More than 300 homologs were found in PanDaTox collection
for query gene Amir_1681 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_1681  binding-protein-dependent transport systems inner membrane component  100 
 
 
358 aa  699    Actinosynnema mirum DSM 43827  Bacteria  normal  0.471831  n/a   
 
 
-
 
NC_013440  Hoch_1482  oligopeptide/dipeptide ABC transporter, ATPase subunit  70.87 
 
 
727 aa  446  1.0000000000000001e-124  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2515  binding-protein-dependent transport systems inner membrane component  67.66 
 
 
331 aa  427  1e-118  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0878076  normal 
 
 
-
 
NC_013947  Snas_2621  binding-protein-dependent transport systems inner membrane component  63.86 
 
 
320 aa  390  1e-107  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1400  ABC transporter related  51.19 
 
 
638 aa  303  4.0000000000000003e-81  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.785888  normal  0.726008 
 
 
-
 
NC_013530  Xcel_0929  binding-protein-dependent transport systems inner membrane component  52.87 
 
 
350 aa  299  5e-80  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_1898  binding-protein-dependent transport systems inner membrane component  50 
 
 
331 aa  281  1e-74  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_20160  ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component  51.32 
 
 
621 aa  267  2e-70  Brachybacterium faecium DSM 4810  Bacteria  normal  0.533008  n/a   
 
 
-
 
NC_013526  Tter_2075  binding-protein-dependent transport systems inner membrane component  45.52 
 
 
344 aa  246  3e-64  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_01330  ABC-type dipeptide/oligopeptide/nickel transport system, permease component  47.42 
 
 
311 aa  247  3e-64  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0040  binding-protein-dependent transport systems inner membrane component  44.37 
 
 
320 aa  241  1e-62  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6186  ABC transporter related  46.76 
 
 
590 aa  238  1e-61  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2726  binding-protein-dependent transport systems inner membrane component  48.16 
 
 
303 aa  237  2e-61  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.576006 
 
 
-
 
NC_013521  Sked_34910  ABC-type dipeptide/oligopeptide/nickel transport system, permease component  43.85 
 
 
342 aa  231  1e-59  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_2395  binding-protein-dependent transport systems inner membrane component  39.02 
 
 
334 aa  231  1e-59  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013124  Afer_0173  binding-protein-dependent transport systems inner membrane component  46.26 
 
 
309 aa  225  9e-58  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.383419  n/a   
 
 
-
 
NC_012858  Rleg_6686  binding-protein-dependent transport systems inner membrane component  42.11 
 
 
292 aa  223  3e-57  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.340693  normal  0.469526 
 
 
-
 
NC_010003  Pmob_0480  binding-protein-dependent transport systems inner membrane component  43.28 
 
 
274 aa  222  8e-57  Petrotoga mobilis SJ95  Bacteria  normal  0.534309  n/a   
 
 
-
 
NC_013521  Sked_06410  ABC-type dipeptide/oligopeptide/nickel transport system, permease component  43.1 
 
 
320 aa  221  1.9999999999999999e-56  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.138967  normal 
 
 
-
 
NC_009457  VC0395_A0147  peptide ABC transporter, permease protein  37.37 
 
 
341 aa  217  2.9999999999999998e-55  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3402  binding-protein-dependent transport systems inner membrane component  43.45 
 
 
311 aa  215  7e-55  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_2743  binding-protein-dependent transport systems inner membrane component  43.79 
 
 
302 aa  214  9.999999999999999e-55  Ruegeria sp. TM1040  Bacteria  normal  0.418739  normal 
 
 
-
 
NC_013595  Sros_7458  peptide ABC transporter, permease protein  48.34 
 
 
281 aa  214  1.9999999999999998e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.48372 
 
 
-
 
NC_011366  Rleg2_5782  binding-protein-dependent transport systems inner membrane component  43.07 
 
 
292 aa  213  3.9999999999999995e-54  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.10252 
 
 
-
 
NC_008709  Ping_0547  peptide ABC transporter, protein inner membrane binding component  39.09 
 
 
327 aa  212  7e-54  Psychromonas ingrahamii 37  Bacteria  normal  0.0218475  normal 
 
 
-
 
NC_011312  VSAL_I2578  ABC-type [(GlcNAc)2] transporter, permease protein  36.03 
 
 
341 aa  207  2e-52  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_03425  hypothetical protein  36.45 
 
