_2366  carbamoyl phosphate synthase small subunit  62.9 
 
 
387 aa  465  9.999999999999999e-131  Mycobacterium sp. MCS  Bacteria  normal  0.122091  n/a   
 
 
-
 
NC_008705  Mkms_2413  carbamoyl phosphate synthase small subunit  62.9 
 
 
387 aa  465  9.999999999999999e-131  Mycobacterium sp. KMS  Bacteria  normal  normal  0.199018 
 
 
-
 
NC_009921  Franean1_1709  carbamoyl phosphate synthase small subunit  63.61 
 
 
397 aa  462  1e-129  Frankia sp. EAN1pec  Bacteria  normal  0.0706412  normal  0.0202078 
 
 
-
 
NC_009077  Mjls_2407  carbamoyl phosphate synthase small subunit  62.63 
 
 
387 aa  463  1e-129  Mycobacterium sp. JLS  Bacteria  normal  0.263156  normal 
 
 
-
 
NC_013947  Snas_3152  carbamoyl-phosphate synthase small subunit  57.86 
 
 
412 aa  462  1e-129  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.322749  hitchhiker  0.000625968 
 
 
-
 
NC_012669  Bcav_2037  carbamoyl-phosphate synthase, small subunit  64.51 
 
 
405 aa  464  1e-129  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.0185668 
 
 
-
 
NC_010816  BLD_0084  carbamoyl phosphate synthase small subunit  58.99 
 
 
407 aa  460  9.999999999999999e-129  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_3744  carbamoyl phosphate synthase small subunit  59.68 
 
 
387 aa  452  1.0000000000000001e-126  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.36566  normal  0.0290185 
 
 
-
 
NC_008726  Mvan_2663  carbamoyl phosphate synthase small subunit  60.05 
 
 
376 aa  452  1.0000000000000001e-126  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013721  HMPREF0424_0918  carbamoyl-phosphate synthase, small subunit  59.07 
 
 
403 aa  448  1e-125  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_013235  Namu_4276  carbamoyl-phosphate synthase, small subunit  58.96 
 
 
404 aa  445  1.0000000000000001e-124  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.381159 
 
 
-
 
NC_007333  Tfu_1056  carbamoyl-phosphate synthase small subunit  59.15 
 
 
416 aa  445  1.0000000000000001e-124  Thermobifida fusca YX  Bacteria  normal  0.964387  n/a   
 
 
-
 
NC_014158  Tpau_2582  carbamoyl-phosphate synthase, small subunit  61.02 
 
 
378 aa  446  1.0000000000000001e-124  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.659057  n/a   
 
 
-
 
NC_007777  Francci3_3199  carbamoyl phosphate synthase small subunit  59.6 
 
 
421 aa  440  9.999999999999999e-123  Frankia sp. CcI3  Bacteria  decreased coverage  0.00261776  normal 
 
 
-
 
NC_013441  Gbro_2339  carbamoyl-phosphate synthase, small subunit  59.52 
 
 
378 aa  440  9.999999999999999e-123  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_12590  carbamoyl-phosphate synthase small subunit  59.38 
 
 
394 aa  435  1e-121  Micrococcus luteus NCTC 2665  Bacteria  normal  0.188848  n/a   
 
 
-
 
NC_009565  TBFG_11412  carbamoyl phosphate synthase small subunit  59.31 
 
 
376 aa  431  1e-119  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.00978215  normal  0.266084 
 
 
-
 
NC_013172  Bfae_14760  carbamoyl-phosphate synthase small subunit  57.45 
 
 
402 aa  429  1e-119  Brachybacterium faecium DSM 4810  Bacteria  normal  0.865636  n/a   
 
 
-
 
NC_009767  Rcas_3359  carbamoyl-phosphate synthase, small subunit  51.41 
 
 
386 aa  353  2e-96  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.663891  normal 
 
 
-
 
NC_009523  RoseRS_4055  carbamoyl-phosphate synthase, small subunit  51.03 
 
 
386 aa  350  2e-95  Roseiflexus sp. RS-1  Bacteria  normal  0.103191  normal 
 
 
-
 
NC_009675  Anae109_2191  carbamoyl phosphate synthase small subunit  49.61 
 
 
372 aa  337  1.9999999999999998e-91  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.352304 
 
 
-
 
NC_014248  Aazo_2282  carbamoyl-phosphate synthase small subunit  46.74 
 
 
385 aa  333  2e-90  'Nostoc azollae' 0708  Bacteria  normal  0.332421  n/a   
 
 
-
 
NC_008312  Tery_2310  carbamoyl phosphate synthase small subunit  46.91 
 
 
384 aa  332  5e-90  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.162276 
 
 
-
 
NC_007947  Mfla_0778  carbamoyl-phosphate synthase small subunit  46.48 
 
 
376 aa  332  9e-90  Methylobacillus flagellatus KT  Bacteria  normal  0.42563  hitchhiker  0.000147727 
 
