More than 300 homologs were found in PanDaTox collection
for query gene Tbis_1354 on replicon NC_014165
Organism: Thermobispora bispora DSM 43833



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014165  Tbis_1354  carbamoyl-phosphate synthase small subunit  100 
 
 
372 aa  753    Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0370749 
 
 
-
 
NC_013595  Sros_2807  Carbamoyl-phosphate synthase (glutamine- hydrolyzing)  82.02 
 
 
400 aa  616  1e-175  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_3013  carbamoyl-phosphate synthase, small subunit  76.92 
 
 
377 aa  562  1.0000000000000001e-159  Thermomonospora curvata DSM 43183  Bacteria  normal  0.225095  n/a   
 
 
-
 
NC_014210  Ndas_3103  carbamoyl-phosphate synthase, small subunit  72.88 
 
 
397 aa  524  1e-147  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.450122  normal 
 
 
-
 
NC_007333  Tfu_1056  carbamoyl-phosphate synthase small subunit  68.92 
 
 
416 aa  509  1e-143  Thermobifida fusca YX  Bacteria  normal  0.964387  n/a   
 
 
-
 
NC_013757  Gobs_3133  carbamoyl-phosphate synthase, small subunit  69.38 
 
 
388 aa  502  1e-141  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.266223  n/a   
 
 
-
 
NC_008578  Acel_1299  carbamoyl phosphate synthase small subunit  69.13 
 
 
395 aa  498  1e-140  Acidothermus cellulolyticus 11B  Bacteria  normal  0.161991  hitchhiker  0.00596115 
 
 
-
 
NC_009664  Krad_3002  carbamoyl phosphate synthase small subunit  66.4 
 
 
397 aa  494  1e-139  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.541041 
 
 
-
 
NC_010816  BLD_0084  carbamoyl phosphate synthase small subunit  61.92 
 
 
407 aa  486  1e-136  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2404  carbamoyl-phosphate synthase, small subunit  66.21 
 
 
392 aa  484  1e-136  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_1709  carbamoyl phosphate synthase small subunit  67.3 
 
 
397 aa  483  1e-135  Frankia sp. EAN1pec  Bacteria  normal  0.0706412  normal  0.0202078 
 
 
-
 
NC_008699  Noca_2430  carbamoyl phosphate synthase small subunit  68.01 
 
 
378 aa  484  1e-135  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_15580  carbamoyl-phosphate synthase small subunit  66.21 
 
 
378 aa  481  1e-134  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_2366  carbamoyl phosphate synthase small subunit  66.3 
 
 
387 aa  475  1e-133  Mycobacterium sp. MCS  Bacteria  normal  0.122091  n/a   
 
 
-
 
NC_008705  Mkms_2413  carbamoyl phosphate synthase small subunit  66.3 
 
 
387 aa  475  1e-133  Mycobacterium sp. KMS  Bacteria  normal  normal  0.199018 
 
 
-
 
NC_009077  Mjls_2407  carbamoyl phosphate synthase small subunit  66.03 
 
 
387 aa  474  1e-132  Mycobacterium sp. JLS  Bacteria  normal  0.263156  normal 
 
 
-
 
NC_014151  Cfla_1845  carbamoyl-phosphate synthase, small subunit  66.49 
 
 
405 aa  471  1e-132  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.295776 
 
 
-
 
NC_013521  Sked_17990  carbamoyl-phosphate synthase small subunit  64.29 
 
 
420 aa  473  1e-132  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1322  carbamoyl-phosphate synthase, small subunit  61.78 
 
 
414 aa  468  9.999999999999999e-131  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.125881 
 
 
-
 
NC_009338  Mflv_3744  carbamoyl phosphate synthase small subunit  64.5 
 
 
387 aa  465  9.999999999999999e-131  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.36566  normal  0.0290185 
 
 
-
 
NC_008726  Mvan_2663  carbamoyl phosphate synthase small subunit  65.3 
 
 
376 aa  464  9.999999999999999e-131  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_1855  carbamoyl-phosphate synthase, small subunit  63.98 
 
 
386 aa  462  1e-129  Salinispora tropica CNB-440  Bacteria  normal  0.459247  normal 
 
 
-
 
NC_009953  Sare_1848  carbamoyl-phosphate synthase, small subunit  64.34 
 
 
386 aa  462  1e-129  Salinispora arenicola CNS-205  Bacteria  normal  0.293096  normal 
 
 
-
 
NC_013093  Amir_5242  carbamoyl-phosphate synthase, small subunit  63.39 
 
 
370 aa  463  1e-129  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_11412  carbamoyl phosphate synthase small subunit  64.13 
 
 
376 aa  460  9.999999999999999e-129  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.00978215  normal  0.266084 
 