 
341 aa  204  3e-51  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011366  Rleg2_5670  binding-protein-dependent transport systems inner membrane component  41.95 
 
 
300 aa  201  9.999999999999999e-51  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_0400  binding-protein-dependent transport systems inner membrane component  39.93 
 
 
348 aa  201  1.9999999999999998e-50  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_002584  (GlcNAc)2 ABC transporter permease component 2  35.79 
 
 
341 aa  200  3e-50  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_0912  ABC-type dipeptide/oligopeptide/nickel transport systems, permease components  39.93 
 
 
304 aa  200  3.9999999999999996e-50  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_1180  binding-protein-dependent transport systems inner membrane component  38.97 
 
 
336 aa  198  1.0000000000000001e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_3655  binding-protein-dependent transport systems inner membrane component  37.54 
 
 
302 aa  189  5e-47  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009718  Fnod_1555  binding-protein-dependent transport systems inner membrane component  40.67 
 
 
280 aa  189  8e-47  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.0590918  n/a   
 
 
-
 
NC_009486  Tpet_1547  binding-protein-dependent transport systems inner membrane component  38.01 
 
 
285 aa  187  2e-46  Thermotoga petrophila RKU-1  Bacteria  normal  0.107676  n/a   
 
 
-
 
NC_010483  TRQ2_1597  binding-protein-dependent transport systems inner membrane component  38.01 
 
 
282 aa  188  2e-46  Thermotoga sp. RQ2  Bacteria  normal  0.951442  n/a   
 
 
-
 
NC_002936  DET1492  peptide ABC transporter, permease protein  36.4 
 
 
279 aa  183  4.0000000000000006e-45  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_1282  binding-protein-dependent transport systems inner membrane component  36.4 
 
 
279 aa  183  4.0000000000000006e-45  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_21760  ABC-type dipeptide/oligopeptide/nickel transport system, permease component  37.33 
 
 
310 aa  179  4.999999999999999e-44  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0612673  n/a   
 
 
-
 
NC_010003  Pmob_0490  binding-protein-dependent transport systems inner membrane component  36.43 
 
 
277 aa  177  4e-43  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_1268  ABC-type dipeptide/oligopeptide/nickel transport systems, permease component  36.43 
 
 
279 aa  176  8e-43  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_0264  binding-protein-dependent transport systems inner membrane component  38.44 
 
 
299 aa  172  9e-42  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.502248  n/a   
 
 
-
 
NC_008553  Mthe_1035  binding-protein-dependent transport systems inner membrane component  36.19 
 
 
276 aa  170  3e-41  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_007355  Mbar_A1613  oligopeptide ABC transporter, permease protein  34.21 
 
 
319 aa  165  9e-40  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_013924  Nmag_3994  binding-protein-dependent transport systems inner membrane component  34.42 
 
 
325 aa  165  1.0000000000000001e-39  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_009712  Mboo_2379  binding-protein-dependent transport systems inner membrane component  35.5 
 
 
273 aa  164  3e-39  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.141415  normal 
 
 
-
 
NC_011661  Dtur_0216  binding-protein-dependent transport systems inner membrane component  33.71 
 
 
280 aa  162  1e-38  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.0346829  n/a   
 
 
-
 
NC_013926  Aboo_1253  binding-protein-dependent transport systems inner membrane component  37.37 
 
 
305 aa  162  1e-38  Aciduliprofundum boonei T469  Archaea  normal  0.95778  n/a   
 
 
-
 
NC_013172  Bfae_17740  ABC-type dipeptide/oligopeptide/nickel transport system, permease component  34.23 
 
 
331 aa  160  3e-38  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00436739  n/a   
 
 
-
 
CP001800  Ssol_0801  binding-protein-dependent transport systems inner membrane component  34.74 
 
 
321 aa  158  1e-37  Sulfolobus solfataricus 98/2  Archaea  normal  0.187971  n/a   
 
 
-
 
NC_012918  GM21_1592  binding-protein-dependent transport systems inner membrane component  36.56 
 
 
280 aa  151  2e-35  Geobacter sp. M21  Bacteria  n/a    normal  0.961775 
 
 
-
 
NC_013922  Nmag_1436  binding-protein-dependent transport systems inner membrane component  32.34 
 