 
-
 
NC_011729  PCC7424_3196  carbamoyl phosphate synthase small subunit  47 
 
 
379 aa  331  1e-89  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0368063 
 
 
-
 
NC_011071  Smal_1811  carbamoyl phosphate synthase small subunit  47.66 
 
 
393 aa  331  2e-89  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.0542874 
 
 
-
 
NC_011831  Cagg_2643  carbamoyl-phosphate synthase, small subunit  49.09 
 
 
374 aa  330  3e-89  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_1613  carbamoyl phosphate synthase small subunit  46.13 
 
 
376 aa  328  8e-89  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0266912  n/a   
 
 
-
 
NC_013385  Adeg_0372  carbamoyl-phosphate synthase, small subunit  49.32 
 
 
359 aa  328  1.0000000000000001e-88  Ammonifex degensii KC4  Bacteria  normal  0.386907  n/a   
 
 
-
 
NC_010717  PXO_00088  carbamoyl phosphate synthase small subunit  46.86 
 
 
390 aa  328  1.0000000000000001e-88  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.562291  n/a   
 
 
-
 
NC_009486  Tpet_0362  carbamoyl phosphate synthase small subunit  45.57 
 
 
392 aa  327  2.0000000000000001e-88  Thermotoga petrophila RKU-1  Bacteria  normal  0.0108123  n/a   
 
 
-
 
NC_007298  Daro_0938  carbamoyl-phosphate synthase small subunit  46.72 
 
 
385 aa  327  3e-88  Dechloromonas aromatica RCB  Bacteria  normal  0.742428  normal 
 
 
-
 
NC_010483  TRQ2_0379  carbamoyl phosphate synthase small subunit  45.57 
 
 
392 aa  327  3e-88  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2240  carbamoyl phosphate synthase small subunit  48.83 
 
 
373 aa  327  3e-88  Anaeromyxobacter sp. K  Bacteria  normal  0.513182  n/a   
 
 
-
 
NC_011884  Cyan7425_1942  carbamoyl phosphate synthase small subunit  46.61 
 
 
389 aa  326  4.0000000000000003e-88  Cyanothece sp. PCC 7425  Bacteria  normal  0.230816  normal  0.202912 
 
 
-
 
NC_011891  A2cp1_2328  carbamoyl phosphate synthase small subunit  48.56 
 
 
373 aa  325  9e-88  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0975  carbamoyl-phosphate synthase, small subunit  46.48 
 
 
379 aa  325  1e-87  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0698  carbamoyl-phosphate synthase, small subunit  46.75 
 
 
377 aa  325  1e-87  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.110228 
 
 
-
 
NC_009976  P9211_06931  carbamoyl phosphate synthase small subunit  45.17 
 
 
380 aa  324  2e-87  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  0.0298336  normal  0.187512 
 
 
-
 
NC_008740  Maqu_3359  carbamoyl-phosphate synthase, small subunit  45.88 
 
 
381 aa  323  2e-87  Marinobacter aquaeolei VT8  Bacteria  normal  0.365692  n/a   
 
 
-
 
NC_007413  Ava_4410  carbamoyl phosphate synthase small subunit  46.65 
 
 
388 aa  323  3e-87  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.924948 
 
 
-
 
NC_009253  Dred_1683  carbamoyl-phosphate synthase, small subunit  45.78 
 
 
359 aa  323  4e-87  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000104913  n/a   
 
 
-
 
NC_007512  Plut_0156  carbamoyl phosphate synthase small subunit  45.6 
 
 
369 aa  323  4e-87  Chlorobium luteolum DSM 273  Bacteria  normal  0.983052  normal  0.416855 
 
 
-
 
NC_007760  Adeh_1620  carbamoyl phosphate synthase small subunit  49.09 
 
 
373 aa  322  5e-87  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.394714  n/a   
 
 
-
 
NC_002939  GSU1273  carbamoyl phosphate synthase small subunit  46.15 
 
 
374 aa  322  6e-87  Geobacter sulfurreducens PCA  Bacteria  normal  0.0567002  n/a   
 
 
-
 
NC_007604  Synpcc7942_2122  carbamoyl phosphate synthase small subunit  46.21 
 
 
391 aa  322  6e-87  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.618886 
 
 
-
 
NC_007614  Nmul_A0478  carbamoyl-phosphate synthase, small subunit  45.69 
 
 
383 aa  322  6e-87  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_0120  carbamoyl-phosphate synthase, small subunit  46.95 
 
 
380 aa  322  9.000000000000001e-87  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0009  carbamoyl phosphate synthase small subunit  45.34 
 
 
391 aa  321  9.999999999999999e-87  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.35972  normal 
 
 
-
 
NC_012034  Athe_1540  carbamoyl-phosphate synthase, small subunit  43.43 
 
 
356 aa  320  1.9999999999999998e-86  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1858  carbamoyl phosphate synthase small subunit  46.88 
 
 
373 aa  320  3.9999999999999996e-86  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_2353  carbamoyl-phosphate synthase, small subunit  46.17 
 
