| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0451 |
|---|
| Symbol | |
|---|
| ID | 6119514 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | + |
|---|
| Start bp | 495747 |
|---|
| End bp | 496946 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641648521 |
|---|
| Product | carbamoyl phosphate synthase small subunit |
|---|
| Protein accession | YP_001775092 |
|---|
| Protein GI | 170729659 |
|---|
| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
|---|
| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.758109 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTCGAGC TTTCCTGCAA CCTGATTTCA GGCGGCGGCA TCGGTGTCCC AGGCAGCCAG
AGCGAGACTC CACCCGTGAC AGAACCCGCA ATCCTAGTTC TCGAAGACGG TACCGTATTC
GAGGGCGATG CTGTAGGCGC TAATGGGCTT TCCGTTGGTG AGGTGGTATT TAACACAGCC
CTCACTGGTT ATCAGGAGAT CCTGACCGAT CCTTCGTATG CGTACCAATT GGTCACCCTG
ACTTATCCGC ATATTGGCAA TACGGGTTGT ACCGATCAGG ATGATGAGGC GAATAAGGTA
TGGGCGGCTG GGCTGATTGT GCGGGATGTG CCGCGTCGTC CAAGCAATTG GCGCAGTCAG
ATTTCGTTGT CAGATTGGTT GGCCGCACGC GGTGTGGTTG CTATTGCTGG GATCGATACG
CGCAAACTGA CCCGTATTCT TCGTGAGAAA GGCGCTCAGC ATGGTGCGTT GATGGCTGGT
GAGATTGATG TTGGCAAGGC TCAGGATGCG GCCCGTCAAT TTGCAGGTAT CAAAGGTATG
GATTTAGCCA AAGTGGTCAG TACCAAACAG GGGTATTCTT GGTACGAAGG CCAGCTTGAC
TTGGATCGTA ACGAATTCAA GCGCGCCGCG CCGCAATATG AGGTTGTGGC CTATGATTAC
GGTGTGAAGC TCAATATTCT GCGGATGTTG GCGGAGCGTG GTTGTGATCT TACAGTGGTG
CCTGCGCAGA CTCCGGCTGA CGAGGTGTTG GCGCTCTGCC CGGATGGGGT GTTTCTTTCC
AATGGCCCAG GTGATCCAGA GCCTTGTGAT TATGCCGTTG CGGCGATTAA GACGTTCATC
ATGCGACGGG TTCCAATCTT CGGTATTTGT TTGGGTCATC AGTTGCTGGC CCAGGCTGTT
GGTGCCAGGG TCGTCAAAAT GAGCCATGGT CACCATGGTG CGAATCATCC GGTGCAGGAC
TTGCGCAGCG GGCGGGTAAT GATTACGTCG CAGAATCATG GCTTTGCTGT TGACGAGGCA
ACGTTGCCAA ACAATGTCAG GGTGACGCAT CGTTCGTTGT TCGACGGGAC CAATCAGGGG
ATTGAGTTGC TTGATGTGCC GGCATTCTCG TTTCAAGGGC ATCCGGAGGC TTCCCCTGGT
CCGCACGATG TTGATGTGTT GTTTGACAGG TTCATTACAA TGATGGCGGC TCAATCCTGA
|
|---|
| Protein sequence | MFELSCNLIS GGGIGVPGSQ SETPPVTEPA ILVLEDGTVF EGDAVGANGL SVGEVVFNTA
LTGYQEILTD PSYAYQLVTL TYPHIGNTGC TDQDDEANKV WAAGLIVRDV PRRPSNWRSQ
ISLSDWLAAR GVVAIAGIDT RKLTRILREK GAQHGALMAG EIDVGKAQDA ARQFAGIKGM
DLAKVVSTKQ GYSWYEGQLD LDRNEFKRAA PQYEVVAYDY GVKLNILRML AERGCDLTVV
PAQTPADEVL ALCPDGVFLS NGPGDPEPCD YAVAAIKTFI MRRVPIFGIC LGHQLLAQAV
GARVVKMSHG HHGANHPVQD LRSGRVMITS QNHGFAVDEA TLPNNVRVTH RSLFDGTNQG
IELLDVPAFS FQGHPEASPG PHDVDVLFDR FITMMAAQS
|
|---|
| |