 
314 aa  151  2e-35  Natrialba magadii ATCC 43099  Archaea  normal  0.289557  n/a   
 
 
-
 
NC_007802  Jann_4129  binding-protein-dependent transport systems inner membrane component  34.73 
 
 
312 aa  150  3e-35  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_2642  binding-protein-dependent transport systems inner membrane component  37.28 
 
 
280 aa  149  5e-35  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2747  binding-protein-dependent transport systems inner membrane component  34.32 
 
 
288 aa  149  9e-35  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_0011  binding-protein-dependent transport systems inner membrane component  34.1 
 
 
307 aa  149  1.0000000000000001e-34  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_4403  binding-protein-dependent transport systems inner membrane component  35.83 
 
 
311 aa  148  2.0000000000000003e-34  Polaromonas sp. JS666  Bacteria  normal  normal  0.292723 
 
 
-
 
NC_009486  Tpet_0487  binding-protein-dependent transport systems inner membrane component  31.65 
 
 
284 aa  147  2.0000000000000003e-34  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0897  binding-protein-dependent transport systems inner membrane component  34.77 
 
 
303 aa  147  2.0000000000000003e-34  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008751  Dvul_0778  binding-protein-dependent transport systems inner membrane component  36.84 
 
 
300 aa  148  2.0000000000000003e-34  Desulfovibrio vulgaris DP4  Bacteria  normal  0.0620007  normal  0.517219 
 
 
-
 
NC_009486  Tpet_0894  binding-protein-dependent transport systems inner membrane component  34.17 
 
 
280 aa  146  5e-34  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0916  binding-protein-dependent transport systems inner membrane component  34.17 
 
 
280 aa  146  5e-34  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0921  binding-protein-dependent transport systems inner membrane component  34.41 
 
 
284 aa  145  8.000000000000001e-34  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.399737 
 
 
-
 
NC_007519  Dde_2594  oligopeptide ABC transporter, permease protein  34.47 
 
 
285 aa  145  1e-33  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0633  binding-protein-dependent transport systems inner membrane component  37.55 
 
 
340 aa  144  2e-33  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.705479 
 
 
-
 
NC_010718  Nther_2198  binding-protein-dependent transport systems inner membrane component  33.57 
 
 
290 aa  143  4e-33  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.00106936  normal 
 
 
-
 
NC_008009  Acid345_1395  ABC peptide transporter, inner membrane subunit  37.13 
 
 
288 aa  143  4e-33  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.064701  decreased coverage  0.00784209 
 
 
-
 
NC_010483  TRQ2_0874  binding-protein-dependent transport systems inner membrane component  35.81 
 
 
284 aa  143  4e-33  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2052  binding-protein-dependent transport systems inner membrane component  37.09 
 
 
280 aa  143  5e-33  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0851  binding-protein-dependent transport systems inner membrane component  35.37 
 
 
284 aa  142  6e-33  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013743  Htur_1412  binding-protein-dependent transport systems inner membrane component  31.62 
 
 
306 aa  143  6e-33  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_009486  Tpet_1597  binding-protein-dependent transport systems inner membrane component  34.46 
 
 
287 aa  142  8e-33  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1236  binding-protein dependent transport system inner membrane protein  37.23 
 
 
284 aa  142  8e-33  Geobacter metallireducens GS-15  Bacteria  normal  0.143707  normal  0.209567 
 
 
-
 
NC_007947  Mfla_1485  binding-protein-dependent transport systems inner membrane component  35.9 
 
 
274 aa  142  8e-33  Methylobacillus flagellatus KT  Bacteria  normal  0.0146821  normal  0.125484 
 
 
-
 
NC_008698  Tpen_1678  binding-protein-dependent transport systems inner membrane component  33.57 
 
 
289 aa  142  8e-33  Thermofilum pendens Hrk 5  Archaea  normal  0.771808  n/a   
 
 
-
 
NC_013947  Snas_1138  binding-protein-dependent transport systems inner membrane component  31.58 
 
 
290 aa  141  9.999999999999999e-33  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.204889 
 
 
-
 
NC_013739  Cwoe_2947  binding-protein-dependent transport systems inner membrane component  34.12 
 
 
300 aa  142  9.999999999999999e-33  Conexibacter woesei DSM 14684  Bacteria  normal  0.456335  normal  0.0430362 
 