 
-
 
NC_011886  Achl_2000  carbamoyl phosphate synthase small subunit  62.8 
 
 
428 aa  460  9.999999999999999e-129  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000251671 
 
 
-
 
NC_007777  Francci3_3199  carbamoyl phosphate synthase small subunit  60.91 
 
 
421 aa  455  1e-127  Frankia sp. CcI3  Bacteria  decreased coverage  0.00261776  normal 
 
 
-
 
NC_008541  Arth_2263  carbamoyl phosphate synthase small subunit  62.37 
 
 
420 aa  457  1e-127  Arthrobacter sp. FB24  Bacteria  normal  0.181479  n/a   
 
 
-
 
NC_013721  HMPREF0424_0918  carbamoyl-phosphate synthase, small subunit  58.22 
 
 
403 aa  452  1.0000000000000001e-126  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_013169  Ksed_12680  carbamoyl-phosphate synthase small subunit  63.68 
 
 
423 aa  454  1.0000000000000001e-126  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.20639  normal  0.0925455 
 
 
-
 
NC_013947  Snas_3152  carbamoyl-phosphate synthase small subunit  60.2 
 
 
412 aa  454  1.0000000000000001e-126  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.322749  hitchhiker  0.000625968 
 
 
-
 
NC_012669  Bcav_2037  carbamoyl-phosphate synthase, small subunit  63.06 
 
 
405 aa  451  1e-125  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.0185668 
 
 
-
 
NC_013530  Xcel_1711  carbamoyl-phosphate synthase, small subunit  61.98 
 
 
413 aa  451  1e-125  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0172822  n/a   
 
 
-
 
NC_013441  Gbro_2339  carbamoyl-phosphate synthase, small subunit  62.13 
 
 
378 aa  449  1e-125  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_2582  carbamoyl-phosphate synthase, small subunit  60.82 
 
 
378 aa  447  1.0000000000000001e-124  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.659057  n/a   
 
 
-
 
NC_013172  Bfae_14760  carbamoyl-phosphate synthase small subunit  61.41 
 
 
402 aa  446  1.0000000000000001e-124  Brachybacterium faecium DSM 4810  Bacteria  normal  0.865636  n/a   
 
 
-
 
NC_012803  Mlut_12590  carbamoyl-phosphate synthase small subunit  61.5 
 
 
394 aa  429  1e-119  Micrococcus luteus NCTC 2665  Bacteria  normal  0.188848  n/a   
 
 
-
 
NC_013235  Namu_4276  carbamoyl-phosphate synthase, small subunit  59.37 
 
 
404 aa  431  1e-119  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.381159 
 
 
-
 
NC_009523  RoseRS_4055  carbamoyl-phosphate synthase, small subunit  56.2 
 
 
386 aa  385  1e-106  Roseiflexus sp. RS-1  Bacteria  normal  0.103191  normal 
 
 
-
 
NC_009767  Rcas_3359  carbamoyl-phosphate synthase, small subunit  56.2 
 
 
386 aa  387  1e-106  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.663891  normal 
 
 
-
 
NC_009253  Dred_1683  carbamoyl-phosphate synthase, small subunit  53.41 
 
 
359 aa  372  1e-102  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000104913  n/a   
 
 
-
 
NC_007498  Pcar_1613  carbamoyl phosphate synthase small subunit  51.05 
 
 
376 aa  367  1e-100  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0266912  n/a   
 
 
-
 
NC_011831  Cagg_2643  carbamoyl-phosphate synthase, small subunit  52.38 
 
 
374 aa  360  3e-98  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_010803  Clim_2299  carbamoyl phosphate synthase small subunit  49.87 
 
 
369 aa  356  2.9999999999999997e-97  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.0000401664  n/a   
 
 
-
 
NC_007510  Bcep18194_A4432  carbamoyl phosphate synthase small subunit  50.4 
 
 
380 aa  355  7.999999999999999e-97  Burkholderia sp. 383  Bacteria  hitchhiker  0.00120805  normal 
 
 
-
 
NC_008312  Tery_2310  carbamoyl phosphate synthase small subunit  49.47 
 
 
384 aa  354  1e-96  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.162276 
 
 
-
 
NC_013385  Adeg_0372  carbamoyl-phosphate synthase, small subunit  52.45 
 
 
359 aa  353  2e-96  Ammonifex degensii KC4  Bacteria  normal  0.386907  n/a   
 
 
-
 
NC_007512  Plut_0156  carbamoyl phosphate synthase small subunit  48.79 
 
 
369 aa  353  2e-96  Chlorobium luteolum DSM 273  Bacteria  normal  0.983052  normal  0.416855 
 
