| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3621 |
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| Symbol | |
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| ID | 5110082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3995698 |
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| End bp | 3996846 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640504876 |
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| Product | carbamoyl phosphate synthase small subunit |
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| Protein accession | YP_001189101 |
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| Protein GI | 146308636 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACTAAGC CAGCCCCCAA ACCTGCCATT TTGGCCCTTG CTGACGGCAG CATTTTTCGC
GGCGATTCCA TCGGGGCCGA TGGCCAGACG ATCGGAGAGG TGGTGTTCAA CACCGCCATG
ACCGGCTATC AGGAAATCCT CACCGATCCG TCCTATGCCC AGCAGATCGT CACCCTGACT
TACCCGCACA TCGGCAACAC CGGTACCACC CCGGAAGATG CCGAGTCCAA TCGCGTCTGG
GCTGCTGGCC TGATCATTCG CGACCTGCCG CTGATCTCCA GCAACTGGCG CGACAAGCAA
CCGCTGGACG AGTACCTGAA AGCGAACGGC ACCGTCGCCA TCGCCGGTAT CGATACCCGC
CGCCTGACCC GCATCCTGCG CGAGAAAGGC TCGCAGAACG GCTGCATCCT GGTCGGTGAC
GACGCCACCG AAGAGAAAGC GCTGGAACTG GCGCGCAGTT TCCCGGGCCT CAAGGGTATG
GACCTGGCCA AGGAAGTCAC CTGCGACAAG TCTTACGAGT GGCGCTCCAG CGTGTGGAAC
CTGGAAAGCG ACAGCCATCC GGAAATCGCC GCTGCCGACC TGCCGTATCA CGTGGTTGCC
TACGACTACG GCGTGAAGCT GAACATCCTG CGCATGCTGG TCGCCCGTGG CTGCCGCCTG
ACCGTGGTGC CGGCGCAGAC GCCGGCCAGT GAAGTGCTGG CCCTGAATCC CGATGGCGTG
TTTCTCTCCA ACGGCCCTGG CGACCCCGAG CCGTGCGACT ACGCGATCAA GGCGATCAAG
GAAATTCTGG AAACCGAGAT ACCGGTGTTC GGCATCTGCC TCGGCCACCA GCTGCTGGCC
CTGGCCTCCG GCGCTAAGAC CCTGAAGATG GGCCACGGCC ACCACGGTGC CAACCACCCG
GTGCAGGACC TGGATACCGG CGTGGTGATG ATCACCAGCC AGAACCACGG TTTCGCCGTG
GATGAAGGCA GCCTGCCGAG CAACCTGCGG CCGATCCACA AGTCGCTGTT CGACGGCACC
CTGCAGGGCA TCGAGCGTAC CGACAAGGAC GCCTTCAGCT TCCAGGGCCA CCCTGAGGCG
AGCCCCGGCC CGCACGACGT GGCCCCGCTG TTCGACCGCT TCATCGAAGC CATGGCCAAG
CGCCGCTAA
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| Protein sequence | MTKPAPKPAI LALADGSIFR GDSIGADGQT IGEVVFNTAM TGYQEILTDP SYAQQIVTLT
YPHIGNTGTT PEDAESNRVW AAGLIIRDLP LISSNWRDKQ PLDEYLKANG TVAIAGIDTR
RLTRILREKG SQNGCILVGD DATEEKALEL ARSFPGLKGM DLAKEVTCDK SYEWRSSVWN
LESDSHPEIA AADLPYHVVA YDYGVKLNIL RMLVARGCRL TVVPAQTPAS EVLALNPDGV
FLSNGPGDPE PCDYAIKAIK EILETEIPVF GICLGHQLLA LASGAKTLKM GHGHHGANHP
VQDLDTGVVM ITSQNHGFAV DEGSLPSNLR PIHKSLFDGT LQGIERTDKD AFSFQGHPEA
SPGPHDVAPL FDRFIEAMAK RR
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