 
358 aa  320  3.9999999999999996e-86  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.00528586  normal 
 
 
-
 
NC_010513  Xfasm12_0451  carbamoyl phosphate synthase small subunit  44.76 
 
 
399 aa  319  5e-86  Xylella fastidiosa M12  Bacteria  normal  0.758109  n/a   
 
 
-
 
NC_011138  MADE_02244  carbamoyl-phosphate synthase small subunit  44.24 
 
 
440 aa  319  5e-86  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.0231375  n/a   
 
 
-
 
NC_011726  PCC8801_0381  carbamoyl phosphate synthase small subunit  45.83 
 
 
380 aa  319  6e-86  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_0390  carbamoyl phosphate synthase small subunit  45.83 
 
 
380 aa  319  6e-86  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_1771  carbamoyl phosphate synthase small subunit  45.97 
 
 
374 aa  318  7.999999999999999e-86  Geobacter metallireducens GS-15  Bacteria  normal  0.0224697  normal  0.089739 
 
 
-
 
NC_010577  XfasM23_0392  carbamoyl phosphate synthase small subunit  44.62 
 
 
399 aa  318  1e-85  Xylella fastidiosa M23  Bacteria  normal  0.166847  n/a   
 
 
-
 
NC_011830  Dhaf_3203  carbamoyl-phosphate synthase, small subunit  46.52 
 
 
368 aa  318  1e-85  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_2349  carbamoyl phosphate synthase small subunit  43.39 
 
 
366 aa  318  1e-85  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_008816  A9601_09091  carbamoyl phosphate synthase small subunit  42.04 
 
 
379 aa  318  1e-85  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.347132  n/a   
 
 
-
 
NC_010803  Clim_2299  carbamoyl phosphate synthase small subunit  45.07 
 
 
369 aa  317  2e-85  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.0000401664  n/a   
 
 
-
 
NC_008009  Acid345_2194  carbamoyl-phosphate synthase small subunit  45.12 
 
 
373 aa  317  2e-85  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_008817  P9515_10341  carbamoyl phosphate synthase small subunit  43.12 
 
 
379 aa  317  2e-85  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_2032  carbamoyl-phosphate synthase, small subunit  45.88 
 
 
383 aa  317  3e-85  Planctomyces limnophilus DSM 3776  Bacteria  unclonable  0.000000277554  n/a   
 
 
-
 
NC_008639  Cpha266_2459  carbamoyl phosphate synthase small subunit  44.06 
 
 
369 aa  317  3e-85  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.420642  n/a   
 
 
-
 
NC_007510  Bcep18194_A4432  carbamoyl phosphate synthase small subunit  44.04 
 
 
380 aa  316  4e-85  Burkholderia sp. 383  Bacteria  hitchhiker  0.00120805  normal 
 
 
-
 
NC_004578  PSPTO_4502  carbamoyl-phosphate synthase, small subunit  46.11 
 
 
378 aa  316  5e-85  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.723109  n/a   
 
 
-
 
NC_011060  Ppha_0218  carbamoyl phosphate synthase small subunit  43.77 
 
 
367 aa  315  7e-85  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010730  SYO3AOP1_1361  carbamoyl phosphate synthase small subunit  42.49 
 
 
376 aa  315  7e-85  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I2783  carbamoyl phosphate synthase small subunit  44.04 
 
 
381 aa  315  8e-85  Burkholderia thailandensis E264  Bacteria  normal  0.259596  n/a   
 
 
-
 
NC_007912  Sde_2729  carbamoyl-phosphate synthase small subunit  44.39 
 
 
387 aa  315  9.999999999999999e-85  Saccharophagus degradans 2-40  Bacteria  normal  0.422158  normal 
 
 
-
 
NC_013037  Dfer_4372  carbamoyl phosphate synthase small subunit  44.56 
 
 
368 aa  315  9.999999999999999e-85  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_1916  carbamoyl phosphate synthase small subunit  47.28 
 
 
364 aa  314  9.999999999999999e-85  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009656  PSPA7_5478  carbamoyl phosphate synthase small subunit  45.22 
 
 
378 aa  314  1.9999999999999998e-84  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_1261  carbamoyl phosphate synthase small subunit  43.52 
 
 
380 aa  313  1.9999999999999998e-84  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0131767  normal  0.191599 
 
 
-
 
NC_009076  BURPS1106A_1505  carbamoyl phosphate synthase small subunit  43.78 
 
 
381 aa  314  1.9999999999999998e-84  Burkholderia pseudomallei 1106a  Bacteria  normal  0.188244  n/a   
 
 
-
 
NC_008576  Mmc1_3019  carbamoyl-phosphate synthase small subunit  45.03 
 
 
377 aa  314  1.9999999999999998e-84  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_2310  carbamoyl phosphate synthase small subunit  45.57 
 
 
374 aa  313  2.9999999999999996e-84  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007434  BURPS1710b_1608  carbamoyl phosphate synthase small subunit  43.78 
 
 
381 aa  313  2.9999999999999996e-84  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
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