 
-
 
NC_008554  Sfum_0009  carbamoyl phosphate synthase small subunit  49.74 
 
 
391 aa  353  2e-96  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.35972  normal 
 
 
-
 
NC_010531  Pnec_0848  carbamoyl-phosphate synthase, small subunit  49.23 
 
 
398 aa  353  2.9999999999999997e-96  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal  0.287672 
 
 
-
 
NC_009076  BURPS1106A_1505  carbamoyl phosphate synthase small subunit  50.67 
 
 
381 aa  352  5.9999999999999994e-96  Burkholderia pseudomallei 1106a  Bacteria  normal  0.188244  n/a   
 
 
-
 
NC_007434  BURPS1710b_1608  carbamoyl phosphate synthase small subunit  50.67 
 
 
381 aa  352  7e-96  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_0218  carbamoyl phosphate synthase small subunit  48.24 
 
 
367 aa  352  7e-96  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_1261  carbamoyl phosphate synthase small subunit  49.87 
 
 
380 aa  352  8e-96  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0131767  normal  0.191599 
 
 
-
 
NC_011138  MADE_02244  carbamoyl-phosphate synthase small subunit  47.66 
 
 
440 aa  352  8e-96  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.0231375  n/a   
 
 
-
 
NC_009379  Pnuc_1019  carbamoyl-phosphate synthase, small subunit  49.23 
 
 
397 aa  351  1e-95  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA0770  carbamoyl phosphate synthase small subunit  50.4 
 
 
381 aa  351  1e-95  Burkholderia mallei ATCC 23344  Bacteria  normal  0.76287  n/a   
 
 
-
 
NC_009074  BURPS668_1475  carbamoyl phosphate synthase small subunit  50.4 
 
 
381 aa  351  1e-95  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A0587  carbamoyl phosphate synthase small subunit  50.4 
 
 
381 aa  351  1e-95  Burkholderia mallei NCTC 10229  Bacteria  normal  0.368687  n/a   
 
 
-
 
NC_009080  BMA10247_0564  carbamoyl phosphate synthase small subunit  50.4 
 
 
381 aa  351  1e-95  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1281  carbamoyl phosphate synthase small subunit  50.4 
 
 
381 aa  351  1e-95  Burkholderia mallei SAVP1  Bacteria  normal  0.697849  n/a   
 
 
-
 
NC_008060  Bcen_0809  carbamoyl phosphate synthase small subunit  49.87 
 
 
380 aa  350  2e-95  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_1290  carbamoyl phosphate synthase small subunit  49.87 
 
 
380 aa  350  2e-95  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0948613  n/a   
 
 
-
 
NC_011901  Tgr7_0975  carbamoyl-phosphate synthase, small subunit  50.8 
 
 
379 aa  350  2e-95  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I2783  carbamoyl phosphate synthase small subunit  50.4 
 
 
381 aa  349  3e-95  Burkholderia thailandensis E264  Bacteria  normal  0.259596  n/a   
 
 
-
 
NC_007947  Mfla_0778  carbamoyl-phosphate synthase small subunit  49.61 
 
 
376 aa  350  3e-95  Methylobacillus flagellatus KT  Bacteria  normal  0.42563  hitchhiker  0.000147727 
 
 
-
 
NC_004347  SO_1141  carbamoyl phosphate synthase small subunit  49.48 
 
 
386 aa  348  6e-95  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008639  Cpha266_2459  carbamoyl phosphate synthase small subunit  48.26 
 
 
369 aa  348  7e-95  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.420642  n/a   
 
 
-
 
NC_011059  Paes_2113  carbamoyl phosphate synthase small subunit  47.2 
 
 
371 aa  348  1e-94  Prosthecochloris aestuarii DSM 271  Bacteria  unclonable  0.000000000982338  normal  0.988223 
 
 
-
 
NC_008781  Pnap_1774  carbamoyl phosphate synthase small subunit  46.89 
 
 
393 aa  348  1e-94  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.0283036 
 
 
-
 
NC_010831  Cphamn1_2349  carbamoyl phosphate synthase small subunit  49.32 
 
 
366 aa  347  2e-94  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_3196  carbamoyl phosphate synthase small subunit  48.68 
 
 
379 aa  347  2e-94  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0368063 
 
 
-
 
NC_009943  Dole_0120  carbamoyl-phosphate synthase, small subunit  51.69 
 
 
380 aa  347  2e-94  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2940  carbamoyl phosphate synthase small subunit  48.97 
 
 
386 aa  347  2e-94  Shewanella putrefaciens CN-32  Bacteria  normal  0.185194  n/a   
 
 
-
 
NC_013216  Dtox_2353  carbamoyl-phosphate synthase, small subunit  48.23 
 
 
358 aa  347  2e-94  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.00528586  normal 
 
