| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0967 |
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| Symbol | |
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| ID | 4478893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1134216 |
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| End bp | 1135376 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639725500 |
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| Product | carbamoyl phosphate synthase small subunit |
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| Protein accession | YP_868608 |
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| Protein GI | 117919416 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00370508 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGGTCG CGTTGACAAA GTCTGCCTTA CTCGTACTCG AAGATGGAAC CGTATTCACT
GGCACAGCAA TTGGTGCCGA TGGTCTCTCT GTTGGTGAAG TTGTTTTTAA CACTTCCATG
ACAGGATACC AAGAAATTTT AACTGATCCC TCTTATTCAC GCCAAATAGT AACTTTAACC
TACCCCCACA TTGGTAACAC TGGTACCAAT AATGAAGACG TCGAATCCAA TGGGGTTCAT
GCTTGTGGTT TAATCATTCG CGATCTTCCA CTCGTAGCAA GTAGTTTCCG CAATCAGCAA
ACCCTCAGTG ATTATCTCAA AGCGAACAAT GTTGTTGGCA TCGCAGATAT CGATACTCGT
AAATTAACTC GAATCCTCCG TGAAAAAGGT GCCCAAGCGG GTTGCATCAT GGCAGGTGCT
GACTTAGATG AAGCGAAAGC ACTGGCTGCG GCTAAAGCCT TCCCAGGTTT AAAGGGCATG
GATTTAGCAA AAGAAGTGAC GACTGACAAA GCTTACCCAT GGCGCAAGGG TAGCTGGCGT
TTAGTGGGCG GCTTGCCTGA AGATACACCT GCCGAAGCGC TGAAGTACAA AGTCGTTGCC
TACGATTATG GCGTTAAGCA AAACATCCTG CGTATGTTGG TTGACCGTGG CTGTGACGTC
ACCGTTGTTC CGGCAAAAAC ATCGGCTGCT GACGTGTTAG CGATGAACCC AGACGGTGTG
TTCCTCTCTA ACGGTCCTGG CGACCCAGAG CCATGCGACT ACGCGATTGA AGCGATTCAA
CAAATCCTGA AAACTGATAC GCCGATTTTC GGTATCTGTT TAGGCCACCA GTTACTGGCA
TTGGCATCAG GCGCGAAAAC CTTAAAGATG AAGTTTGGTC ACCACGGTGC TAACCACCCA
GTGAGCAATA TCGAAAAAGG TAACGTGATG ATCACCAGCC AAAACCACGG TTTTGCTGCC
GATGAAGCCA CATTACCTGC CAATATCAAA GTGACCCACA AGTCACTGTT CGATGGTTCA
CTGCAAGGTA TCCATCTAAC GGACAAACCT GCGTTCAGCT TCCAAGGTCA CCCTGAAGCG
AGCCCAGGTC CGAACGATGC GGCCCCACTG TTCGATCACT TTATCGAGCT TATTGAACAA
TACCGTCAGA ACGCTAAGTA A
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| Protein sequence | MEVALTKSAL LVLEDGTVFT GTAIGADGLS VGEVVFNTSM TGYQEILTDP SYSRQIVTLT
YPHIGNTGTN NEDVESNGVH ACGLIIRDLP LVASSFRNQQ TLSDYLKANN VVGIADIDTR
KLTRILREKG AQAGCIMAGA DLDEAKALAA AKAFPGLKGM DLAKEVTTDK AYPWRKGSWR
LVGGLPEDTP AEALKYKVVA YDYGVKQNIL RMLVDRGCDV TVVPAKTSAA DVLAMNPDGV
FLSNGPGDPE PCDYAIEAIQ QILKTDTPIF GICLGHQLLA LASGAKTLKM KFGHHGANHP
VSNIEKGNVM ITSQNHGFAA DEATLPANIK VTHKSLFDGS LQGIHLTDKP AFSFQGHPEA
SPGPNDAAPL FDHFIELIEQ YRQNAK
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