 
-
 
NC_008609  Ppro_2013  binding-protein-dependent transport systems inner membrane component  38.55 
 
 
285 aa  142  9.999999999999999e-33  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_1663  binding-protein-dependent transport systems inner membrane component  34.46 
 
 
287 aa  141  1.9999999999999998e-32  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0629  binding-protein-dependent transport systems inner membrane component  32.48 
 
 
289 aa  141  1.9999999999999998e-32  Thermotoga sp. RQ2  Bacteria  normal  0.709425  n/a   
 
 
-
 
NC_010814  Glov_2032  binding-protein-dependent transport systems inner membrane component  37.25 
 
 
285 aa  140  3.9999999999999997e-32  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_4520  binding-protein-dependent transport systems inner membrane component  33.79 
 
 
301 aa  140  3.9999999999999997e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.20807  normal  0.604183 
 
 
-
 
NC_010483  TRQ2_1621  binding-protein-dependent transport systems inner membrane component  34.51 
 
 
291 aa  139  4.999999999999999e-32  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.00767174  n/a   
 
 
-
 
NC_002939  GSU1435  peptide ABC transporter, permease protein  37.15 
 
 
282 aa  139  6e-32  Geobacter sulfurreducens PCA  Bacteria  normal  0.557175  n/a   
 
 
-
 
NC_007643  Rru_A1919  binding-protein dependent transport system inner membrane protein  34.66 
 
 
310 aa  139  6e-32  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.307176  n/a   
 
 
-
 
NC_010003  Pmob_0236  binding-protein-dependent transport systems inner membrane component  32.97 
 
 
286 aa  139  6e-32  Petrotoga mobilis SJ95  Bacteria  normal  0.0893446  n/a   
 
 
-
 
NC_010718  Nther_2390  binding-protein-dependent transport systems inner membrane component  34.64 
 
 
306 aa  139  7e-32  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_2549  binding-protein-dependent transport systems inner membrane component  35.84 
 
 
344 aa  139  8.999999999999999e-32  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_007355  Mbar_A0928  oligopeptide ABC transporter, permease protein  34.54 
 
 
274 aa  138  1e-31  Methanosarcina barkeri str. Fusaro  Archaea  decreased coverage  0.00180433  normal 
 
 
-
 
NC_013521  Sked_16510  ABC-type dipeptide/oligopeptide/nickel transport system, permease component  34.94 
 
 
321 aa  139  1e-31  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.341434  normal  0.69344 
 
 
-
 
NC_012880  Dd703_0951  binding-protein-dependent transport systems inner membrane component  35.87 
 
 
275 aa  138  2e-31  Dickeya dadantii Ech703  Bacteria  normal  0.24114  n/a   
 
 
-
 
NC_004578  PSPTO_3250  dipeptide ABC transporter, permease protein DppC, putative  31.49 
 
 
301 aa  137  2e-31  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.193894  n/a   
 
 
-
 
NC_009767  Rcas_0904  binding-protein-dependent transport systems inner membrane component  34.27 
 
 
283 aa  137  2e-31  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.639488  normal 
 
 
-
 
NC_012917  PC1_3865  binding-protein-dependent transport systems inner membrane component  31.02 
 
 
307 aa  137  3.0000000000000003e-31  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009954  Cmaq_0684  binding-protein-dependent transport systems inner membrane component  31.69 
 
 
298 aa  137  4e-31  Caldivirga maquilingensis IC-167  Archaea  normal  normal  0.0527807 
 
 
-
 
NC_009783  VIBHAR_02947  hypothetical protein  30.96 
 
 
302 aa  137  4e-31  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013441  Gbro_0269  ABC transporter related protein  35.08 
 
 
867 aa  137  4e-31  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_0548  binding-protein-dependent transport systems inner membrane component  32.85 
 
 
310 aa  136  6.0000000000000005e-31  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_0621  binding-protein-dependent transport systems inner membrane component  32.85 
 
 
310 aa  136  6.0000000000000005e-31  Thermoanaerobacter sp. X514  Bacteria  normal  0.0465132  n/a   
 
 
-
 
NC_011899  Hore_13060  binding-protein-dependent transport systems inner membrane component  32.88 
 
 
485 aa  135  9.999999999999999e-31  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
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