 
-
 
NC_008321  Shewmr4_0965  carbamoyl phosphate synthase small subunit  49.23 
 
 
386 aa  347  2e-94  Shewanella sp. MR-4  Bacteria  normal  0.0738044  normal 
 
 
-
 
NC_008700  Sama_2504  carbamoyl phosphate synthase small subunit  49.21 
 
 
381 aa  347  2e-94  Shewanella amazonensis SB2B  Bacteria  normal  0.323519  normal 
 
 
-
 
NC_008752  Aave_2610  carbamoyl-phosphate synthase, small subunit  49.08 
 
 
392 aa  347  2e-94  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.752092 
 
 
-
 
NC_007614  Nmul_A0478  carbamoyl-phosphate synthase, small subunit  49.48 
 
 
383 aa  346  4e-94  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1273  carbamoyl phosphate synthase small subunit  49.08 
 
 
374 aa  345  5e-94  Geobacter sulfurreducens PCA  Bacteria  normal  0.0567002  n/a   
 
 
-
 
NC_011071  Smal_1811  carbamoyl phosphate synthase small subunit  49.21 
 
 
393 aa  345  6e-94  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.0542874 
 
 
-
 
NC_008322  Shewmr7_1003  carbamoyl phosphate synthase small subunit  48.97 
 
 
386 aa  345  7e-94  Shewanella sp. MR-7  Bacteria  normal  0.0354323  normal 
 
 
-
 
NC_008009  Acid345_2194  carbamoyl-phosphate synthase small subunit  48.15 
 
 
373 aa  345  8e-94  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_2215  carbamoyl-phosphate synthase, small subunit  47.52 
 
 
381 aa  345  8e-94  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.000311671  n/a   
 
 
-
 
NC_010483  TRQ2_0379  carbamoyl phosphate synthase small subunit  49.49 
 
 
392 aa  344  1e-93  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0362  carbamoyl phosphate synthase small subunit  49.49 
 
 
392 aa  344  1e-93  Thermotoga petrophila RKU-1  Bacteria  normal  0.0108123  n/a   
 
 
-
 
NC_014148  Plim_2032  carbamoyl-phosphate synthase, small subunit  48.81 
 
 
383 aa  344  1e-93  Planctomyces limnophilus DSM 3776  Bacteria  unclonable  0.000000277554  n/a   
 
 
-
 
NC_007604  Synpcc7942_2122  carbamoyl phosphate synthase small subunit  51.6 
 
 
391 aa  345  1e-93  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.618886 
 
 
-
 
NC_008577  Shewana3_0967  carbamoyl phosphate synthase small subunit  48.72 
 
 
386 aa  344  1e-93  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00370508  normal 
 
 
-
 
NC_014248  Aazo_2282  carbamoyl-phosphate synthase small subunit  48.3 
 
 
385 aa  344  2e-93  'Nostoc azollae' 0708  Bacteria  normal  0.332421  n/a   
 
 
-
 
NC_010622  Bphy_0873  carbamoyl phosphate synthase small subunit  50.52 
 
 
384 aa  343  2e-93  Burkholderia phymatum STM815  Bacteria  normal  0.644445  normal  0.264285 
 
 
-
 
NC_010682  Rpic_2036  carbamoyl phosphate synthase small subunit  49.34 
 
 
378 aa  343  2.9999999999999997e-93  Ralstonia pickettii 12J  Bacteria  normal  0.534876  normal 
 
 
-
 
NC_007514  Cag_0107  carbamoyl phosphate synthase small subunit  48.67 
 
 
367 aa  343  2.9999999999999997e-93  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_0390  carbamoyl phosphate synthase small subunit  49.21 
 
 
380 aa  343  2.9999999999999997e-93  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_0381  carbamoyl phosphate synthase small subunit  49.21 
 
 
380 aa  343  2.9999999999999997e-93  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009997  Sbal195_3526  carbamoyl phosphate synthase small subunit  48.33 
 
 
386 aa  343  4e-93  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_1148  carbamoyl-phosphate synthase, small subunit  48.82 
 
 
387 aa  343  4e-93  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0863472  normal 
 
 
-
 
NC_010084  Bmul_2030  carbamoyl phosphate synthase small subunit  49.87 
 
 
380 aa  342  5e-93  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.115427  normal 
 
 
-
 
NC_011884  Cyan7425_1942  carbamoyl phosphate synthase small subunit  47.91 
 
 
389 aa  342  7e-93  Cyanothece sp. PCC 7425  Bacteria  normal  0.230816  normal  0.202912 
 
 
-
 
NC_013456  VEA_004479  carbamoyl-phosphate synthase small chain  48.42 
 
 
379 aa  342  8e-93  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
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